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ompA from Mycobacterium tuberculosis H37Rv

Victor ID 92
Gene Name ompA from Mycobacterium tuberculosis H37Rv
Sequence Strain (Species/Organism) Mycobacterium tuberculosis H37Rv
NCBI Gene ID 885286
NCBI Protein GI 15608039
Locus Tag Rv0899
Protein Accession NP_215414.1
Other Database IDs UniProtKB-ID: Y899_MYCTU
UniRef100: UniRef100_P65593
UniRef90: UniRef90_P65593
UniRef50: UniRef50_P65593
UniParc: UPI0000139DDD
EMBL: BX842574
EMBL: AE000516
EMBL-CDS: CAA97374.1
EMBL-CDS: AAK45169.1
RefSeq_NT: NC_000962.2
RefSeq_NT: NC_002755.2
PDB: 2KGS
PDB: 2KGW
PDB: 2KSM
TCDB: 1.B.6.1.3
EnsemblGenome: EBMYCG00000001562
EnsemblGenome_TRS: EBMYCT00000001562
EnsemblGenome_PRO: EBMYCP00000001562
EnsemblGenome: EBMYCG00000069811
EnsemblGenome_TRS: EBMYCT00000069816
EnsemblGenome_PRO: EBMYCP000000
Taxonomy ID 83332
Gene Starting Position 1002811
Gene Ending Position 1003791
Gene Strand (Orientation) +
Protein Name OUTER MEMBRANE PROTEIN A OMPA
DNA Sequence
>gi|57116681:1002811-1003791 Mycobacterium tuberculosis H37Rv, complete genome
AGTGGCTTCTAAGGCGGGTTTGGGCCAAACACCCGCGACCACCGACGCGCGACGAACTCAGAAATTCTAC
CGGGGCTCGCCGGGCCGTCCGTGGCTGATTGGCGCGGTGGTTATTCCGTTGCTGATAGCGGCAATCGGTT
ACGGTGCATTCGAGCGGCCCCAGTCCGTTACCGGACCGACCGGTGTGTTGCCGACACTGACACCGACCAG
CACCCGGGGCGCTTCTGCGTTGTCCTTGTCTTTGCTGTCAATTAGCCGCAGCGGCAACACCGTTACTCTG
ATCGGTGACTTCCCCGATGAGGCCGCCAAGGCGGCCTTGATGACGGCGCTCAACGGCTTGCTTGCTCCGG
GCGTGAACGTCATCGACCAGATTCACGTCGATCCCGTTGTGCGATCACTTGATTTCTCAAGTGCGGAACC
AGTTTTCACCGCCAGCGTGCCGATTCCTGATTTTGGCCTCAAAGTCGAAAGGGACACCGTCACCTTGACC
GGAACTGCCCCTTCATCCGAGCACAAGGACGCAGTGAAGCGCGCGGCGACCAGCACCTGGCCTGACATGA
AAATCGTTAACAATATTGAGGTTACGGGGCAGGCACCGCCAGGACCCCCGGCCTCCGGCCCATGTGCCGA
CCTGCAATCAGCCATCAATGCCGTGACGGGTGGACCCATCGCGTTTGGCAACGACGGGGCTAGTCTGATC
CCAGCCGACTATGAAATCCTGAACCGGGTAGCCGACAAGCTCAAGGCATGTCCGGACGCTCGGGTGACGA
TCAACGGCTACACCGACAACACCGGCAGCGAAGGTATCAATATCCCGTTGAGCGCTCAGCGAGCCAAGAT
AGTCGCCGACTACCTGGTTGCCCGCGGAGTTGCCGGCGATCACATTGCCACCGTGGGTCTCGGTTCGGTG
AATCCGATCGCCAGCAACGCCACACCCGAGGGGCGCGCCAAGAATCGTCGCGTCGAGATCGTGGTCAACT
A
Protein Sequence
>gi|15608039|ref|NP_215414.1| peptidoglycan-binding protein ArfA [Mycobacterium tuberculosis H37Rv] MASKAGLGQTPATTDARRTQKFYRGSPGRPWLIGAVVIPLLIAAIGYGAFERPQSVTGPTGVLPTLTPTSTRGASALSLSLLSISRSGNTVTLIGDFPDEAAKAALMTALNGLLAPGVNVIDQIHVDPVVRSLDFSSAEPVFTASVPIPDFGLKVERDTVTLTGTAPSSEHKDAVKRAATSTWPDMKIVNNIEVTGQAPPGPPASGPCADLQSAINAVTGGPIAFGNDGASLIPADYEILNRVADKLKACPDARVTINGYTDNTGSEGINIPLSAQRAKIVADYLVARGVAGDHIATVGLGSVNPIASNATPEGRAKNRRVEIVVN
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: ompA mutant is impaired in its ability to grow in macrophages and in normal mice, although it was as virulent as the wild type in mice that lack T cells (Raynaud et al., 2002).
COG COG2885M, under M: Cell wall/membrane/envelope biogenesis
References
Raynaud et al., 2002: Raynaud C, Papavinasasundaram KG, Speight RA, Springer B, Sander P, Böttger EC, Colston MJ, Draper P. The functions of OmpATb, a pore-forming protein of Mycobacterium tuberculosis. Molecular microbiology. 2002; 46(1); 191-201. [PubMed: 12366842].