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iroC from Escherichia coli (strain: APEC O103)

Victor ID 3475
Gene Name iroC from Escherichia coli (strain: APEC O103)
Sequence Strain (Species/Organism) Escherichia coli (strain: APEC O103)
NCBI Gene ID 7324523
NCBI Protein GI 221218541
Locus Tag pO103_43
Protein Accession YP_002527499.1
Other Database IDs UniProtKB-ID: Q7WTI7_ECOLX
UniRef100: UniRef100_Q7WTI7
UniRef90: UniRef90_Q8GH16
UniRef50: UniRef50_Q6KD93
UniParc: UPI000019C35C
EMBL: AY205565
EMBL: CP001232
EMBL-CDS: AAP42471.1
EMBL-CDS: ACJ63528.1
RefSeq_NT: NC_011964.1
HSSP: Q03518
ProtClustDB: CLSK894342
Taxonomy ID 562
Plasmid No pAPEC-O103-ColBM
Gene Starting Position 38689
Gene Ending Position 42474
Gene Strand (Orientation) +
Protein Name Salmochelin siderophore ATP-binding cassette IroC
DNA Sequence 
>gi|221218504:38689-42474 Escherichia coli plasmid pAPEC-O103-ColBM, complete sequence
CATGATAATCATATGCCAGCACCCATCCAGGAGTCATGCATCCATAACAATGCGGGACCGGAGCGTGCTG
GCTTTTTTGCGGAACGATCCGGCCAGTGGATCGTATTTTACAGACGGAGGAGGCTTAATGCCTGCGAATC
ACACTCCCACACCGGCTCAGTCATGGATAGTTCGCCTAGCGCGCGTGTGCTGGGAACGTAAGAAACTTAG
TGTCATCGTGGTGGTAGCGTCAGTATCGACTATTTTGCTGGCTGCGCTGACGCCACTGCTGACAAGACAG
GCTGTGAATGACGCACTGGCGGGCAATCCGGCCCGCCTGCCGTGGCTGGCCTGCGGGTTACTGTTGATCG
CTTTTTTTGATTTCATCGGTAACTATGTGCGCCGTGGTTATGCCGGGATGCTCTCACTCTGGGTGCAGCA
TACCCTCAGAGGACGGGTATTCGACAGTATTCAGAAACTTGACGGCGCAGGCCAGGATGCGCTGCGCACC
GGGCAGGTGATTTCACGGACCAACAGCGATCTGCAGCAGGTGCATACCCTGCTGCAGATGTGCCCGGTGC
CGCTGGCAGTGTTCACTTATTACATTGCCGGCATTGCCGTGATGCTGTGGATGTCCCCTGCCATGACGCT
TATCGTCGTGTGCGTACTGGTATGCCTGGCGATCACCGCGCTTCGTGCGCGTCGTAGGGTCTTCGCGCAA
ACCGGGCTGGCCTCGGACCAACTGGCGAATCTCACCGAACATATACGCGAGGTGCTGGCACAGATCTCAG
TGGTAAAATCCTGTGTGGCAGAGATGCGTGAAACGCACTGGCTCGATAGGCAGTCGCGGCAGATTGTGCG
TGTACGCATCGGTGCGGTTATCTCGCAGGCGATGCCTGGGGCCACCATGCTGGCGCTACCGGTGCTCGGG
CAAATCGTCCTGCTGTGCTACGGCGGGTGGTCGGTCATGCACGGGCGGATCGATCTCGGTACCTTCGTTG
CATTCGCCAGCTTCCTCGCGATGCTGACCGGGCCAACCCGCGTACTGGCATCGTTTCTGGTTATCGCACA
GCGCACTCAGGCGTCCGTGGAGCGGGTGTTTGCACTGATCGACACCCGTTCACAGATGGAGGACGGGACG
GAGTCGATTAACAGTCAGGTTGTCGGACTGGAACTGGAGAATATGAGCTTTGACTACCACCATGGCGACA
GACATATCCTCAGCAATATCTCCTTTTCCCTGCGCGCCGGTGAAACCGTGGCGGTGGTGGGCGCATCGGG
