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lmo0415 |
| Victor ID |
544 |
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Gene Name |
lmo0415 |
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Sequence Strain (Species/Organism) |
Listeria monocytogenes EGD-e |
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NCBI Gene ID |
987823
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NCBI Protein GI |
16802459
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Locus Tag |
lmo0415 |
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Protein Accession |
NP_463944.1 |
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Other Database IDs |
UniProtKB-ID: Q8Y9V5_LISMO
UniRef100: UniRef100_C8KF26
UniRef90: UniRef90_Q723P3
UniRef50: UniRef50_Q723P3
UniParc: UPI00000CF0C5
EMBL: AL591975
EMBL-CDS: CAC98494.1
RefSeq_NT: NC_003210.1
HSSP: O34928
GenomeReviews: AL591824_GR
KEGG: lmo:lmo0415
GenoList: LMO0415
HOGENOM: HBG532761
OMA: RWIRISL
ProtClustDB: CLSK563915
BioCyc: LMON169963:LMO0415-MONOMER
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Taxonomy ID |
169963
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Gene Starting Position |
437481 |
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Gene Ending Position |
438881 |
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Gene Strand (Orientation) |
+ |
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Protein Name |
similar to endo-1,4-beta-xylanase |
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DNA Sequence |
>gi|16802048:437481-438881 Listeria monocytogenes EGD-e, complete genome
TGTGAAAATTAGGTGGATTAGACTTTCACTAGTTGCCATTCTCATTATTGCCGTGGTTTTTATTGGTGTA
ATAGGTTTCCAAAAATACCAATTTTCAAAGTCGCGCAACAAAGTAATAATGCAGATGGACAGACTAATGA
AAGACCAGGATGGAGGAAATTTCCGCCGCTTGGATAAGAAAGAAAATGGAGTGGAAATCATTTCTTACAT
TCCTAAAACAACTGAGAAAAAAGACAACGAAATTATCCAAAAAGAAATTGGAAAGGCCACAGATGCAGAG
GTTAAAAAGTTAAATAGAGATAAAGAAACTCAAGGGATTATTTTTTACACTTACCAAAAGCATAGAATGG
CCGAGCAAGCAATATCTTACAAAGCAGTTCAATCGGAGTACGTAAAAGAAGGAAGAACTAAATTTGTACT
CAAAGATAAAAAAGATATTTGCAAAAACATAGTAACCGACGCAGAAACAGGTGCTTTGTTAACACTTGGG
GAAGTATTAATAAAAAGTAATCAAACTAAATTAAACTTAAAAACAGCTGTTGAAGAAGAATTGATTAAAA
CAGGGGATTTTTCTTTAAAAGATGTTGGTAATCTTGGGAAAATTAAGAGTTTAGTGAAATGGAATCAAAC
GGATTTCGAAATCACGAACTCTGAAATTATTTTGCCAGTAAAAATACCAGGTGCACCGGAACCGAAGAAA
GTAAAAGTAAAACTTGCTGATATTGCTAGTTCTGTGAATAAACGCTACTTACCAAGCAGTGTGAAAGTTC
CAGAAGTGCCAAAAGCAAAAACGAACAAACGAATTGCCCTTACTTTTGATGATGGTCCAAGTTCCTCGGT
AACACCAGGCGTACTTGATACATTGAAACGCCACAATGTAAAAGCGACATTCTTTGTACTTGGCTCTAGT
GTCATACAAAATCCAGGTTTAGTAAAACGTGAATTAGAGGAAGGGCACCAAGTTGGCAGCCACTCATGGG
ATCACCCGCAATTAACTAAACAATCGACACAAGAAGTGTACAACCAAATTTTAAAAACGCAAAAAGCAGT
ATTTGATCAAACTGGATATTTTCCAACGACAATGCGCCCTCCATATGGTGCAGTAAACAAACAGGTTGCT
GAAGAGATTGGTCTTCCGATAATACAGTGGTCTGTTGATACAGAAGATTGGAAATACAGAAATGCTGGTA
TAGTGACGAAGAAAGTCCTTGCAGGCGCAACGGACGGAGCGATTGTACTAATGCATGATATCCATAAAAC
TACTGCTGCAAGCCTTGACACTACATTGACTAAATTAAAGAGTCAAGGATACGAGTTTGTTACGATTGAT
GAACTTTATGGCGAGAAATTGCAAATTGGGAAGCAATATTTCGACAAAACAGATTCAAGAATGGTGAAAT
A
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Protein Sequence |
>gi|16802459|ref|NP_463944.1| endo-1,4-beta-xylanase [Listeria monocytogenes EGD-e] MKIRWIRLSLVAILIIAVVFIGVIGFQKYQFSKSRNKVIMQMDRLMKDQDGGNFRRLDKKENGVEIISYIPKTTEKKDNEIIQKEIGKATDAEVKKLNRDKETQGIIFYTYQKHRMAEQAISYKAVQSEYVKEGRTKFVLKDKKDICKNIVTDAETGALLTLGEVLIKSNQTKLNLKTAVEEELIKTGDFSLKDVGNLGKIKSLVKWNQTDFEITNSEIILPVKIPGAPEPKKVKVKLADIASSVNKRYLPSSVKVPEVPKAKTNKRIALTFDDGPSSSVTPGVLDTLKRHNVKATFFVLGSSVIQNPGLVKRELEEGHQVGSHSWDHPQLTKQSTQEVYNQILKTQKAVFDQTGYFPTTMRPPYGAVNKQVAEEIGLPIIQWSVDTEDWKYRNAGIVTKKVLAGATDGAIVLMHDIHKTTAASLDTTLTKLKSQGYEFVTIDELYGEKLQIGKQYFDKTDSRMVK
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Molecule Role |
Virulence factor |
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Molecule Role Annotation |
MUTATION: lmo0415 (pgdA) is attenuated in mice (Boneca et al., 2007). |
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COG
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COG0726G, under G: Carbohydrate transport and metabolism |
| References |
Boneca et al., 2007: Boneca IG, Dussurget O, Cabanes D, Nahori MA, Sousa S, Lecuit M, Psylinakis E, Bouriotis V, Hugot JP, Giovannini M, Coyle A, Bertin J, Namane A, Rousselle JC, Cayet N, Prévost MC, Balloy V, Chignard M, Philpott DJ, Cossart P, Girardin SE. A critical role for peptidoglycan N-deacetylation in Listeria evasion from the host innate immune system. Proceedings of the National Academy of Sciences of the United States of America. 2007; 104(3); 997-991002. [PubMed: 17215377].
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