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babA

Victor ID 3394
Gene Name babA
Sequence Strain (Species/Organism) Helicobacter
NCBI Gene ID 6963184
NCBI Protein GI 208434264
Locus Tag HPG27_298
Protein Accession YP_002265930.1
Other Database IDs UniProtKB-ID: B5ZA84_HELPG
UniRef100: UniRef100_B5ZA84
UniRef90: UniRef90_B5ZA84
UniRef50: UniRef50_B6JMB5
UniParc: UPI000181C1D0
EMBL: CP001173
EMBL-CDS: ACI27064.1
RefSeq_NT: NC_011333.1
GenomeReviews: CP001173_GR
KEGG: hpg:HPG27_298
HOGENOM: HBG501479
OMA: FASGCAY
ProtClustDB: CLSK2392999
Taxonomy ID 563041
Gene Starting Position 329098
Gene Ending Position 331332
Gene Strand (Orientation) -
Protein Name outer membrane protein
DNA Sequence 
>gi|208433976:329098-331332 Helicobacter pylori G27, complete genome
TTTAGTAAGCGAACACATAATTCAAATACACGCTATAAAGCCTGCGGTATTTGAGTTCAGCCCCCATGAA
GGAATAGTAATTGGTGTTAATGGTAGGGATTTTAAGCCCTAACTCAATCCCATGCTGAGCCGCATGATCG
CTGCCTTTTTTCTTGGATCTGGCTAAATTCATCCTCACCCCCATGTTGAATAAGAATTGGAAATTCGCCA
CATTCATTTTAGCGTTATAGACGTTATTCATGGTGGCTAAATTCACGTACTCAGAATTGAGCCATGAAGT
GCCCGCTAACGCAATCCCGCCAAAAAGCCCCACAGAAAGCTTGTTGTTTTTGCCTAAGAAATTGGTGGCT
TTATCGTTGATGAAGTTATAAAGAGCGTCCGCTCCAAAACCATAAGTCCATACATCAGAAGCCGAGTTGA
AGAAGTTGGATTTGATGAACGCATGGTTGTAATCAAAAAAGCCGTAATACCTAGCGCCCCATTTTCTTTT
TTGCCCGAAGAATTGCTTGTAACCCACCTGAATACCGATCCCATTCATCGCTCCGTTGTTGGTTTGAGAA
CTAACAATACCCACTTTCCTAAAGGGGTTACGCCCGAGTTCTTGGTTGATGGTTTGGATTTGGTTGTAAG
TGTTTTGATTCAAGTAGTAGTTGGTCTCTATGCCTTGTGGGCTATAGGGGTTATTCTTTTTACTCACCAC
ATTTTGCAAGCTTTGCGCGTTAGGGATGCTTGAAAGCGCAGTGGTGATGCTGTTATAAGTGTTGCCCAAT
TCGCTGTATCTAGATTTGAAATTCACCAAAGTGTCAGCGATATTCTCCGCTTGCTGTATTTGCTGCTCTT
GAGTGCCAAAATGCGCGATACTGTTTTCTAAATTCGTTATGGTTTGTTCCACATAGGCGCAACCAGAAGC
GAAAGTTTGAGTGGTCACTGTGCCAGGAGCTGAACCTTGGTTGTAATGATTACCATTTGTTGATTTGTTA
TCGCATGTGGCTAAAAAGCCTGTAACAAAATTTTTAAAAGTCCCGGTAAGATTGTCAGGGTTAATGGTTT
GCCCCACCTGATGGGCTAAATTGAGCATTTTAACTTGCGCGCTAGCGTTAGCGAGCATGCCTTGCGCAAA
GCTTGCGTCTGTGTAGGGGTTGAAAGGCTTGCCATTATTATTGCCTACCGGGGTTGATTGTTCATGCTCG
TTAATGACGCTCGTTTGATTAACTAGCTCTTGCGCGTCCGTGATCATCTTTTGAATCGCGCTGATTTCTT
CTGAAAACGCGCCGCATATTTTCCCAGTAGTAGTAGAGAATTTTGGGGCATTAGCCTCACTACTATTACT
AGCGTGGAAATACGGGCATGCTTCGTTGATGGTGTTAATAAGCGTGCTGGCTTGCACTAAGAGCGCTTGA
