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ratB

Victor ID 2731
Gene Name ratB
Sequence Strain (Species/Organism) Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
NCBI Gene ID 1254036
NCBI Protein GI 16765834
Locus Tag STM2514
Protein Accession NP_461449.1
Other Database IDs UniProtKB-ID: Q8ZN56_SALTY
UniRef100: UniRef100_Q8ZN56
UniRef90: UniRef90_A9N213
UniRef50: UniRef50_Q9XCJ2
UniParc: UPI00000CD24A
EMBL: AE006468
EMBL-CDS: AAL21408.1
RefSeq_NT: NC_003197.1
GenomeReviews: AE006468_GR
KEGG: stm:STM2514
NMPDR: fig|99287.1.peg.2428
HOGENOM: HBG469184
OMA: DKAKYWG
ProtClustDB: CLSK894320
BioCyc: STYP99287:STM2514-MONOMER
Taxonomy ID 99287
Gene Starting Position 2634401
Gene Ending Position 2641708
Gene Strand (Orientation) -
Protein Name putative outer membrane protein
DNA Sequence 
>gi|16763390:2634401-2641708 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome
GTTACTCCACGCACGTCGCATAACCCGCTGAGCCTGCCGGCTTAATGGCGCAGTTTTGACTCTTGGTATT
CTCATCTACGCCGCAATACATGCCGCCGCTTGAGGTTGATTTAGATAAATAGGGATAGCCCTGCGTCGGC
CAGCCTAACGAGCTAATTGAATGATACAGCGTCAACAGGTCGTTATTATCCGGTGCTTTGCTAAGGCTAC
CGCACTGTTTGGCAATATCCCATTTCGTGTTGTCCACCGTATGCGCCATCGCCCAGTACTCGTTATTTGC
ATGCACTCCGTTGGTAAATACTGGCGTTACGCCTGACAGCATCTCAGCCTGAAGCCACGGACGATGCAGC
GTTTTTCCGTTGACGGATGTCGTATCCGACATATTTCCCCAGAACAACGCTTTATCCGTATCCGGGCTGG
TAAGTACCATAAAAATCACATCCAGCGATGCGTGAAGAGTCGTATTGTCCGTCACTTTCACCGTGAGTGG
CGTTTTCAACCCCAGGCTTTTATCCTGATTAAGCGTAAACGTTGCCGTACCGTCGCTGCCGGTAGTGCCG
GTAAAGACAATCCCGGTGGTGGTCATACTTTGGCTGGCGCTTGCGGGAGTCAGCTCTTTAAGCATGAGAT
CGTCTGCTCCGGCATCCGCTGCCACGTCGCCATCCGTTATCACCATACCTGCCCGATTTTTCGAATCGCC
ACGTGACAACGTAAAACCGACGTTGGCGACCGGGTTACCGCTGCTATCTTTTACCGTCACCGTTAACGGC
ATCGCGCTTCCCTTCGCCACTACCGCCGCATTTTTCGCGCTGTCCATCGCCGTCGAGGTCAGCGTAATAC
TGGCAGGAGTAGAAGTACGCGGCTCGACCAGACACACCTGAGCGCCGGTGGCAGTCGATGAACTGGCGGT
GCCCTTACCGCCGCTATTCAGGTTTATAAATTGGTAATATCCGGTATTCGGCGCACGATCCGCCGCCCAC
