Search: for Help
About
Introduction
Statistics
Your PHIDIAS
Register or Login
Philert
Submission
Curated Data
Victors
BBP (Brucella)
Phinfo
Phinet
HazARD
Data Analysis
Phigen
Pacodom
BLAST
Help & Documents
Documents
FAQs
Links
Acknowledgements
Disclaimer
Contact Us
UMMS Logo

sodB from Shigella flexneri 2a str. 2457T

Victor ID 942
Gene Name sodB from Shigella flexneri 2a str. 2457T
Sequence Strain (Species/Organism) Shigella flexneri 2a str. 2457T
NCBI Gene ID 1079354
NCBI Protein GI 30063172
Locus Tag S1816
Protein Accession NP_837343.1
Other Database IDs UniProtKB-ID: SODF_SHIFL
UniRef100: UniRef100_P0AGD5
UniRef90: UniRef90_P0AGD5
UniRef50: UniRef50_P0A2F5
UniParc: UPI00001639C0
EMBL: AE005674
EMBL: AE014073
EMBL-CDS: AAN43263.1
EMBL-CDS: AAP17152.1
RefSeq_NT: NC_004337.1
RefSeq_NT: NC_004741.1
EnsemblGenome: EBESCG00000087434
EnsemblGenome_TRS: EBESCT00000088389
EnsemblGenome_PRO: EBESCP00000085211
EnsemblGenome: EBESCG00000089891
EnsemblGenome_TRS: EBESCT00000090847
EnsemblGenome_PRO: EBESCP00000087483
GenomeReviews: AE005674_GR
GenomeReviews
Taxonomy ID 198215
Gene Starting Position 1754672
Gene Ending Position 1755253
Gene Strand (Orientation) +
Protein Name superoxide dismutase
DNA Sequence
>gi|30061571:1754672-1755253 Shigella flexneri 2a str. 2457T, complete genome
AATGTCATTCGAATTACCTGCACTACCATATGCTAAAGATGCTCTGGCACCGCACATTTCTGCGGAAACT
ATCGAGTATCACTACGGCAAGCATCATCAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCG
CGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAAGGTGGCGTATTCAACAACGCAGCTCA
GGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGACTGGAAAAGTC
GCTGAAGCTATCGCCGCATCTTTTGGCAGCTTTGCCGATTTCAAAGCGCAGTTTACTGATGCAGCGATCA
AAAACTTTGGTTCTGGCTGGACCTGGCTGGTGAAAAACAGCGATGGCAAACTGGCTATCGTTTCAACCTC
TAACGCGGGTACTCCGCTGACCACCGATGCGACTCCGCTGCTGACCGTTGATGTCTGGGAACACGCTTAT
TACATCGACTATCGCAATGCACGTCCTGGCTATCTGGAGCACTTCTGGGCGCTGGTGAACTGGGAATTCG
TAGCGAAAAATCTCGCTGCATA
Protein Sequence
>gi|30063172|ref|NP_837343.1| superoxide dismutase [Shigella flexneri 2a str. 2457T] MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: sodB mutant is extremely sensitive to killing by phagocytes compared to the wild-type, and causes only mild damage in infection of rabbit ileal loops (Franzon et al., 1990).
COG COG0605P, under P: Inorganic ion transport and metabolism
References
Franzon et al., 1990: Franzon VL, Arondel J, Sansonetti PJ. Contribution of superoxide dismutase and catalase activities to Shigella flexneri pathogenesis. Infection and immunity. 1990; 58(2); 529-535. [PubMed: 2404874].