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iroC from Escherichia coli S88

Victor ID 3564
Gene Name iroC from Escherichia coli S88
Sequence Strain (Species/Organism) Escherichia coli S88
NCBI Gene ID 7119431
NCBI Protein GI 218534591
Locus Tag pECS88_0127
Protein Accession YP_002401121.1
Other Database IDs UniProtKB-ID: B7LIC2_ECO45
UniRef100: UniRef100_Q8GH16
UniRef90: UniRef90_Q8GH16
UniRef50: UniRef50_Q6KD93
UniParc: UPI00018851D1
EMBL: CU928146
EMBL-CDS: CAQ87190.1
RefSeq_NT: NC_011747.1
EnsemblGenome: EBESCG00000136243.
EnsemblGenome_TRS: EBESCT00000138834
EnsemblGenome_PRO: EBESCP00000127524
GenomeReviews: CU928146_GR
OMA: TYYIAGI
ProtClustDB: CLSK894342
Taxonomy ID 585035
Plasmid No pECOS88
Gene Starting Position 104431
Gene Ending Position 108090
Gene Strand (Orientation) -
Protein Name IroC, ATP binding cassette (ABC) transporter homolog
DNA Sequence 
>gi|218534477:104431-108090 Escherichia coli S88 plasmid pECOS88, complete sequence
ACTATCCCGGGGTTTCCTCCTTCATGTTGTGCTGGCGATGGAGAGCAGTACTGCTGACGCTGTCATGCCA
TAAGCGGGTATAGAGGCCGCCCGCAGATAACAGCTGTTCGTGGGTTCCGTATTCCGCAAGTAACCCCTTA
TCAATAACGGCAATCAGATCGCAGCGTTGCGCGGTGGTCAGACGATGTGCAACAATCAGCGCCGAGTGCT
TCCCGGCATGCACGACATCTGTTAACGATGACATCAGTCGTTCTTCGGATGTGCGATCCAGACATGACGT
GGCTTCGTCGAGCAGCAGGATGTGGGCATTCGCCAGTTGCGCGCGGGCCAGCGCAATCAACTGGCGCTGA
CCTGCGGGCAGATCGGCTCCGCCGTTATTCACCGGTGTCCGGAATCCCTGCGGCAGATTGCACACCATCT
CATACAGCCCTGCCCGCTGTGAGGCAATTTCAACGTCTTCATTGGTGGCGGATGGCCGTGAATAACGAAT
GTTTTCTGCAATATCACTACTAAACAGTGCTACATCCTGATCGACAAGCCCAATCTGGCGACGATACTCA
GTGAGCGAGGCATCATCGAGCATTTGCACACCGATTCTGATGTTGCCGTGCGTGGGGAAATACAACCCGG
CAATCAGCTTAATCAGCGTCGACTTACCCGCACCGCTGCGACCGACGACCGCGACAACCATTCCCTCTGG
GATCGTCAGGGTAAGTTTGTTCAGAGCTGGCTCGTGACTGTCGGGATAACTGAACGTGACCTCATCAAGA
TGCAGTGCACCGGTGACAGGGAGGACCGAAGAGGACCCGAGGTTCTCAGTGCCTTCTGTCGCCAGTAGTT
CATCAATATGTTTGCCGCTGGCTGTCGCCTGCTGCCAGGCGTCGACAATCCCTGATAACTGCTGCACTGG
CCCATAGAATTGCCCCAGCAACAGGAAGAAAGCCGCCAGTACCCCGGCAGTCATTTCTCCAGCGGCGACC
TGCGAAGCTCCCACTAACAGAACAGCGGCATAGGAGGCCTCGGTGCAGAATGTCAGGAACGGAAAATAGA
CTGCAAGGTATTTTTGTGCTCGCACACGGGTTGCGCGGAAACGCTCCGATAACGCGCGCAGCCGGGCGCC
CTCCAGTTCCTGCTGACCATGCGATTGCACGACACGCAGGCCAGAGACTTTTTCCTGCAGGGTGCTGTTG