CAGGATTTGTTCCCCGCCACCGGCCAGCCGTAATTTGTACCGATTGCGCCGTTAGGATTGTCGCTATACA
ACGTTTGCAGATCGCCCGACAACGGCTGGTATTCCGCATCACAGCCGGTTGCGCCCGCTTTTTCAGTGTT
CGCTGCGGTGACTAAGGGCCATGTTTCATTGTTAACCAGGTAAGTACCGCTATTCGACGTCATCTCCGCC
GCCAGCAGCGGACGCCGGAACTTCACGCCCGCGCTGTTGGTTACGGTTTCCGGCATGTGTCCCCAGTATT
TAGCTTTATCACTGTCCGGGCTGGTAATGACGGTGAAAATGACGTCCATATCGCTAACTGTCAGCGGATC
GTCGACAAGCATCGCCTGTAGCGGTGTTCTCAGGCCACGGGAATCATCCTGCGTCACTTCGAGTTGCGCT
TTACCATCCTCATCCGTAATGCCATACCAATAACTTGTGCACGAAGATACCGTGCAGTTAAACGTCATTG
AGCCCGTAGACGGCGCAACCGATGTGAGTACCATGCCTCCGCCGGAACTGCCATCAACGACACCCGCCCG
GTCTATCGAAAGCGTTCGTCCCAAACGGATAGCGGTATTGGGCTGCGGCGTGCCGGAACCATCCCTCACA
GTGACGGTCAACGGCAGGCTCTCGCCCTTCTTCGCCACTGGAGCGCCTTTATCCGCATCCATGTCGCTGG
AGGTGAGTTCTATCGACAAGTCCCGGCGCTTTGCCAGACAAAGCTGCGCCGTGGCGGTATTGGCTTTGGT
TGTCAGCGTATTATTATCGCTGAGTCTGACATACTGAAACTGACTGTCTGAGTGCGTGGCATCCGGTACT
GAGTTACCCGCCCCCCAATATTTTCCTGATGCCACCGGTAGGCCAAGCGTTGTCGTGAGTGCGCCATTGG
GATAATCGGTATATAGCGTCTGTAAATCATTTACCGTCGGCAACCCCAGCCGATCGCACGGGCTGGCGGT
GTCCTGATACATATTCGGATAACGGCTCCAGGTATACCAGGTCTCGTTATTTTCCGTATAACCCGACGTG
TCCGCCGTTGAAGAAAGTTCAGCGCGCAGCAGCGGTCGCTTAAATTCAACCCCCTTACTGTTGGTAAAGG
TTTCCGGCATATGGCCCCAGTATTTGGCCTTATCGCTGTCCGGGCTGGTCACTACGGTAAAGATTGCGTC
TTTGCTGTCTGTCAGGTTGCTGCCGTCCATCGTGGCGGCGCTGATAGTGGTTTTTAAACCGGCGGTACTG
TCCTGCGCAAGGGTAAATGTCACCTGTCCCTGGGCATCAGTTTGCGCATACAGATATTTCGCCGAGGTAT
CCAGCAGGTATGTCGCCAGGCCGGACGGCATCACATTACGCAGCGTAATATCGTCTGTGATGCTTGAGGA
CGATGTGGCGCTGTTGGCGCGATTGTACGAAGATCCGCGGCTGATTTTCACCATCACGTTTTTCATCGGC
TGACCTGCGGCGTCTTTCACGTCGATGGTGGCGGCCATCTGCTCGCCCTTCTTCGCCTTTGCGCTTCCGG
TGGTTTCATCCTGGCCTGCCAGCGTCAGCGTCAGGCTGGCGGCGGCGCTGCGCGGCGAGGCAAGACAGGT
CTGCATGTAGTACATCGAGGTGCTGGTCGTCGTTTTGACATCATTGCCGTCGTTAAACAGGTTGACCGCC
GCATAGAGCGACTTCGTGCCGTCTGACGATATCACGTAATCCCCCGCCCACCAGTAGCGGCTGACGTTGT
TGTTGCCTGAACTGGTCATCGGCCAGCCGTTACGGCTGCGCATGGCGTTATCCGGGTATGTCCCGTACAG
TGTCTGGAGGTTGGCTACGGTCGGTAGCGTGTCGCGCCCACAGCCGCCACCGGTGCCGTTCCAGGCTTTA
