Search: for Help
About
Introduction
Statistics
Your PHIDIAS
Register or Login
Philert
Submission
Curated Data
Victors
BBP (Brucella)
Phinfo
Phinet
HazARD
Data Analysis
Phigen
Pacodom
BLAST
Help & Documents
Documents
FAQs
Links
Acknowledgements
Disclaimer
Contact Us
UMMS Logo

homB

Victor ID 3378
Gene Name homB
Sequence Strain (Species/Organism) Helicobacter
NCBI Gene ID 7009855
NCBI Protein GI 210134914
Locus Tag HPP12_0721
Protein Accession YP_002301353.1
Other Database IDs UniProtKB-ID: B6JLU5_HELP2
UniRef100: UniRef100_B6JLU5
UniRef90: UniRef90_B6JLU5
UniRef50: UniRef50_B6JLU5
UniParc: UPI00018338F0
EMBL: CP001217
EMBL-CDS: ACJ07873.1
RefSeq_NT: NC_011498.1
GenomeReviews: CP001217_GR
KEGG: hpp:HPP12_0721
HOGENOM: HBG501455
ProtClustDB: CLSK496169
Taxonomy ID 570508
Gene Starting Position 772455
Gene Ending Position 774464
Gene Strand (Orientation) +
Protein Name outer membrane protein HomB
DNA Sequence 
>gi|210134201:772455-774464 Helicobacter pylori P12 chromosome, complete genome
CATGAAAAAACTATTCATCCCACTTTTATTATTCAGCGCTTTAGAAGCGAATGAGAAAAATGGCTTTTTC
ATAGAAGCTGGGTTTGAAACAGGGCTATTAGAAGGTGCACAAACGCAAGAAAAAAGACACACCACCACAA
AAAACACTTACGCAACTTACAATTATTTACCCACAGACACGATTTTAAAAAGAGCGGCTAATTTATTCAC
AGACGCTAAATCTATATCACAATTAAACTTTTCATCTTTATCCCCTGTTAAAGTGCTGTATATGTATAAT
GGTCAATTAACTATAGAAAACTTCTTACCTTATAATTTAAGCAATGTTAAGCTTAGTTTTACAGACACTC
AAGGCAATGTGATCGATCTAGGCGTGATAGAGACTATCCCCAAACACTCTAAAATTGTTTTACCTGGGGA
GGCGTTTAATAGTCTAAAAGAGGCGTTTGATAAAATTGACCCCTATACTTTCTTTTTTCCAAAATTTGAA
GCCACTAGCACTTCTGTTTCTGACGCTAACACGCAAAGGGTGTTTGAAACGCTCAATAAGATTAAAACAA
ATCTCATAATGAAATATAGTAATGAAAATCCAAACAATTTCAACACTTGTCCTTACAATAATAATGGTAA
TACAAAAAATGATTGTTGGCAAAATTTCACCCCACAAACCGCAGAAGAATTCACTAATTTAATGTTGAAC
ATGATCGCTGTCTTAGACTCTCAATCTTGGGGCGATGCGATTTTAAACGCTCCTTTTGAGTTCACTAATA
AAGGCGGAGGAGGGGAATGCGATACCAGCAAAGAGAATGATTGCGTAAATCCCGGGACAAACGGGCTTGT
CAATTCTCAAAATAAAAGTTATGTGTTAAACAAACAAGACATTGTCAATAAGTTTAGAAACAAAGCGGAT
CTTGATGTCGTTATTCTAAAGGATTCAGGGGTTGTAGGGCTTGGGAGTGATATTACCCCTAGCAACAATG
ATGATGGCAAGCATTATGGCCAGTTAGGGGTAGTAGCTTCTGCCTTAGATCCTAAAAAACTCTTTGGCAA
CGACCTTAAGACTATCAATTTGGCTGATTTAAGAACCATTTTGCATGAATTCAGCCACACTAAAGGCTAC
ACCCATAACGGGAACATGACTTATCAAAGGGTGCCAACCGGTCAAAATGAAAATGGCAAGCCAAAAGATT
