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babA

Victor ID 3380
Gene Name babA
Sequence Strain (Species/Organism) Helicobacter
NCBI Gene ID 7010027
NCBI Protein GI 210135084
Locus Tag HPP12_0891
Protein Accession YP_002301523.1
Other Database IDs UniProtKB-ID: B6JMB5_HELP2
UniRef100: UniRef100_B6JMB5
UniRef90: UniRef90_B5ZA84
UniRef50: UniRef50_B6JMB5
UniParc: UPI0001833693
EMBL: CP001217
EMBL-CDS: ACJ08043.1
RefSeq_NT: NC_011498.1
GenomeReviews: CP001217_GR
KEGG: hpp:HPP12_0891
HOGENOM: HBG501479
ProtClustDB: CLSK2392999
Taxonomy ID 570508
Gene Starting Position 944494
Gene Ending Position 946728
Gene Strand (Orientation) -
Protein Name outer membrane protein BabA
DNA Sequence 
>gi|210134201:944494-946728 Helicobacter pylori P12 chromosome, complete genome
TTTAGTAAGCGAACACATAATTCAAATACACGCTATAAAGCCTTCTGTATTTGAGTTCAGCCCCCATAAA
GGAATAGTAATTGGTGTTGATGGTGGGGATTTTAAGCCCTAACTCAATCCCATGCTGAGCCACATGATCG
CTGCCTTTTTTCTTGGATCTGGCTAAATTCATCCTCACTCCCATGTTGAATAAGAATTGGAAATTCGCCA
CATTCATTTTAGCGTTATAGACATTATTCACGGTGGCTAAATTCACGTATTCAGAATTAAGCCATGAAGT
GCCCGCTAACGCAATCCCGCCAAAAAGCCCTACAGAAAGCTTGTTGTTCTTGCCTAAGAAATTGGTGGCT
TTATCGTTGATGAAGTTATAAAGAGCGTCCGCTCCAAAACCATAAGTCCACACATCAGAAGCCGAGTTGA
AAAAGCTGGATTTAATGAACGCATGGTTGTAGTCAAAAAAGCCGTAATACCTAGCGCCCCATTTCCTTTT
TTGGCCAAAGAATTGTTTGTAGCCCACCTGAATACCGATCCCATTCATGGCACCATTGTTGGTTTGAGAG
CTGACGATGCCCACTTTCCTAAAAGGGTTACGCCCGAGTTCTTGGTTGATGGTTTGGATTTGGTTGTAAG
AATTTTGATTCAAGTAGTAATTGGTTTCTATGCCTTGCGGGCTATAGGGGTTATTCTTTTTACTCACCAC
ATTTTGCAAGCTTTGCGCGTTAGGGACTTTGGAGAGCGCGGTAGTGATGCTGTTATAAGTGTTGCCCAAT
TCGCTGTATCTAGATTTGAAATTCACTAGAGTGTCAGCGATGTTTTCGGCTTGCTGTATTTGCTGCTCTT
GAGTGCCAAAATGAGCGATGCTGTTTTCTAAATTCGTTATGGTTTGTTCCACATAGGCACAACCGGAAGC
GAAAGTTTGAGTGGTAACTGTGCCAGGAGGTGAACCTTGTGTGCCGCCAGTGCCAGCTGTTGATTTGTTG
TTGCATGTGGCTAAAAAGTCTGTAACAAAATTTTTAAAAGTCCCAGTAAGATTTTCAGGGTTAAGGGTTT
GCCCCACCTGATGGGCTAAATTGAGCATTTTGGCTTGCGCGCTAGCGTTAGCGAGCATGCCTTGCGCAAA
GCTAGCGTCTGTGAAAGGGTTGAAAGGCTTGCCATTATTATTGCCTACCGGAGTTGATTGTTCATGCTCG
TTAATGACGCTCGTTTGATTGACCAGATCTTGCGCGTCCGTGATCATCTTTTGGATCGCACTGATTTCTT
CTGAAAAAGCACCGCATATTTTCCCAGTAGTAGTAGAGAATTTTGGGGCGTTAGCCTCACTACTATTATT
AGCATGGAAAAACGGGCATGCCGTGTTGATGGTGTTAATGAGCGTGCTCGCTTGCGCTAACAAGAATTGA