TCGACGGTTATCATGCCCCAGGTTTCGCCTTTGTCGTAGTAGCCGTTGGCGATGGTCAGCGTTTTGCCGG
GCGTAGCGCTAAACTCGCTGGCCAGCAGCGGACGCCTGTACGCCACGCCGCTGCTGTCGGTCAGCGTTTC
CGCCATATGGCCCCAGTAGTTGGCCTTCGGCGTGTCCGGACTGGTGACCACGGTAAAGATGACCGGCAGC
GGCGCGCTCGTTACGCCGTTGTGTTCTATCGCCGCCGTCAGCGGCGTTTTAAAGCCCGCGCCGCTGTCCT
GGCTGATATTCAGCGTCAGTGTGCCGTCGGCGCCCGTGGCGGTGTAATAGTTAGCGCCGCTGCTACGCCC
GTCGCTGTGGTTTATCTGTATATCCGCCGCCGCCGAGCTATTCACCTCCTGATTCGCGCGCCCGACGCTG
TCGCCGCGCGTAAAGATAACCGGCGTGTCGGCGGCCGGGTTGCCCTGGGCATCCCGCGTGGTGATGATGA
CCGGGATGGTCTCGCCGACTTTCGCTTTGGCGAATCCGTCGCTGTCGTTATACACAGGCGAAGTGAGCGT
TATCTGCGTCGCCGCCGGATGGGCGTTTTGCAGGCAGACAAAATAGAGTTGTTCATTCCACAATAGCGAA
CCGACGCCGCCGTCGCGCAGATTAATCGACTTAACGTAGCGGTTTTGCGTACTCCGGCTCAAATCGGCGG
TGCTGTCCTGGTAGTTTTTACCGTCCAGCGGCCAGCCCTGCTGCGTATTCATGGCGCCGCCGGGCCTGGC
GTCGTACAGCGATTGCATATCGGCAAGGGTCGGCACGTATCCCGCGCCGCAGGCGTCGTTCGCCATTTCA
AAATCGACGATTCCCCACGCTTCGTTGTTTTCCGTATTGTCGCCGTGGGTAACGCCGCTGGCGATTTCAG
CCGATAACAGCGGGCGCTTAAACACCTCGCCGTTGGCCGCCGTCGTCGTTTCCGGCATATGGCCCCACAT
TTTGGCTTTGTCGCTGTCCGGGCTGGTGACCACGGTGAAAATAGTGTCGATGCTGGCCGTCGCGCTGGCG
TTGTCGTACAGCGCCGCCGTAATCGCGACTTTCGTCCCGTGGGTGTCCGGGCGGGTGACGTTGATGATTT
TGCTGCCGTTTTCACCGGTCATGCCGCCGATTTTGGTGGCGGTGTCGTTGAGCGAATCGCCGTCGATCAC
CACCGCCGAGACGATGCCGTCGCCGCTACCGGCGATATGTTTCTCCCCCTGGCGGGTATAGCCGTCGCCG
CGGCTTAACACGAACGGCGCTTGCGGCAGCGGATTGCCGCTGGCGTCTTTTACCGTCACTTTAAGCTGGA
GCGTATCGCCCTTTTTCACCTTCACCGCGTGTTCGCTGTTTGCGTTATACCACAATGCCGCATCCACCGG
CTCAATGGTGATAGACGCCGCCGTCGGATTTTTGCTGACCAGACAGCTCACGTAGTCCGACGCATCGCCG
GAAGCGGTATAGCCGCCCGCAGCCAGTGATACCGCCTGCCATGTAGCGGCGCTGGCGAAGGTGGATGACC
AGTAGTCATACTCAGTCGGCCAGCCGGATACGGTGTGGATTTTATTGCCGTCGCTGGAGGCATACAGTGC
GGCAAGCTGATCGGCGCGCGGCAGATGGCCGGCCTCGCAGCCCCCGGCGTTGGGGTTATTCAGCGCGTCG
GCGTGGCTGACACGCGCCCAGGTTTCGTTATCCTGCTCCTGGGTACGGGTGGCGGCAGTCGCTTCCGCCG
CCAGCTTTGGCCGCTGGAATTTCATATCACCCACGGTGAGCGTGTCCGCCATATGACCCCACATCTGCGC
CTCCGGCGTATCGGGGCTGGTGGCAACGGTAAATTTCACGCTGCGGTTGACGGGCGTGGTAATCAGTGAG
