Search: for Help
About
Introduction
Statistics
Your PHIDIAS
Register or Login
Philert
Submission
Curated Data
Victors
BBP (Brucella)
Phinfo
Phinet
HazARD
Data Analysis
Phigen
Pacodom
BLAST
Help & Documents
Documents
FAQs
Links
Acknowledgements
Disclaimer
Contact Us
UMMS Logo

rpoE from Actinobacillus pleuropneumoniae L20

Victor ID 4085
Gene Name rpoE from Actinobacillus pleuropneumoniae L20
Sequence Strain (Species/Organism) Actinobacillus pleuropneumoniae L20
NCBI Gene ID 4850464
NCBI Protein GI 126207878
Locus Tag APL_0394
Protein Accession YP_001053103.1
Other Database IDs UniProtKB-ID: A3MZB2_ACTP2
UniRef100: UniRef100_A3MZB2
UniRef90: UniRef90_B0BTP9
UniRef50: UniRef50_A3NXM4
UniParc: UPI0000F283B3
EMBL: CP000569
EMBL-CDS: ABN73498.1
RefSeq_NT: NC_009053.1
GenomeReviews: CP000569_GR
KEGG: apl:APL_0394
eggNOG: COG1595
HOGENOM: HBG753452
OMA: MSLISRY
ProtClustDB: PRK09652
BioCyc: APLE416269:APL_0394-MONOMER
Taxonomy ID 416269
Gene Starting Position 449085
Gene Ending Position 449663
Gene Strand (Orientation) +
Protein Name RNA polymerase sigma factor RpoE
DNA Sequence 
>gi|126207488:449085-449663 Actinobacillus pleuropneumoniae L20, complete genome
GATGAGTGAGCTGGTAGCCGATCAAGAATTGGTTGAACGTGCACAGAAAGGTGATAAAAAAGCATTTAAT
TTACTCGTCGTACGTTATCAGAATAGAGTGGCAGGTTTATTAACTCGCTATGTTTCACGTGATGATATTC
CGGATATTGTGCAGGAATCTTTTATTAAAGCGTATCGTTCATTAGAGTCTTTCCGTGGAGAGAGCGCCTT
TTATACGTGGCTTTATCGTATTGCGGTGAACACTGCTAAAAATCATTTAACCGCTTTGGGAAGACGTCCT
CCTAAAGAAGATATTTTGGCGGAAGATGCGGAGAGCTTTGATGTTGGGGGTCAACTTCGTGAGAGTGATA
CACCGGAAAATGTGGTGCTATCCGAAGAATTAAAACGTGTCGTTTTTGACACGATTGAAAATTTACCTGA
AGAACTCAAAACGGCAATTACTTTGAGTGAGTTGGAAGGTTTAAGTTATGAAGAAATTGCGGAAGTCATG
CAATGTCCCGTCGGTACGGTTCGTTCGCGTATCTTTAGAGCAAGAGAAGCGATTGATGCAAAGGTCAATC
CGCTAATGCAACAGATTTA
Protein Sequence 
>gi|126207878|ref|YP_001053103.1| RNA polymerase sigma factor RpoE [Actinobacillus pleuropneumoniae serovar 5b str. L20] MSELVADQELVERAQKGDKKAFNLLVVRYQNRVAGLLTRYVSRDDIPDIVQESFIKAYRSLESFRGESAFYTWLYRIAVNTAKNHLTALGRRPPKEDILAEDAESFDVGGQLRESDTPENVVLSEELKRVVFDTIENLPEELKTAITLSELEGLSYEEIAEVMQCPVGTVRSRIFRAREAIDAKVNPLMQQI
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: rpoE mutant is attenuated in pigs (Sheehan et al., 2003).
COG COG1595K, under K: Transcription
References
Sheehan et al., 2003: Sheehan BJ, Bossé JT, Beddek AJ, Rycroft AN, Kroll JS, Langford PR. Identification of Actinobacillus pleuropneumoniae genes important for survival during infection in its natural host. Infection and immunity. 2003; 71(7); 3960-3970. [PubMed: 12819083].