GCGTTATCAGGCACTCCTTCTAATTTGTTAGTGATTTCGGTGTAGGAGACATGTGATGTGTTACCTGATG
CTTTGCTATCAACCACTTTTGAACTGATCGTGGTGTTAACCTGTTTGCCGTCTATGGTTTGGGTTTCAGT
TTTGGTTCCGTCGTTTTGTTGGTTTACACCTGTGGTTTGTGGCGAGCAGTTGTCATTCCCTTTCCCTGAG
CATGTGTAGGTATAGGTTACACTGACCGTTCCGTTGTTTTCTTTGAGTGCGGGCAAGCCTTGTTTTAAAG
CCGTTTGGAGGATTTGATAGGCTTCGTTAAGCTTTTTGAAATTCTCAATACTCATAGGGCCATAGTATCC
AGGCGTATACCCGTTAAGAGAACAAGTGATGGAAGTGGAACGATACCCTGGCTCGTTGTTGAAGATGGTG
GTTGAAGAGGTGCTTGTTTGACCATTAGCGTTACCCCCGCATTGCGTCACATAGCCTACGACATTCCAAA
ACCCCACCGCCGCGTTGATCGCTAAAAGCACGGCTTGATAGGCGGGGGAATTTTTGGTATCGCCGATCAA
ATTCTTCGCGCTCGCGCCCAGATTTTCACGTGCCGCATTGACAGCGCTCGGATCAGCGGACAATTTGATA
AGGGTGTTTAGGGTGCTGTAATTATTCAAAAGATTGTTCAGCTTTTCATAATTGTCTGAAAGCTCTTGGA
TGCCTTTGGTGTTTGTTACCATTTGAGCGGCTTCACCGATCTGATAGCCTACGCTTGTGTAAAAGCCGTC
GTCTTCAGCGCTCAATGCGGAAACTAAAAGCGAGCCTAAAGTTAATGAAAGGATGTGTTTTTTCA
Protein Sequence 
>gi|210135084|ref|YP_002301523.1| outer membrane protein BabA [Helicobacter pylori P12] MKKHILSLTLGSLLVSALSAEDDGFYTSVGYQIGEAAQMVTNTKGIQELSDNYEKLNNLLNNYSTLNTLIKLSADPSAVNAARENLGASAKNLIGDTKNSPAYQAVLLAINAAVGFWNVVGYVTQCGGNANGQTSTSSTTIFNNEPGYRSTSITCSLNGYTPGYYGPMSIENFKKLNEAYQILQTALKQGLPALKENNGTVSVTYTYTCSGKGNDNCSPQTTGVNQQNDGTKTETQTIDGKQVNTTISSKVVDSKASGNTSHVSYTEITNKLEGVPDNAQFLLAQASTLINTINTACPFFHANNSSEANAPKFSTTTGKICGAFSEEISAIQKMITDAQDLVNQTSVINEHEQSTPVGNNNGKPFNPFTDASFAQGMLANASAQAKMLNLAHQVGQTLNPENLTGTFKNFVTDFLATCNNKSTAGTGGTQGSPPGTVTTQTFASGCAYVEQTITNLENSIAHFGTQEQQIQQAENIADTLVNFKSRYSELGNTYNSITTALSKVPNAQSLQNVVSKKNNPYSPQGIETNYYLNQNSYNQIQTINQELGRNPFRKVGIVSSQTNNGAMNGIGIQVGYKQFFGQKRKWGARYYGFFDYNHAFIKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKLSVGLFGGIALAGTSWLNSEYVNLATVNNVYNAKMNVANFQFLFNMGVRMNLARSKKKGSDHVAQHGIELGLKIPTINTNYYSFMGAELKYRRLYSVYLNYVFAY
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: strains slacking BabA cannot adhere to Leb, expressed on gastric epithelium (Solnick et al., 2004).
References
Solnick et al., 2004: Solnick JV, Hansen LM, Salama NR, Boonjakuakul JK, Syvanen M. Modification of Helicobacter pylori outer membrane protein expression during experimental infection of rhesus macaques. Proceedings of the National Academy of Sciences of the United States of America. 2004; 101(7); 2106-2111. [PubMed: 14762173].