CTGATGGCCTCCCCTATAACGTGTGTTCGCTTTATGGGGGAGCCAATCAGCCCGCTTTCCCTAGCAACTA
CCCTAATTCCATTTATCACAATTGCGCGGATGTCCCGGCTGGCTTTTTAGGGGTAACAGCAGCGGTCTGG
CAGCAGCTCATCAATCAAAACGCCTTGCCGATCAGCTACGCTAACTTGGGGAGTCAAACAAACTACAATC
TAAACGCTAGTTTGAACACGCAAGATTTAGCCAATTCCATGCTCAGCACCATTCAAAAAACCTTTGTCAC
TTCTAGCGTTACCAACCACTATTCTTCAAGCGCTTCGCAAAGCTTTAGAAGCCCTATTTTAGGGGTTAAC
GCTAAAATAGGCTATCAAAACTACTTTAATGATTTCATAGGATTAGCTTATTATGGCATCATCAAATACA
ATTACGCTAAAGCTATTAATCAAAAAGTCCAGCAATTGAGCTATGGTGGGGGGATAGATTTGTTGTTGGA
TTTCATCACCACTTACTCTAATAAAAATAGCCCTATAGGCATTCAAACCAGAAGAAACTTTTCTTCATCT
TTTGGTATCTTTGGGGGGTTAAGGGGCTTGTATAACAGCTATTATGTGTTAAATAAAGTCAAAGGAAGCG
GTAATTTAGATGTGGCTACCGGATTGAACTACCGCTATAAGCATTCTAAGTATTCTGTAGGGATTAGCAT
TCCTTTAATCCAAAGAAAAGCCAGCGTCGTTTCTAGCGGTGGCGATTACACGAACTCTTTTGTTTTTAAT
GAAGGGGCTAGCCATTTTAAGGTGTTTTTTAATTACGGGTGGGTGTTTTG
Protein Sequence 
>gi|210134914|ref|YP_002301353.1| outer membrane protein HomB [Helicobacter pylori P12] MKKLFIPLLLFSALEANEKNGFFIEAGFETGLLEGAQTQEKRHTTTKNTYATYNYLPTDTILKRAANLFTDAKSISQLNFSSLSPVKVLYMYNGQLTIENFLPYNLSNVKLSFTDTQGNVIDLGVIETIPKHSKIVLPGEAFNSLKEAFDKIDPYTFFFPKFEATSTSVSDANTQRVFETLNKIKTNLIMKYSNENPNNFNTCPYNNNGNTKNDCWQNFTPQTAEEFTNLMLNMIAVLDSQSWGDAILNAPFEFTNKGGGGECDTSKENDCVNPGTNGLVNSQNKSYVLNKQDIVNKFRNKADLDVVILKDSGVVGLGSDITPSNNDDGKHYGQLGVVASALDPKKLFGNDLKTINLADLRTILHEFSHTKGYTHNGNMTYQRVPTGQNENGKPKDSDGLPYNVCSLYGGANQPAFPSNYPNSIYHNCADVPAGFLGVTAAVWQQLINQNALPISYANLGSQTNYNLNASLNTQDLANSMLSTIQKTFVTSSVTNHYSSSASQSFRSPILGVNAKIGYQNYFNDFIGLAYYGIIKYNYAKAINQKVQQLSYGGGIDLLLDFITTYSNKNSPIGIQTRRNFSSSFGIFGGLRGLYNSYYVLNKVKGSGNLDVATGLNYRYKHSKYSVGISIPLIQRKASVVSSGGDYTNSFVFNEGASHFKVFFNYGWVF
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: knockout strains reduced damage and adherence to human gastric epithelial cells (Oleastro et al., 2008).
References
Oleastro et al., 2008: Oleastro M, Cordeiro R, Ferrand J, Nunes B, Lehours P, Carvalho-Oliveira I, Mendes AI, Penque D, Monteiro L, Mégraud F, Ménard A. Evaluation of the clinical significance of homB, a novel candidate marker of Helicobacter pylori strains associated with peptic ulcer disease. The Journal of infectious diseases. 2008; 198(9); 1379-1387. [PubMed: 18811585].