ACTTTGCCTATTTCCAGCCGTGCCTGTGCATAAGCAGGGGTACTGAGGCGGCGATAAATCATGGTTGCCA
GTGCGGCCACTGGCACTGCGCTTAATGCCGTCAGCGCCAGGAACGGGTCGAGCCAGAACATGGTGGCGGC
GATTGCGAACATCGTCACCAGACTGGTGGCCGCACCGGCAAGGCCGTTTTGCAGAAAGCGGGCGAGAGAG
TCCACATCAACGGTCATGCGGGTAAGACGCGAATCGGCATGCTTTTCATGCCAGGGGAGTCCAAGACGCA
GCATATGGCCGAAGCTGCGCAAGCGCACCGAATGCTGAACTGATTCCGCCGCTCTGGCGGCGAAGACCGT
CTGCAGAGAATAACTGCACCAGCCCACAATGACCAGGCACAGGGCGAGCAGGGCACAGAGGCCGATGATC
GACATATCGCCTGCGGCGACACCGGAGTCAATGCCGTGCTGCAACAGTATCAGTACCCCTACGCCTGCCG
CAGAATCGAGTGCGATCAGCAGAGCGGCGATGACGAACATCCACGCCACAGGCTTCAGTAGTGACGTGAC
TTTGCGACCTTTACCGGCCAGCGCCTGCTGTACTGCATTTTCCGGTACGCGGGTCATACGGGCGACAAAA
CCTTTATCCCCCGTATCCGTTACATCGTCTTGTGTCGCTGGTTCAGCCGGCCACAATTCGTTGTGGCTAT
TGTGGGACGTGGCCAGAAAATCGCTGTCGCCGGTCATCAGTGCGCGGAACGCCGGACAGCGCGCTTCAAG
TTCTGCCGGGGTTCCGGTATCCACCATACGGCCCTTATCCAGCACCACAACCCGGCTGGCTAGCTGAAGT
GTTGAACGCCGTCGGGCAATCACCAGCAGCATATGCCCTTCGTCAGCATAGCGACCCAGCGCGGTATTAA
TCTCCGCTTCCGTAACAGCATCAACCGCTGAGGTAGTATCATCCAGGATTAACACGTCCGGTGCAGTAAT
GAGCGCCCGCGCCAGCGCTATTCGCTGCCTCTGCCCGCCGGAAAGATTCGTACCCCGTTCGGTTAACAGG
CTATCGAAGCCTTTCGGCAGGGCGTTAATAAAATCGCTGGCTCCTGCAGCAGCTGCCGCACGGCGAATGT
CGTCCGCCGTTGCCTGAGGGTGGCCATAGGCGATATTTTCCGCCACCGTACCGGCAAACAGAAAAGCATC
TTCAAATACGATGCCTACCCGGCGACGAAGCGCCTCCAGTCTGATATCGCGAAGATTTTGTCGGCCTTCG
CTGGTGTTGAGCCATATCTTTCCGGAGCAGGGATCATAAAAACGCGCCAGTAGCATCAACAGGGTCGATT
TTCCTGAACCCGATGCGCCCACCACCGCCACGGTTTCACCGGCGCGCAGGGAAAAGGAGATATTGCTGAG
GATATGTCTGTCGCCATGGTGGTAGTCAAAGCTCATATTCTCCAGTTCCAGTCCGACAACCTGACTGTTA
ATCGACTCCGTCCCGTCCTCCATCTGTGAACGGGTGTCGATCAGTGCAAACACCCGCTCCACGGACGCCT
GAGTGCGCTGTGCGATAACCAGAAACGATGCCAGTACGCGGGTTGGCCCGGTCAGCATCGCGAGGAAGCT
GGCGAATGCAACGAAGGTACCGAGATCGATCCGCCCGTGCATGACCGACCACCCGCCGTAGCACAGCAGG
ACGATTTGCCCGAGCACCGGTAGCGCCAGCATGGTGGCCCCAGGCATCGCCTGCGAGATAACCGCACCGA
TGCGTACACGCACAATCTGCCGCGACTGCCTATCGAGCCAGTGCGTTTCACGCATCTCTGCCACACAGGA
TTTTACCACTGAGATCTGTGCCAGCACCTCGCGTATATGTTCGGTGAGATTCGCCAGTTGGTCCGAGGCC
AGCCCGGTTTGCGCGAAGACCCTACGACGCGCACGAAGCGCGGTGATCGCCAGGCATACCAGTACGCACA
CGACGATAAGCGTCATGGCAGGGGACATCCACAGCATCACGGCAATGCCGGCAATGTAATAAGTGAACAC
TGCCAGCGGCACCGGGCACATCTGCAGCAGGGTATGCACCTGCTGCAGATCGCTGTTGGTCCGTGAAATC