GCGCTATCAGGCACACCATCTAATTTGTTGGTGATTTCGGTGTAGCTCACACCTCTTGTATTACCTGACG
CACTAGAATCAACGACTTTTGAACTGATCGTGGTGGTTACGCTTTTGCCGTCTATGATTTGGGTTTCAGT
CTTGGTTCCGCTGTTTTGATTATCTACACCTGTGGCTTCTTTCGAGCAGTTATCATTCCCGTTCCCTGAG
CATGTGTAGGTGTAGGTTACACTCACCGTCCCGTTGTTTTCTTTGAGTGCGGGTAAGCCTTGTTTTAAAG
CCGTTTGGAGGATCTGGTAGGCTTTGTTAAGCTTTTTGAAATTCTCAATACTCATAGGGCCGTAGTATCC
AGGATTATACCCGTTAAGAGAACAAGTGATAGAAGTGGATCGATACCCTGGCTCGTTGTTGAAGATGGTT
GTTGAAGAGGTGCTTTTTTGACCATTGGCATTACCGCCGCATTGCGTGATATAGCCCACGACATTCCAAA
ACCCCACCGCCGCGTTGATCGCTAAAAGCACGGCTTGATAGGCGGGGGAGTTGGCTTTATCGCCGATCAA
ATTCTTCGCGCTCATGCCCAGATTTTCACGCGCCGCATTAACCGCGCTCGGGTCAGCGGACAATTTGATC
AGGGTGTTTAGGGTGCTGTATCGGGTTAAAAGGTTGTTCAAACTTTCATAACGATCTGAAAGCTCTTGAA
TGCCTTTGGTGTTTGTTACCATTTGAGCGGCTTCACCGATTTGATAGCCTACGCTTGTGTAAAAGCCGTC
GTCTTCAGCGCTCAATGCGGAAACTAAAAGCGAGCCTAAAGTTAATGAAAGGATGTGTTTTTTCA
Protein Sequence 
>gi|208434264|ref|YP_002265930.1| outer membrane protein [Helicobacter pylori G27] MKKHILSLTLGSLLVSALSAEDDGFYTSVGYQIGEAAQMVTNTKGIQELSDRYESLNNLLTRYSTLNTLIKLSADPSAVNAARENLGMSAKNLIGDKANSPAYQAVLLAINAAVGFWNVVGYITQCGGNANGQKSTSSTTIFNNEPGYRSTSITCSLNGYNPGYYGPMSIENFKKLNKAYQILQTALKQGLPALKENNGTVSVTYTYTCSGNGNDNCSKEATGVDNQNSGTKTETQIIDGKSVTTTISSKVVDSSASGNTRGVSYTEITNKLDGVPDSAQALLVQASTLINTINEACPYFHASNSSEANAPKFSTTTGKICGAFSEEISAIQKMITDAQELVNQTSVINEHEQSTPVGNNNGKPFNPYTDASFAQGMLANASAQVKMLNLAHQVGQTINPDNLTGTFKNFVTGFLATCDNKSTNGNHYNQGSAPGTVTTQTFASGCAYVEQTITNLENSIAHFGTQEQQIQQAENIADTLVNFKSRYSELGNTYNSITTALSSIPNAQSLQNVVSKKNNPYSPQGIETNYYLNQNTYNQIQTINQELGRNPFRKVGIVSSQTNNGAMNGIGIQVGYKQFFGQKRKWGARYYGFFDYNHAFIKSNFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKLSVGLFGGIALAGTSWLNSEYVNLATMNNVYNAKMNVANFQFLFNMGVRMNLARSKKKGSDHAAQHGIELGLKIPTINTNYYSFMGAELKYRRLYSVYLNYVFAY
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: strains lacking BabA cannot adhere to Leb, expressed on gastric epithelium (Solnick et al., 2004).
References
Solnick et al., 2004: Solnick JV, Hansen LM, Salama NR, Boonjakuakul JK, Syvanen M. Modification of Helicobacter pylori outer membrane protein expression during experimental infection of rhesus macaques. Proceedings of the National Academy of Sciences of the United States of America. 2004; 101(7); 2106-2111. [PubMed: 14762173].