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deaD

Victor ID 620
Gene Name deaD
Sequence Strain (Species/Organism) Francisella tularensis
NCBI Gene ID 3191508
NCBI Protein GI 56708511
Locus Tag FTT1471c
Protein Accession YP_170407.1
Other Database IDs UniProtKB-ID: Q5NEY5_FRATT
UniRef100: UniRef100_Q14GD8
UniRef90: UniRef90_B0U160
UniRef50: UniRef50_B0U160
UniParc: UPI000049C551
EMBL: AJ749949
EMBL-CDS: CAG46104.1
RefSeq_NT: NC_006570.2
GenomeReviews: AJ749949_GR
HOGENOM: HBG737336
OMA: IIIFVRT
ProtClustDB: CLSK935043
Taxonomy ID 177416
Gene Starting Position 1522497
Gene Ending Position 1524206
Gene Strand (Orientation) -
Protein Name Cold-shock DEAD-box protein A
DNA Sequence 
>gi|56707187:1522497-1524206 Francisella tularensis subsp. tularensis Schu 4, complete genome
CTTACTGAGCAGTAAGATTTAACTTCTTCCCAGCAACCCAAACTTTTTTTAGATGATTTATCACTTTTGG
TGAAAGATTTGCTGGTAAATCAACTAATGTATAATCTTTTTGAATAGAGATATTACAGATATGTTTACTA
TCGATATTACCCTCATTAGCTATAGCACCAACAATATTTCGTGCTTGAACATCATTATCACGACCAACAT
CTAACTTATAAGTAGTTAGATCGATATTTACAGCACGACGTGGCTTTCTATCTGCTTTATCAAAACGTTT
AGTTCTATCACCTTGATCATTTCTACGCTCAAATCTTTCATTTCTTCTACCATCTCTAGAATTTCTATTA
TCACGAGCTGGTTTTTCTTCTTTAGCTTGAATTTCTTTTGGGAAGAAAGTTTTCTTACCTTGAGCTAGTA
ATGTAAGTCCAGCTAAAAGCTCTTCTGAGTCTAACTGTAATTCATCACGAATACTTGTAATAATTTCTTT
ATACTTATCTAAAGACTTATTTTTATCCAATGCTGAGATTATTCTAGCTTTAAAGTGTTCTACCCTGCTT
TGAGCTAACTCTTTAGCACTTGGCATAAATACTTCTTGCATTGGTGAACCTGTAAATCTCTCTAAAGTAC
GTAAAAATCTCATCTCTTTAAGAGGTACTAAAGAAATTGACGTGCCTTCACGCCCTGCTCTACCTGTACG
CCCAATTCTATGTACATATGTATCAGTATCATTAGGCATATCATAGTTAATCACATGACTAATACGTTCA
AGATCTATACCCCTAGCTACTACATCTGTAGCAACGAGGATATCGGATTTAGCACTTCTGAATTGATCAA
CAATATACTCACGCTGTGATTGTTGCATATCGCCATTTATAGCTGCTACTTTATAGCCAAGAGCTTTTAA
ATTATCTGCTACTTCTATAGTACTTGTCTTAGTCTTAACAAAGATAATAACACCGTCAGTTTCTTCGGTC
TCAAGCAACCTATCTAAAGCATCTATCTTTCTAAAGCCTTTAATGACGATAAATTTTTGTGTCACTGTAT
TAGCAGTTTTTGTTTTCGCTTTCACTTGTATCTTACAAGGATTTCTTAGATATTCTTCGATAATATCAGC
AATATCAGTAGGAATTGTTGCTGAGAAAAGTAATCTTTGGCATTGTTCAGAAACATGACTTAAGACAAAT
TTAACATCATCAATAAAGCCCATTCTGAGCATCTCATCTGCTTCATCTAATACTAATGCTCTAAGATTAT
CAAGCTGTAATGTACCTTTCTCAATATGATCCATTACTCGACCAGTTGTACCAACTACAACTTTTACACC
TTGCTTAAGTGCTCTTATTTGAGAACCATATTCTTGACCACCATAAATACAAGCAACATCTAAATTAGGT
ACATTTTTAGCAAAAGCTTCAAACTGCTCCGCCACTTGTATAGCTAACTCTCTTGTAGGTGCTAGTACCA
AAACTTGTGGAGCTCTATCTCTAGATGCCAAGTCCATGTTATTTATTAGAGGTAATGCAAAAGCTGCTGT
TTTGCCCGTACCCGTTTGTGCTTGACCTAGCACATCTCTACCCGATAAGATATATGGAATAGCATACTGT
TGGATAGGTGTTGGATTTTCATATCCTAGTTTAATAACAGTATCTACAATATCTTGATTCAGCCCAAGCT
GACTAAAATCTTTTTTAGTTTCAGAATTCA
Protein Sequence 
>gi|56708511|ref|YP_170407.1| cold-shock DEAD-box protein A [Francisella tularensis subsp. tularensis SCHU S4] MNSETKKDFSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINNMDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGSQIRALKQGVKVVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEMLRMGFIDDVKFVLSHVSEQCQRLLFSATIPTDIADIIEEYLRNPCKIQVKAKTKTANTVTQKFIVIKGFRKIDALDRLLETEETDGVIIFVKTKTSTIEVADNLKALGYKVAAINGDMQQSQREYIVDQFRSAKSDILVATDVVARGIDLERISHVINYDMPNDTDTYVHRIGRTGRAGREGTSISLVPLKEMRFLRTLERFTGSPMQEVFMPSAKELAQSRVEHFKARIISALDKNKSLDKYKEIITSIRDELQLDSEELLAGLTLLAQGKKTFFPKEIQAKEEKPARDNRNSRDGRRNERFERRNDQGDRTKRFDKADRKPRRAVNIDLTTYKLDVGRDNDVQARNIVGAIANEGNIDSKHICNISIQKDYTLVDLPANLSPKVINHLKKVWVAGKKLNLTAQ
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: a deaD mutant was attenuated for infection in a mosue lung (Su et al., 2007)
COG COG0513LKJ, under L: Replication, recombination and repair; K: Transcription; J: Translation, ribosomal structure and biogenesis
References
Su et al., 2007: Su J, Yang J, Zhao D, Kawula TH, Banas JA, Zhang JR. Genome-wide identification of Francisella tularensis virulence determinants. Infection and immunity. 2007; 75(6); 3089-3101. [PubMed: 17420240].