TTGACCGGCAGTACGCTCAGCGGCGTCAGCAAGCCCACGCCCTGCGGCTGTTCAATCACCAGCGTGGCGT
TGCCCTCGGCATCGGTCATGCCCTGGTACGTCATCGACGCCTGGGAAGAGCCGAAAGGCGTTCCGCCCAT
CACCAGCGTTCCGTCGCTGGGATCGGTAAAGCCCGTGGTGGCGTTGTCGCGATTTTTGCCGTGCGACATG
GTGACGGTAAAGCTGGCGTTAGGCACGCTTAACCCATTCAGCGCATTGACGGAATGGACGTTCATCGTGA
TTTGTTCGCCGACTTTGGCTACCGCATTGCGTAACGACTCATCGCCATTAAAGTAAACGTCCAGACTGGT
CACCAACTCATTGCCGGAGCAGGAGAGATAGTTCGGTTCGGTGCCGCTGAACGTGCTGTCCGCACCGGTC
GCCAGGTTGACGTGCGCGGTGGTGGAACCATCAGTATCCGCCGCGATATAGCTGTGTTTCTGCGTCGGCC
AGCCGTAGGTCGTTTCCATCGCGTTGCCGGAATGGGCCTGATACAGCGTATCCAGCAACAGTTGCCCCGG
CACCTGGCCGGTACCGCACTGGTTCGTCGCCGCCGTTACCGAGTTAAACGTCGCCCAGTATTCGTTATTC
TCAAATTCGGAACCGGTATCCTGCGCGGCTTCGTCCGCCAGCAGCGGGCGTTTGTAGATATTGCCCGCTT
CCACCACGCCCTGCATATGGCCCCACATGCGCGCCTGCGCCACGTCCGGGCTGGTGACGACGGTAAAAAT
CACGTTCTGCGTCGCTTCCGTGCCGTCGAACAGCACCACGCGCACCGGGGTTAATACGCCCGCCCCCTTG
TCCTGAGTCAACACCAGCGAGAACTGACCGTTGGCGTCGGTGACGCCGTGATAGTGACCGTCGCTGCCTT
CCAGATTGGTGATAATTACCGGATCATCCGTCCACTGATGCCCGCTATCAATATCGGCGTTCTTTTGATT
CTGGCGATTTTGCTCGTCGCCCAGGTAGACGTTAAAGTAGCGATAAGGCAGCGGTTTATTGGTGGCGCTG
TCGGTGACGGTGATCTTCATGTTGATCTCTTCGCCCACCTTCACTTTCGCCGCGTTGACCGTTGAATCAA
AATTATCGGCGCTAATCACTAATTTCGGCGTGACCGCAGGCGGGGCTTTATCCACGCAGCTAACCAGCGA
TTGCGTGGCGTCCGGCATCTGCGTAAGGGCGCGGCTGCGCATATCAATGCTGATATGGTCAGTGGCAGTC
GATCCCTGGGAGGAGGACCAGTACTCTTCGTCACCGGATGTCAGCCCTACCGGCCAGCCGAGGGTGGTGG
CCAGATCGCCGCGCGCAATTTTTAACCCTTCCAGTTGGCGTGCATCCGGCAGAATATCGCAGTGCGCGTC
GGCGTGGCCCCAGTTGAACTGCGCCCAGGTTTCATTGTTGATGCTGGCGGTGCGGTCTTCACTGTCGGTT
TCCGCCGCCAGTTTGGGGCGGTAAAAGGTGTAGCTTGCGCCGTCCACCGTGGCGGTGGACGTCTCTGCCA
TATGACCGTACATGTTGGCGCTGCTGCTGTCCGGGCTGGTGAGGGTGGTAAAAATCACGTCCACGCTGGC
TTTCAGCGCTGGCGCGCTCGACGGGTGCGCTATCAGCGGCGTTTTAACGCCCGGGCCGTTCGCCTGGGTG
ACGACCACGGTCGCCACGCCCTCGGCGTTGGTCGTACCGTGATATTCCGTGGCGGTGGTGGTCAGTTCGG
TGTTGCCGACGCGCACCGGCGCGGCATTGTTTACCACGCCCTGGCGGTTTTGCGCGTCGCCGCGGGTAAT
CACGAAATCAACGTTGCCCTCCGGTTCGCCGCCGCAGTCTTTGGTCGTTACCGTCAGCATGATGCTTTCG
