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Brucella Genomes
Genome Analysis
Protein Domains
Host-Brucella interaction
General Information
Gene Query
Virulence Factors
Interaction Network
Brucella as a Hazard
Gene Expression
Brucella Phix
MacroPath
Brucella Literature
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BruMeSH
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Brucellosis Ontology
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Documentation

BBP Work Flow:

Databases and software programs integrated in BBP:

Resources Databases and analysis programs Comments
Databases
NCBI PubMed (ref.) Biomedical publications
MeSH Medical Subject Headings
RefSeq Reference sequences
Genome Genome summary
Gene Gene information
Protein Protein information
Nucleotide Nucleotide information
CDD conserved domains
COGs clusters of orthologous groups
Taxonomy Brucella taxonomy information
3D structure DB 3D structures (typically of related proteins)
Feature tables Protein coding genes, functional and structural RNAs,

EBI & SIB

Swissprot Annotated protein data
TrEMBL protein data
InterPro protein families, domains and functions
PROSITE protein families and domains

TIGR

CMR codon usage, EC numbers, condensed genome display, role category graph, GO terms, gene attribute, Role category gene list, RNAs, terminators
TIGRfam TIGRfam assignments
  PFam protein domains and families
  ProDom protein domain families
Software programs integrated
NCBI BLAST Blastn, blastp, blastx, tblastn, tblastx, PSI/PHI Blast, Mega Blast, Blast 2 sequences
GMOD GBrowse genome browse and analysis
TextPresso NLP text mining
PubSearch literature curation management
  BioPerl Programming tools
More external links
  MBGD Microbial Genome Database for Comparative Analysis

Click here for a Brucella gene information search tutorial

Click here for frequently asked questions and answers

Disclaimer:

The BBP team has made every effort possible to ensure that the information in our database is current and accurate. We try to provide references and links for all the information collected here. We accept no responsibility for the accuracy, sufficiency, or reliability or for any loss and mistakes resulting from the use of the information. The information in our database may not be completely up to date.