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hfq from Yersinia pestis KIM 10

Victor ID 761
Gene Name hfq from Yersinia pestis KIM 10
Sequence Strain (Species/Organism) Yersinia pestis KIM 10
NCBI Gene ID 1145577
NCBI Protein GI 22124544
Locus Tag y0630
Protein Accession NP_667967.1
Other Database IDs UniProtKB-ID: HFQ_YERPE
UniRef100: UniRef100_A7FMX9
UniRef90: UniRef90_A8G8U9
UniRef50: UniRef50_A4W5R3
UniParc: UPI0000165AE8
EMBL: AL590842
EMBL: AE009952
EMBL: AE017042
EMBL-CDS: CAL19055.1
EMBL-CDS: AAM84218.1
EMBL-CDS: AAS60799.1
RefSeq_NT: NC_004088.1
RefSeq_NT: NC_005810.1
RefSeq_NT: NC_003143.1
GenomeReviews: AE009952_GR
GenomeReviews: AE017042_GR
GenomeReviews: AL590842_GR
KEGG: ype:YPO0373
KEGG: ypk:y0630
KEGG: ypm:YP_0529
HOGENOM: HBG645207
OMA: KNTVTQM
ProtClustDB: PRK00395
BioCyc: Y
Taxonomy ID 187410
Gene Starting Position 713303
Gene Ending Position 713608
Gene Strand (Orientation) +
Protein Name RNA-binding protein Hfq
DNA Sequence 
>gi|22123922:713303-713608 Yersinia pestis KIM 10 chromosome, complete genome
AATGGCTAAGGGGCAATCTTTGCAAGATCCGTTCCTGAACGCATTGCGTCGTGAACGGGTTCCGGTTTCT
ATTTATTTAGTGAATGGTATTAAACTGCAGGGCCAAGTTGAGTCTTTTGATCAGTTTGTCATTCTGTTAA
AAAATACAGTCAGCCAGATGGTTTATAAGCACGCCATCTCTACTGTTGTGCCTTCTCGTCCGGTTTCGCA
TCACAGCAATACTCCGAGCGGTAGCACCAATAATTATCATGGTAGTAATCCGTCTGCGCCGCAACAGCCG
CAGCAGGACAGTGATGACGCTGAATA
Protein Sequence 
>gi|22124544|ref|NP_667967.1| RNA-binding protein Hfq [Yersinia pestis KIM10+] MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQVESFDQFVILLKNTVSQMVYKHAISTVVPSRPVSHHSNTPSGSTNNYHGSNPSAPQQPQQDSDDAE
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: hfq mutant is highly attenuated in mice after subcutaneous or intravenous injection and has attenuated survival in macrophages (Geng et al., 2009).
COG COG1923R, under R: General function prediction only
References
Geng et al., 2009: Geng J, Song Y, Yang L, Feng Y, Qiu Y, Li G, Guo J, Bi Y, Qu Y, Wang W, Wang X, Guo Z, Yang R, Han Y. Involvement of the post-transcriptional regulator Hfq in Yersinia pestis virulence. PloS one. 2009; 4(7); e6213. [PubMed: 19593436].