TTCAGGAAAATCGACCCTGTTGATGCTGCTGGCGCGTTTTTATGATCCCTGCTCCGGAAAGATATGGCTC
AACACCAGCGAAGGCCGACAAAATCTTCGCGATATCAGACTGGAGGCGCTTCGTCGCCGGGTAGGCATCG
TATTTGAAGATGCTTTTCTGTTTGCCGGTACGGTGGCGGAAAATATCGCCTATGGCCACCCTCAGGCAAC
GGCGGACGACATTCGCCGTGCGGCAGCTGCTGCAGGAGCCAGCGATTTTATCAACGCCCTGCCGAAAGGC
TTCGATAGCCTGTTAACCGAACGGGGTACGAATCTTTCCGGCGGGCAGAGGCAGCGAATAGCGCTGGCGC
GGGCGCTCATTACTGCACCGGACGTGTTAATCCTGGATGATACCACCTCAGCGGTTGATGCTGTTACGGA
AGCGGAGATTAATACCGCGCTGGGTCGCTATGCTGACGAAGGGCATATGCTGCTGGTGATTGCCCGACGG
CGTTCAACACTTCAGCTAGCCAGCCGGGTTGTGGTGCTGGATAAGGGCCGTATGGTGGATACCGGAACCC
CGGCAGAACTTGAAGCGCGCTGTCCGGCGTTCCGCGCACTGATGACCGGCGACAGCGATTTTCTGGCCAC
GTCCCACAATAGCCACAACGAATTGTGGCCGGCTGAACCAGCGACACAAGACGATGTAACGGATACGGGG
GATAAAGGTTTTGTCGCCCGTATGACCCGCGTACCGGAAAATGCAGTACAGCAGGCGCTGGCCGGTAAAG
GTCGCAAAGTCACGTCACTACTGAAGCCTGTGGCGTGGATGTTCGTCATCGCCGCTCTGCTGATCGCACT
CGATTCTGCGGCAGGCGTAGGGGTACTGATACTGTTGCAGCACGGCATTGACTCCGGTGTCGCCACAGGC
GATATGTCGATCATCGGCCTCTGTGCCCTGCTCGCCCTGTGCCTAGTCATTGTGGGCTGGTGCAGTTATT
CTCTGCAGACGGTCTTCGCCGCCAGAGCGGCGGAATCAGTTCAGCATTCGGTGCGCTTGCGCAGCTTCGG
CCATATGCTGCGTCTTGGACTCCCCTGGCATGAAAAGCATGCCGATTCGCGTCTTACCCGCATGACCGTT
GATGTGGACTCTCTCGCCCGCTTTCTGCAAAACGGCCTTGCCGGTGCGGCCACCAGTCTGGTGACGATGT
TCGCAATCGCCGCCACCATGTTCTGGCTCGACCCGTTCCTGGCGCTGACGGCATTAAGCGCAGTGCCAGT
GGCCGCACTGGCAACCATGATTTATCGCCGCCTCAGTACCCCTGCTTATGCACAGGCACGGCTGGAAATA
GGCAAAGTCAACAGCACCCTGCAGGAAAAAGTCTCTGGCCTGCGTGTCGTGCAATCGCATGGTCAGCAGG
AACTGGAGGGCGCCCGGCTGCGCGCGTTATCGGAGCGTTTCCGCGCAACCCGTGTGCGAGCACAAAAATA
CCTTGCAGTCTATTTTCCGTTCCTGACATTCTGCACCGAGGCCTCCTATGCCGCTGTTCTGTTAGTGGGA
GCTTCGCAGGTCGCCGCTGGAGAAATGACTGCCGGGGTACTGGCGGCTTTCTTCCTGTTGCTGGGGCAAT
TCTATGGGCCAGTGCAGCAGTTATCAGGGATTGTCGACGCCTGGCAGCAGGCGACAGCCAGCGGCAAACA
TATTGATGAACTACTGGCGACAGAAGGCACTGAGCACCTCGGGTCCTCTTCGGTCCTCCCTGTCACCGGT
GCACTGCATCTTGATGAGGTCACGTTCAGTTATCCCGACAGTCACGAGCCAGCTCTGAACAAACTTACCC
TGACGATCCCAGAGGGAATGGTTGTCGCGGTCGTCGGTCGCAGCGGTGCGGGTAAGTCGACGCTGATTAA
GCTGATTGCCGGGTTGTATTTCCCCACGCACGGCAACATCAGAATCGGTGTGCAAATGCTCGATGATGCC
TCGCTCACTGAGTATCGTCGCCAGATTGGGCTTGTCGATCAGGATGTAGCACTGTTTAGTAGTGATATTG
CAGAAAACATTCGTTATTCACGGCCATCCGCCACCAATGAAGACGTTGAAATTGCCTCACAGCGGGCAGG
