Search: for Help
About
Introduction
Statistics
Your PHIDIAS
Register or Login
Philert
Submission
Curated Data
Victors
BBP (Brucella)
Phinfo
Phinet
HazARD
Data Analysis
Phigen
Pacodom
BLAST
Help & Documents
Documents
FAQs
Links
Acknowledgements
Disclaimer
Contact Us
UMMS Logo

FTL_1392

Victor ID 492
Gene Name FTL_1392
Sequence Strain (Species/Organism) Francisella tularensis
NCBI Gene ID 3952716
NCBI Protein GI 89256685
Locus Tag FTL_1392
Protein Accession YP_514047.1
Taxonomy ID 119857
Gene Starting Position 1321620
Gene Ending Position 1323329
Gene Strand (Orientation) -
Protein Name Cold-shock DEAD-box protein A
DNA Sequence 
>gi|89255449:1321620-1323329 Francisella tularensis subsp. holarctica LVS chromosome, complete genome
CTTACTGAGCAGTAAGATTTAACTTCTTCCCAGCAACCCAAACTTTTTTTAGATGATTTATCACTTTTGG
TGAAAGATTTGCTGGTAAATCAACTAATGTATAATCTTTTTGAATAGAGATATTACAGATATGTTTACTA
TCGATATTACCCTCATTAGCTATAGCACCAACAATATTTCGCGCTTGAACATCATTATCACGACCAACAT
CTAACTTATAAGTAGTTAGATCGATATTTACAGCACGACGTGGCTTTCTATCTGCTTTATCAAAACGTTT
AGTTCTATCACCTTGATCATTTCTACGCTCAAATCTTTCATTTCTTCTACCATCTCTAGAATTTCTATTA
TCACGAGCTGGTTTTTCTTCTTTAGCTTGAATTTCTCTTGGGAAGAAAGTTTTCTTACCTTGAGCTAGTA
ATGTAAGTCCAGCTAAAAGCTCTTCTGAGTCTAACTGTAATTCATAACGAATACTTGTAATAATTTCTTT
ATACTTATCTAAAGACTTATTTTTATCCAATGCTGAGATTATTCTAGCTTTAAAGTGTTCTACCCTGCTT
TGAGCTAAATCTTTAGCACTTGGCATAAATACTTCTTGCATTGGTGAACCTGTAAATCTCTCTAAAGTAC
GTAAAAATCTCATCTCTTTAAGAGGTACTAAAGAAATTGACGTGCCTTCACGCCCTGCTCTACCTGTACG
CCCAATTCTATGTACATATGTATCAGTATCATTAGGCATATCATAGTTAATCACATGACTAATACGTTCA
AGATCTATACCCCTAGCTACTACATCTGTAGCAACGAGGATATCGGATTTAGCACTTCTGAATTGATCAA
CAATATACTCACGCTGTGATTGTTGCATATCGCCATTTATAGCTGCTACTTTATAGCCAAGAGCTTTTAA
ATTATCTGCTACTTCTATAGTACTTGTCTTAGTCTTAACAAAGATAATAACACCGTCAGTTTCTTCGGTC
TCAAGCAACCTATCTAAAGCATCTATCTTTCTAAAGCCTTTAATGACGATAAATTTTTGTGTCACTGTAT
TAGCAGTTTTTGTTTTCGCTTTCACTTGTATCTTACAAGGATTTCTTAGATATTCTTCGATAATATCAGC
AATATCAGTAGGAATTGTTGCTGAGAAAAGTAATCTTTGGCATTGTTCAGAAACATGACTTAAGACAAAT
TGAACATCATCAATAAAGCCCATTCTGAGCATCTCATCTGCTTCATCTAATACTAATGCTCTAAGATTAT
CAAGCTGTAATGTACCTTTCTCAATATGATCCATTACTCGACCAGTTGTACCAACTACAACTTTTACACC
TTGCTTAAGTGCTCTTATTTGAGAACCATATTCTTGACCACCATAAATACAAGCAACATCTAAATTAGGT
ACATTTTTAGCAAAAGCTTCAAACTGCTCCGCCACTTGTATAGCTAACTCTCTTGTAGGTGCTAGTACCA
AAACTTGTGGAGCTCTATCTCTAGATGCCAAGTCCATGTTATTTATTAGAGGTAATGCAAAAGCTGCTGT
TTTGCCCGTACCCGTTTGTGCTTGACCTAGCACATCTCTACCTGATAAGATATATGGAATAGCATACTGT
TGGATAGGTGTTGGATTTTCATATCCTAGTTTAATAACAGTATCTACAATATCTTGATTCAGCCCAAGCT
GACTAAAATCTTTTTTAGTTTCAGAATTCA
Protein Sequence 
>gi|89256685|ref|YP_514047.1| cold-shock DEAD-box protein A [Francisella tularensis subsp. holarctica LVS] MNSETKKDFSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINNMDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGSQIRALKQGVKVVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEMLRMGFIDDVQFVLSHVSEQCQRLLFSATIPTDIADIIEEYLRNPCKIQVKAKTKTANTVTQKFIVIKGFRKIDALDRLLETEETDGVIIFVKTKTSTIEVADNLKALGYKVAAINGDMQQSQREYIVDQFRSAKSDILVATDVVARGIDLERISHVINYDMPNDTDTYVHRIGRTGRAGREGTSISLVPLKEMRFLRTLERFTGSPMQEVFMPSAKDLAQSRVEHFKARIISALDKNKSLDKYKEIITSIRYELQLDSEELLAGLTLLAQGKKTFFPREIQAKEEKPARDNRNSRDGRRNERFERRNDQGDRTKRFDKADRKPRRAVNIDLTTYKLDVGRDNDVQARNIVGAIANEGNIDSKHICNISIQKDYTLVDLPANLSPKVINHLKKVWVAGKKLNLTAQ
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: a FTL_1392 mutant was attenuated for infection in a mouse lung (Su et al., 2007)
COG COG0513LKJ, under L: Replication, recombination and repair; K: Transcription; J: Translation, ribosomal structure and biogenesis
References
Su et al., 2007: Su J, Yang J, Zhao D, Kawula TH, Banas JA, Zhang JR. Genome-wide identification of Francisella tularensis virulence determinants. Infection and immunity. 2007; 75(6); 3089-3101. [PubMed: 17420240].