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fliF

Victor ID 394
Gene Name fliF
Sequence Strain (Species/Organism) Helicobacter
NCBI Gene ID 900354
NCBI Protein GI 15644979
Locus Tag HP0351
Protein Accession NP_207149.1
Other Database IDs UniProtKB-ID: O25118_HELPY
UniRef100: UniRef100_O25118
UniRef90: UniRef90_E1PYE2
UniRef50: UniRef50_D1B0D7
UniParc: UPI00000D2FDF
EMBL: AE000511
EMBL-CDS: AAD07419.1
RefSeq_NT: NC_000915.1
DIP: DIP-3719N
MINT: MINT-168989
GenomeReviews: AE000511_GR
KEGG: hpy:HP0351
NMPDR: fig|85962.1.peg.347
TIGR: HP_0351
HOGENOM: HBG661951
OMA: FIFYKKV
ProtClustDB: PRK06007
Taxonomy ID 85962
Gene Starting Position 359037
Gene Ending Position 360740
Gene Strand (Orientation) +
Protein Name flagellar MS-ring protein
DNA Sequence 
>gi|15644634:359037-360740 Helicobacter pylori 26695, complete genome
ATTGGATTTAAAGGTATTATTGCAACGGATTGTTGATTTTTTCATCAAGCTCAATAAAAAGCAAAAAATC
GCCCTGATTGCAGCTGGGGTTTTGATCACGGCTTTGCTTGTGTTTTTATTGCTCTATCCCTTTAAAGAAA
AAGACTACACGCAAGGGGGTTATGGGGTTTTATTTGAAGGTTTAGACTCTAGCGATAACGCTTTAATCTT
ACAGCACCTCCAGCAAAACCAAATCCCTTATAAAGTCTCAAAGGACGACACCATCCTTATCCCTAAAGAT
AAAGTGTATGAAGAAAGGATCACTCTGGCTTCTCAAGGGATCCCTAAAACGAGTAAAGTGGGCTTTGAAA
TCTTTGACACTAAAGACTTTGGAGCGACTGATTTTGATCAAAATATCAAACTCATTCGCGCCATTGAGGG
GGAATTGTCGCGCACGATTGAAAGTTTAAACCCCATTTTGAAAGCCAATGTGCATATTGCAATCCCTAAA
GACAGCGTGTTTGTGGCTAAAGAAGTCCCTCCTAGCGCTTCGGTGATGCTCAAACTCAAGCCTGACATGA
AGCTTTCACCCACTCAAATTTTAGGGATTAAAAATTTAATCGCTGCAGCTGTGCCTAAACTCACGATAGA
AAATGTGAAAATCGTGAATGAAAATGGCGAATCAATAGGCGAAGGCGATATACTAGAAAACTCCAAAGAA
TTAGCCCTAGAGCAATTGCATTACAAACAAAATTTTGAAAACATTCTAGAAAATAAGATTGTCAATATCT
TAGCCCCTATTGTGGGGGGTAAAAACAAGGTGGTTGCAAGGGTCAATGCAGAGTTTGATTTCAGCCAAAA
GAAAAGCACTAAAGAGACTTTTGATCCCAATAATGTCGTAAGGAGCGAGCAAAATTTAGAAGAAAAAAAA
GAAGGCGCTTCTAAAAAACAAGTCGGTGGCGTGCCTGGGGTTGTGAGCAATATCGGGCCTGTGCAAGGAT
TGAAAGACAATAAAGAGCCAGAAAAATACGAAAAGTCTCAAAACACAACCAATTATGAAGTGGGTAAAAC
CATTAGCGAGATTAAGGGCGAGTTTGGCACTTTAGTGCGTTTGAATGCGGCGGTTGTGGTGGATGGCAAG
TATAAAATCGCGCTTAAAGATGGGGTAAACACTTTAGAATACGAGCCTTTGAGCGATGAATCGCTTCAAA
AAATCAACGCTCTAGTCAAACAAGCCATTGGCTATAATCAAAATAGAGGCGATGATGTGGCGGTGAGCAA
TTTTGAGTTTAACCCTATGGCACCTGTGATTGATAACGCTACTTTGAGCGAAAAAATCATGCACAAAACT
CAAAAAATCTTAGGCTCATTCACGCCCTTAATCAAGTATATTTTAGTGTTTATAGTGCTATTTATTTTCT
ATAAAAAAGTGATTGTGCCTTTCAGCGAACGCATGCTAGAAGTGGTGCCTGATGAAGATAAGGAAGTGAA
ATCCATGTTTGAAGAAATGGATGAAGAAGAAGATGAATTGAACAAACTGGGCGATTTGAGGAAAAAAGTA
GAAGATCAATTAGGGCTTAATGCAAGCTTTAGCGAAGAAGAAGTAAGATACGAAATCATCTTAGAAAAGA
TTAGAGGGACTCTTAAAGAACGCCCTGATGAAATCGCAATGCTCTTTAAACTCCTAATCAAAGATGAAAT
CTCTTCAGACGGCGCGAAAGGTTA
Protein Sequence 
>gi|15644979|ref|NP_207149.1| flagellar MS-ring protein [Helicobacter pylori 26695] MDLKVLLQRIVDFFIKLNKKQKIALIAAGVLITALLVFLLLYPFKEKDYTQGGYGVLFEGLDSSDNALILQHLQQNQIPYKVSKDDTILIPKDKVYEERITLASQGIPKTSKVGFEIFDTKDFGATDFDQNIKLIRAIEGELSRTIESLNPILKANVHIAIPKDSVFVAKEVPPSASVMLKLKPDMKLSPTQILGIKNLIAAAVPKLTIENVKIVNENGESIGEGDILENSKELALEQLHYKQNFENILENKIVNILAPIVGGKNKVVARVNAEFDFSQKKSTKETFDPNNVVRSEQNLEEKKEGASKKQVGGVPGVVSNIGPVQGLKDNKEPEKYEKSQNTTNYEVGKTISEIKGEFGTLVRLNAAVVVDGKYKIALKDGVNTLEYEPLSDESLQKINALVKQAIGYNQNRGDDVAVSNFEFNPMAPVIDNATLSEKIMHKTQKILGSFTPLIKYILVFIVLFIFYKKVIVPFSERMLEVVPDEDKEVKSMFEEMDEEEDELNKLGDLRKKVEDQLGLNASFSEEEVRYEIILEKIRGTLKERPDEIAMLFKLLIKDEISSDGAKG
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: a fliF mutant was attenuated for gastric colonization in a gerbil model (Kavermann et al., 2003)
COG COG1766NU, under N: Cell motility; U: Intracellular trafficking, secretion, and vesicular transport
References
Kavermann et al., 2003: Kavermann H, Burns BP, Angermuller K, Odenbreit S, Fischer W, Melchers K, Haas R. Identification and characterization of Helicobacter pylori genes essential for gastric colonization. The Journal of experimental medicine. 2003; 197(7); 813-822. [PubMed: 12668646].