GCTGTATGAGATGGTGTGCAATCTGCCGCAGGGATTCCGGACACCGGTGAATAACGGCGGAGCCGATCTG
CCCGCAGGTCAGCGCCAGTTGATTGCGCTGGCCCGCGCGCAACTGGCGAATGCCCACATCCTGCTGCTCG
ACGAAGCCACGTCATGTCTGGATCGCACATCCGAAGAACGACTGATGTCATCGTTAACAGATGTCGTGCA
TGCCGGGAAGCACTCGGCGCTGATTGTTGCACATCGTCTGACCACCGCGCAACGCTGCGATCTGATTGCC
GTTATTGATAAGGGGTTACTTGCGGAATACGGAACCCACGAACAGCTGTTATCTGCGGGCGGCCTCTATA
CCCGCTTATGGCATGACAGCGTCAGCAGTACTGCGCTCCATCGCCAGCACAACATGAAGGAGGAAACCCC
GGGATA
Protein Sequence 
>gi|221218541|ref|YP_002527499.1| Salmochelin siderophore ATP-binding cassette IroC [Escherichia coli] MIIICQHPSRSHASITMRDRSVLAFLRNDPASGSYFTDGGGLMPANHTPTPAQSWIVRLARVCWERKKLSVIVVVASVSTILLAALTPLLTRQAVNDALAGNPARLPWLACGLLLIAFFDFIGNYVRRGYAGMLSLWVQHTLRGRVFDSIQKLDGAGQDALRTGQVISRTNSDLQQVHTLLQMCPVPLAVFTYYIAGIAVMLWMSPAMTLIVVCVLVCLAITALRARRRVFAQTGLASDQLANLTEHIREVLAQISVVKSCVAEMRETHWLDRQSRQIVRVRIGAVISQAMPGATMLALPVLGQIVLLCYGGWSVMHGRIDLGTFVAFASFLAMLTGPTRVLASFLVIAQRTQASVERVFALIDTRSQMEDGTESINSQVVGLELENMSFDYHHGDRHILSNISFSLRAGETVAVVGASGSGKSTLLMLLARFYDPCSGKIWLNTSEGRQNLRDIRLEALRRRVGIVFEDAFLFAGTVAENIAYGHPQATADDIRRAAAAAGASDFINALPKGFDSLLTERGTNLSGGQRQRIALARALITAPDVLILDDTTSAVDAVTEAEINTALGRYADEGHMLLVIARRRSTLQLASRVVVLDKGRMVDTGTPAELEARCPAFRALMTGDSDFLATSHNSHNELWPAEPATQDDVTDTGDKGFVARMTRVPENAVQQALAGKGRKVTSLLKPVAWMFVIAALLIALDSAAGVGVLILLQHGIDSGVATGDMSIIGLCALLALCLVIVGWCSYSLQTVFAARAAESVQHSVRLRSFGHMLRLGLPWHEKHADSRLTRMTVDVDSLARFLQNGLAGAATSLVTMFAIAATMFWLDPFLALTALSAVPVAALATMIYRRLSTPAYAQARLEIGKVNSTLQEKVSGLRVVQSHGQQELEGARLRALSERFRATRVRAQKYLAVYFPFLTFCTEASYAAVLLVGASQVAAGEMTAGVLAAFFLLLGQFYGPVQQLSGIVDAWQQATASGKHIDELLATEGTEHLGSSSVLPVTGALHLDEVTFSYPDSHEPALNKLTLTIPEGMVVAVVGRSGAGKSTLIKLIAGLYFPTHGNIRIGVQMLDDASLTEYRRQIGLVDQDVALFSSDIAENIRYSRPSATNEDVEIASQRAGLYEMVCNLPQGFRTPVNNGGADLPAGQRQLIALARAQLANAHILLLDEATSCLDRTSEERLMSSLTDVVHAGKHSALIVAHRLTTAQRCDLIAVIDKGLLAEYGTHEQLLSAGGLYTRLWHDSVSSTALHRQHNMKEETPG
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: attenuated in chicks (Caza et al., 2008).
References
Caza et al., 2008: Caza M, Lépine F, Milot S, Dozois CM. Specific roles of the iroBCDEN genes in virulence of an avian pathogenic Escherichia coli O78 strain and in production of salmochelins. Infection and immunity. 2008; 76(8); 3539-3549. [PubMed: 18541653].