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hfq

Victor ID 3411
Gene Name hfq
Sequence Strain (Species/Organism) Salmonella enterica subsp. enterica serovar Enteritidis str. P125109
NCBI Gene ID 6949622
NCBI Protein GI 207859507
Locus Tag SEN4128
Protein Accession YP_002246158.1
Other Database IDs UniProtKB-ID: HFQ_SALEP
UniRef100: UniRef100_B5F387
UniRef90: UniRef90_B7NGA6
UniRef50: UniRef50_A4W5R3
UniParc: UPI000005A92C
EMBL: AM933172
EMBL-CDS: CAR35688.1
RefSeq_NT: NC_011294.1
GenomeReviews: AM933172_GR
KEGG: set:SEN4128
HOGENOM: HBG645207
OMA: KNTVTQM
ProtClustDB: PRK00395
Taxonomy ID 550537
Gene Starting Position 4459867
Gene Ending Position 4460175
Gene Strand (Orientation) +
Protein Name RNA-binding protein Hfq
DNA Sequence 
>gi|207855516:4459867-4460175 Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 chromosome, complete genome
AATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCATTGCGTCGGGAACGTGTTCCAGTTTCT
ATTTATTTGGTGAATGGTATTAAGCTGCAAGGTCAAATCGAGTCCTTTGATCAGTTCGTGATCCTGTTGA
AGAACACGGTCAGCCAGATGGTTTATAAGCACGCGATTTCTACTGTTGTCCCGTCTCGCCCGGTTTCTCA
TCACAGCAACAATGCCGGTGGCGGCGCCAGCAATAACTACCATCACGGTAGCAACGCGCAGGGTTCTACT
GCGCAACAGGACAGCGAAGAGACTGAATA
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: hfq mutant is attenuated in mice (Karasova et al., 2009).
COG COG1923R, under R: General function prediction only
References
Karasova et al., 2009: Karasova D, Sebkova A, Vrbas V, Havlickova H, Sisak F, Rychlik I. Comparative analysis of Salmonella enterica serovar Enteritidis mutants with a vaccine potential. Vaccine. 2009; 27(38); 5265-5270. [PubMed: 19577637].