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nmpC

Victor ID 4929
Gene Name nmpC
Sequence Strain (Species/Organism) Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
NCBI Gene ID 1253090
NCBI Protein GI 16764916
Locus Tag STM1572
Genbank Accession AE006468
Protein Accession NP_460531
Taxonomy ID 700720
Gene Starting Position 1655172
Gene Ending Position 1656260
Gene Strand (Orientation) +
Protein Name outer membrane porin precursor
Protein pI 4.44
Protein Weight 37496.04
Protein Length 362
Protein Note outer membrane porin protein PmpD (SW:OMPD_SALTY)
DNA Sequence 
>gi|16763390:1655172-1656260 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome
AATGAAACTTAAGTTAGTGGCAGTGGCAGTGACTTCCCTGTTGGCAGCAGGCGTTGTAAATGCAGCCGAG
GTATATAACAAAGACGGCAATAAACTGGATCTGTACGGTAAAGTTCACGCTCAGCATTATTTCTCTGATG
ATAACGGAAGTGATGGTGACAAAACTTACGCGCGTCTGGGCTTTAAAGGCGAAACGCAGATCAACGATCA
GTTAACCGGTTTTGGCCAGTGGGAATATGAATTCAAAGGCAACCGTACTGAAAGCCAGGGCGCTGACAAA
GACAAAACCCGTCTGGCGTTTGCTGGTCTGAAATTCGCTGACTACGGTTCTTTCGACTACGGTCGTAACT
ACGGCGTTGCTTACGACATCGGCGCATGGACCGACGTTCTGCCAGAGTTTGGTGGCGATACCTGGACTCA
GACTGACGTCTTCATGACTGGCCGTACTACTGGTGTTGCCACCTACCGTAACACTGACTTCTTTGGCCTG
GTTGAAGGTCTGAACTTTGCCGCGCAGTACCAGGGCAAAAACGACCGTGACGGCGCGTACGAGTCTAACG
GCGACGGTTTCGGTCTGTCCGCAACGTATGAGTACGAAGGTTTTGGCGTAGGTGCGGCCTATGCGAAGTC
TGACCGTACTAACAACCAGGTGAAAGCAGCGAGCAACCTGAATGCTGCGGGTAAAAACGCTGAAGTCTGG
GCTGCTGGTCTGAAATATGATGCGAACAACATCTACCTGGCGACCACCTACTCCGAAACGCTGAACATGA
CCACCTTCGGTGAAGATGCAGCGGGTGATGCGTTTATCGCGAATAAAACCCAGAACTTCGAAGCGGTTGC
TCAGTATCAGTTCGACTTCGGTCTGCGTCCGTCCATCGCTTACCTGAAATCCAAAGGTAAAAACCTGGGT
ACTTACGGCGACCAGGATCTGGTTGAGTACATCGATGTTGGCGCAACCTACTACTTCAACAAAAACATGT
CCACCTTCGTTGATTACAAAATCAACCTGCTGGACGACAGCGACTTCACCAAAGCGGCTAAAGTGTCTAC
CGACAACATCGTTGCTGTTGGTCTGAACTACCAGTTCTA
Protein Sequence 
>gi|16764916|ref|NP_460531.1| outer membrane porin precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MKLKLVAVAVTSLLAAGVVNAAEVYNKDGNKLDLYGKVHAQHYFSDDNGSDGDKTYARLGFKGETQINDQ
LTGFGQWEYEFKGNRTESQGADKDKTRLAFAGLKFADYGSFDYGRNYGVAYDIGAWTDVLPEFGGDTWTQ
TDVFMTGRTTGVATYRNTDFFGLVEGLNFAAQYQGKNDRDGAYESNGDGFGLSATYEYEGFGVGAAYAKS
DRTNNQVKAASNLNAAGKNAEVWAAGLKYDANNIYLATTYSETLNMTTFGEDAAGDAFIANKTQNFEAVA
QYQFDFGLRPSIAYLKSKGKNLGTYGDQDLVEYIDVGATYYFNKNMSTFVDYKINLLDDSDFTKAAKVST
DNIVAVGLNYQF
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: nmpC (ompD) mutant is attenuated in swine (Selke et al., 2007).
COG COG3203M, under M: Cell wall/membrane/envelope biogenesis
References
Selke et al., 2007: Selke M, Meens J, Springer S, Frank R, Gerlach GF. Immunization of pigs to prevent disease in humans: construction and protective efficacy of a Salmonella enterica serovar Typhimurium live negative-marker vaccine. Infection and immunity. 2007; 75(5); 2476-2483. [PubMed: 17296750].