Search: for Help
About
Introduction
Statistics
Your PHIDIAS
Register or Login
Philert
Submission
Curated Data
Victors
BBP (Brucella)
Phinfo
Phinet
HazARD
Data Analysis
Phigen
Pacodom
BLAST
Help & Documents
Documents
FAQs
Links
Acknowledgements
Disclaimer
Contact Us
UMMS Logo

yibD

Victor ID 2786
Gene Name yibD
Sequence Strain (Species/Organism) Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
NCBI Gene ID 1255231
NCBI Protein GI 16766992
Locus Tag STM3707
Protein Accession NP_462607.1
Other Database IDs UniProtKB-ID: Q8ZL53_SALTY
UniRef100: UniRef100_B4SXB8
UniRef90: UniRef90_B4TZV8
UniRef50: UniRef50_B4SXB8
UniParc: UPI00000CD4B2
EMBL: AE006468
EMBL-CDS: AAL22566.1
RefSeq_NT: NC_003197.1
GenomeReviews: AE006468_GR
KEGG: stm:STM3707
NMPDR: fig|99287.1.peg.3583
HOGENOM: HBG417197
OMA: QDIPWTT
ProtClustDB: PRK10073
BioCyc: STYP99287:STM3707-MONOMER
Taxonomy ID 99287
Gene Starting Position 3901353
Gene Ending Position 3902387
Gene Strand (Orientation) -
Protein Name predicted glycosyl transferase
DNA Sequence 
>gi|16763390:3901353-3902387 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome
GCTAAGACAGATTGAGCGCCTTACGGGCCATACGACGGTGCGACAAGGTTTTGTCGCGCCATTGCCACAG
CCGGAAGGACCAGAGCAGCGTCTGATAAGCTGCTTTCGCGCTGCGGACGTTAGCCATCATCCGTCTATAC
ATGCCAGAAGTAAAAATTTCGGCAATCATACGCTGGCGGGTCAAAATATCAGGCTCTTTACGTACCGCAT
GACAAACGCGTAACGCTTCCCAGGTAATTTGCTGGCGAAATTCCGGGTAAATCGGAATACGACGGGCATA
ATCACGATTGAGCTTTTCTAATAATCGCGTAATTTTAATATAATGCCGCTGATAATTAAGATTTTTATTG
CCTTGTCTTTGCAAACGGCTTACCGAATTATCATGCAGGAAATATTTATATAATGATTGTTCGGTATAAC
GTACGCGCGTGGCATTAAACATAACTTCCGTCGACCATAATATGTCCTGATGATGTAGTCCGGGAACGAA
AGTAATATTGTTATCGGTAATTAACGCACGTCGATAAACGCCCATCCAGACAACATGCGTCCAGCGCCGC
GAGGCCAACGCCATACGCAACCAATCCGGTCCGCTTAATACCCCGGTGGAACGCAGACGATCGGTCGGAA
TAGATTGCCAGGCGTGCCCGGTTTTTCGGACGCACCAGTCCGCATTACACTGCGCAACGTCCAGATCATC
GTTAAGCGCCATAGTCATCAGCGTTTCATACATCTTCGGGTAGACCTGGTCATCCGCATCGACAAAGGCG
ACATAATCGCCGGTCGCCGCTTGCAGGCCAAGATTACGGGCGACAGATGCGCCAGCATTGGCCTGATGAA
GCAGTCGAACATGTGGGTAATGTTCCGCGTAATGTTTTGCTATCTCAACGGAATGATCCGTCGATCCATC
ATTCACAATAATAATTTCCAGCGCCGACCACGTTTGCGCGATTAACGACGCCATGCAAGCATTAAAATCC
GCTCCCGCATTATATAACGGGACAATGATACTCACTTTGGTTTTACTATTTTTCA
Protein Sequence 
>gi|16766992|ref|NP_462607.1| glycosyl transferase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] MKNSKTKVSIIVPLYNAGADFNACMASLIAQTWSALEIIIVNDGSTDHSVEIAKHYAEHYPHVRLLHQANAGASVARNLGLQAATGDYVAFVDADDQVYPKMYETLMTMALNDDLDVAQCNADWCVRKTGHAWQSIPTDRLRSTGVLSGPDWLRMALASRRWTHVVWMGVYRRALITDNNITFVPGLHHQDILWSTEVMFNATRVRYTEQSLYKYFLHDNSVSRLQRQGNKNLNYQRHYIKITRLLEKLNRDYARRIPIYPEFRQQITWEALRVCHAVRKEPDILTRQRMIAEIFTSGMYRRMMANVRSAKAAYQTLLWSFRLWQWRDKTLSHRRMARKALNLS
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: yibD mutant is attenuated in mice (Lawley et al., 2006).
COG COG0463M, under M: Cell wall/membrane/envelope biogenesis
References
Lawley et al., 2006: Lawley TD, Chan K, Thompson LJ, Kim CC, Govoni GR, Monack DM. Genome-wide screen for Salmonella genes required for long-term systemic infection of the mouse. PLoS pathogens. 2006; 2(2); e11. [PubMed: 16518469].