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sigF from Mycobacterium tuberculosis H37Rv

Victor ID 330
Gene Name sigF from Mycobacterium tuberculosis H37Rv
Sequence Strain (Species/Organism) Mycobacterium tuberculosis H37Rv
NCBI Gene ID 888727
NCBI Protein GI 15610422
Locus Tag Rv3286c
Protein Accession NP_217803.1
Other Database IDs UniProtKB-ID: Q7D5S2_MYCTU
UniRef100: UniRef100_A5U7W0
UniRef90: UniRef90_A5U7W0
UniRef50: UniRef50_A8L2N7
UniParc: UPI00000D1082
EMBL: AE000516
EMBL: BX842582
EMBL-CDS: AAK47728.1
EMBL-CDS: CAB07069.1
RefSeq_NT: NC_000962.2
RefSeq_NT: NC_002755.2
EnsemblGenome: EBMYCG00000001723.
EnsemblGenome_TRS: EBMYCT00000001724
EnsemblGenome_PRO: EBMYCP00000001724
EnsemblGenome: EBMYCG00000068991.
EnsemblGenome_TRS: EBMYCT00000068996
EnsemblGenome_PRO: EBMYCP00000067055
GenomeReviews: AE000516_GR
GenomeRev
Taxonomy ID 83332
Gene Starting Position 3668168
Gene Ending Position 3668953
Gene Strand (Orientation) -
Protein Name RNA polymerase sigma factor SigF
DNA Sequence 
>gi|57116681:3668168-3668953 Mycobacterium tuberculosis H37Rv, complete genome
GCTACTCCAACTGATCCCGTAGCCGTGCCAATGACTTGGCCAGCAGCCGCGACACGTGCATCTGTGAGAT
ACCGACGCGCTCGGCGATCTGCGTTTGGGTCATCGAGTCGAAGAACCTGAGCACCAAGACCGTTCGTTCC
CGCTCGGGCAACGCCTCGAGCAACGGACGAAGCACCTCCCGATTCTCGATCTGGTCAAGACCCGCATCCA
CGTCGCCCAGGGTGTCTGTGATTGCGCGGGCATCGTCGTCGCTGCCGCCACCGCTGTCGATGGACAAGGT
GTGGTAGGAACTACCCGCCAGCAAACCTTCGATAACCTCAGCGCGGTCCATCCCGAGCTCCGCGGCGAGC
TCCGATGCCGACGGCGCCCGCCCGAGCCGCTGCGACAAATCGGCGGTGGCGGTACCTAGCCGCAGATGCA
GTTCCTTGAGACGCCGGGGAACCTTGACCGACCAGCTGTTGTCGCGGAAGTGTCGTCGGACCTCGCCCAT
GATGGTAGGAACCGCGAAGGAGACGAAGTCCGACCCGGTCTTCACGTCGAAGCGAACCGCGGCGTTGACC
AGCCCGACCCGCGCGACCTGAATAAGGTCGTCACGCGGTTCGCCGCGACCCTCGAACCGCCGCGCGATGT
GATCGGCCAGCGGCAAGCACCGCTGAACGATCTTGTCCCGGTGCCGCTGGAATTCCGGTGAGCCGGCAGG
CAAACCAACCAGCTCGCGAAACATCTCCGGAACGTCGGCGTATTCGTTAGCTCGCGATGCAGAACCGCCG
GCAGCGCGCGCCGTCA
Protein Sequence 
>gi|15610422|ref|NP_217803.1| RNA polymerase sigma factor SigF [Mycobacterium tuberculosis H37Rv] MTARAAGGSASRANEYADVPEMFRELVGLPAGSPEFQRHRDKIVQRCLPLADHIARRFEGRGEPRDDLIQVARVGLVNAAVRFDVKTGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRRLKELHLRLGTATADLSQRLGRAPSASELAAELGMDRAEVIEGLLAGSSYHTLSIDSGGGSDDDARAITDTLGDVDAGLDQIENREVLRPLLEALPERERTVLVLRFFDSMTQTQIAERVGISQMHVSRLLAKSLARLRDQLE
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: sigF mutant is attenuated in mice (Geiman et al., 2004).
COG COG1191K, under K: Transcription
References
Geiman et al., 2004: Geiman DE, Kaushal D, Ko C, Tyagi S, Manabe YC, Schroeder BG, Fleischmann RD, Morrison NE, Converse PJ, Chen P, Bishai WR. Attenuation of late-stage disease in mice infected by the Mycobacterium tuberculosis mutant lacking the SigF alternate sigma factor and identification of SigF-dependent genes by microarray analysis. Infection and immunity. 2004; 72(3); 1733-1745. [PubMed: 14977982].