ACCTGCCCGGTGCGCAGCGCATCCTGGCCTGCGCCGTCAAGTTTCTGAATACTGTCGAATACCCGTCCTC
TGAGGGTATGCTGCACCCAGAGTGAGAGCATCCCGGCATAACCACGGCGCACATAGTTACCGATGAAATC
AAAAAAAGCGATCAACAGTAACCCGCAGGCCAGCCACGGCAGGCGGGCCGGATTGCCCGCCAGTGCGTCA
TTCACAGCCTGTCTTGTCAGCAGTGGCGTCAGCGCAGCCAGCAAAATAGTCGATACTGACGCTACCACCA
CGATGACACTAAGTTTCTTACGTTCCCAGCACACGCGCGCTAGGCGAACTATCCATGACTGAGCCGGTGT
GGGAGTGTGATTCGCAGGCA
Protein Sequence 
>gi|218534591|ref|YP_002401121.1| IroC, ATP binding cassette (ABC) transporter homolog [Escherichia coli S88] MPANHTPTPAQSWIVRLARVCWERKKLSVIVVVASVSTILLAALTPLLTRQAVNDALAGNPARLPWLACGLLLIAFFDFIGNYVRRGYAGMLSLWVQHTLRGRVFDSIQKLDGAGQDALRTGQVISRTNSDLQQVHTLLQMCPVPLAVFTYYIAGIAVMLWMSPAMTLIVVCVLVCLAITALRARRRVFAQTGLASDQLANLTEHIREVLAQISVVKSCVAEMRETHWLDRQSRQIVRVRIGAVISQAMPGATMLALPVLGQIVLLCYGGWSVMHGRIDLGTFVAFASFLAMLTGPTRVLASFLVIAQRTQASVERVFALIDTRSQMEDGTESINSQVVGLELENMSFDYHHGDRHILSNISFSLRAGETVAVVGASGSGKSTLLMLLARFYDPCSGKIWLNTSEGRQNLRDIRLEALRRRVGIVFEDAFLFAGTVAENIAYGHPQATADDIRRAAAAAGASDFINALPKGFDSLLTERGTNLSGGQRQRIALARALITAPDVLILDDTTSAVDAVTEAEINTALGRYADEGHMLLVIARRRSTLQLASRVVVLDKGRMVDTGTPAELEARCPAFRALMTGDSDFLATSHNSHNELWPAEPATQDDVTDTGDKGFVARMTRVPENAVQQALAGKGRKVTSLLKPVAWMFVIAALLIALDSAAGVGVLILLQHGIDSGVAAGDMSIIGLCALLALCLVIVGWCSYSLQTVFAARAAESVQHSVRLRSFGHMLRLGLPWHEKHADSRLTRMTVDVDSLARFLQNGLAGAATSLVTMFAIAATMFWLDPFLALTALSAVPVAALATMIYRRLSTPAYAQARLEIGKVNSTLQEKVSGLRVVQSHGQQELEGARLRALSERFRATRVRAQKYLAVYFPFLTFCTEASYAAVLLVGASQVAAGEMTAGVLAAFFLLLGQFYGPVQQLSGIVDAWQQATASGKHIDELLATEGTENLGSSSVLPVTGALHLDEVTFSYPDSHEPALNKLTLTIPEGMVVAVVGRSGAGKSTLIKLIAGLYFPTHGNIRIGVQMLDDASLTEYRRQIGLVDQDVALFSSDIAENIRYSRPSATNEDVEIASQRAGLYEMVCNLPQGFRTPVNNGGADLPAGQRQLIALARAQLANAHILLLDEATSCLDRTSEERLMSSLTDVVHAGKHSALIVAHRLTTAQRCDLIAVIDKGLLAEYGTHEQLLSAGGLYTRLWHDSVSSTALHRQHNMKEETPG
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: attenuated in chicks (Caza et al., 2008).
COG COG1132V, under V: Defense mechanisms
References
Caza et al., 2008: Caza M, Lépine F, Milot S, Dozois CM. Specific roles of the iroBCDEN genes in virulence of an avian pathogenic Escherichia coli O78 strain and in production of salmochelins. Infection and immunity. 2008; 76(8); 3539-3549. [PubMed: 18541653].