CCCGCTTTGACCTTCGCGGCGTTGAGCGACTCATCCAGATGATCGGCGGCGAGCGTTACCGGGTCGCCCA
CGGCGGGCGCGATATCCACGGCAAACTTTTGATCAAGCACTTCGACCGCCGTGTTATAAGGCACGCCGGT
GCGGGTAAGCAACCACAGCGGCGGTATGGCGGTTGAGGTATCCAGTTGCGACCAGACCACCAGATGGCGG
CCCGCCAGATTCTGCGCGCAGAAACTTATATTGCTGACGGGTTGTGGATCAAGCGGCGTGTCCGGCGTGG
CGGCGTCGGCCCACACCAGCGTAACGGCGGGCGCGCGTTCAGCCTGCCAGGCCAGCGGCGGCACGGCGAA
GATATCGCCTTCGGTGTCGTGCGGATTGGTTAAGGTCAGCGCGCTGCCGACATCACTGGTGCTGAACTGG
CTGGGCTTCGCGGAGTAGTCAACAGGATTCGCCGCATCAGAGCGCAACTGCACGCTGCCCTGATATACCG
GGATCGTTACACTGTCGGCCTGAGGCGGAGTGCCATTAATAGCCGCAGTTTGCTCAGTGAGTTCCTGCCA
TGCGCCGCTGCTTCGCACGGCCTGCGCGAAGAAAGGCGTTAAACTGAGGGCGCATAGCAGCAGCCAGGGT
AAAAAACCGACACACTTTTTCGATTTCA
Protein Sequence 
>gi|16765834|ref|NP_461449.1| outer membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] MKSKKCVGFLPWLLLCALSLTPFFAQAVRSSGAWQELTEQTAAINGTPPQADSVTIPVYQGSVQLRSDAANPVDYSAKPSQFSTSDVGSALTLTNPHDTEGDIFAVPPLAWQAERAPAVTLVWADAATPDTPLDPQPVSNISFCAQNLAGRHLVVWSQLDTSTAIPPLWLLTRTGVPYNTAVEVLDQKFAVDIAPAVGDPVTLAADHLDESLNAAKVKAGESIMLTVTTKDCGGEPEGNVDFVITRGDAQNRQGVVNNAAPVRVGNTELTTTATEYHGTTNAEGVATVVVTQANGPGVKTPLIAHPSSAPALKASVDVIFTTLTSPDSSSANMYGHMAETSTATVDGASYTFYRPKLAAETDSEDRTASINNETWAQFNWGHADAHCDILPDARQLEGLKIARGDLATTLGWPVGLTSGDEEYWSSSQGSTATDHISIDMRSRALTQMPDATQSLVSCVDKAPPAVTPKLVISADNFDSTVNAAKVKVGEEINMKITVTDSATNKPLPYRYFNVYLGDEQNRQNQKNADIDSGHQWTDDPVIITNLEGSDGHYHGVTDANGQFSLVLTQDKGAGVLTPVRVVLFDGTEATQNVIFTVVTSPDVAQARMWGHMQGVVEAGNIYKRPLLADEAAQDTGSEFENNEYWATFNSVTAATNQCGTGQVPGQLLLDTLYQAHSGNAMETTYGWPTQKHSYIAADTDGSTTAHVNLATGADSTFSGTEPNYLSCSGNELVTSLDVYFNGDESLRNAVAKVGEQITMNVHSVNALNGLSVPNASFTVTMSHGKNRDNATTGFTDPSDGTLVMGGTPFGSSQASMTYQGMTDAEGNATLVIEQPQGVGLLTPLSVLPVNSLITTPVNRSVKFTVATSPDTPEAQMWGHMADTLTVGDMKFQRPKLAAEATAATRTQEQDNETWARVSHADALNNPNAGGCEAGHLPRADQLAALYASSDGNKIHTVSGWPTEYDYWSSTFASAATWQAVSLAAGGYTASGDASDYVSCLVSKNPTAASITIEPVDAALWYNANSEHAVKVKKGDTLQLKVTVKDASGNPLPQAPFVLSRGDGYTRQGEKHIAGSGDGIVSAVVIDGDSLNDTATKIGGMTGENGSKIINVTRPDTHGTKVAITAALYDNASATASIDTIFTVVTSPDSDKAKMWGHMPETTTAANGEVFKRPLLSAEIASGVTHGDNTENNEAWGIVDFEMANDACGAGYVPTLADMQSLYDARPGGAMNTQQGWPLDGKNYQDSTADLSRSTQNRYVKSINLRDGGVGSLLWNEQLYFVCLQNAHPAATQITLTSPVYNDSDGFAKAKVGETIPVIITTRDAQGNPAADTPVIFTRGDSVGRANQEVNSSAAADIQINHSDGRSSGANYYTATGADGTLTLNISQDSGAGFKTPLTAAIEHNGVTSAPLPVIFTVVTSPDTPKANYWGHMAETLTDSSGVAYRRPLLASEFSATPGKTLTIANGYYDKGETWGMITVDKAWNGTGGGCGRDTLPTVANLQTLYGTYPDNAMRSRNGWPMTSSGNNNVSRYWWAGDYVISSDGTKSLYAAVNLFNDGNDVKTTTSTSMYYMQTCLASPRSAAASLTLTLAGQDETTGSAKAKKGEQMAATIDVKDAAGQPMKNVMVKISRGSSYNRANSATSSSSITDDITLRNVMPSGLATYLLDTSAKYLYAQTDAQGQVTFTLAQDSTAGLKTTISAATMDGSNLTDSKDAIFTVVTSPDSDKAKYWGHMPETFTNSKGVEFKRPLLRAELSSTADTSGYTENNETWYTWSRYPNMYQDTASPCDRLGLPTVNDLQTLYTDYPNGALTTTLGLPVASGKYWGAGNSVPDATHSDSQFQYVRLSDNNTLTTKANTATAQLCLAKRRDLSIELTSSDMDADKGAPVAKKGESLPLTVTVRDGSGTPQPNTAIRLGRTLSIDRAGVVDGSSGGGMVLTSVAPSTGSMTFNCTVSSCTSYWYGITDEDGKAQLEVTQDDSRGLRTPLQAMLVDDPLTVSDMDVIFTVITSPDSDKAKYWGHMPETVTNSAGVKFRRPLLAAEMTSNSGTYLVNNETWPLVTAANTEKAGATGCDAEYQPLSGDLQTLYSDNPNGAIGTNYGWPVAGNKSWWAADRAPNTGYYQFINLNSGGKGTASSSTATGAQVCLVEPRTSTPASITLTSTAMDSAKNAAVVAKGSAMPLTVTVKDSSGNPVANVGFTLSRGDSKNRAGMVITDGDVAADAGADDLMLKELTPASASQSMTTTGIVFTGTTGSDGTATFTLNQDKSLGLKTPLTVKVTDNTTLHASLDVIFMVLTSPDTDKALFWGNMSDTTSVNGKTLHRPWLQAEMLSGVTPVFTNGVHANNEYWAMAHTVDNTKWDIAKQCGSLSKAPDNNDLLTLYHSISSLGWPTQGYPYLSKSTSSGGMYCGVDENTKSQNCAIKPAGSAGYATCVE
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: ratB mutant are unable to colonize the cecum in mice, but are still able to colonize the eyer's patches, mesenteric lymph nodes, and spleen of mice (Kingsley et al., 2003).
References
Kingsley et al., 2003: Kingsley RA, Humphries AD, Weening EH, De Zoete MR, Winter S, Papaconstantinopoulou A, Dougan G, Bäumler AJ. Molecular and phenotypic analysis of the CS54 island of Salmonella enterica serotype typhimurium: identification of intestinal colonization and persistence determinants. Infection and immunity. 2003; 71(2); 629-640. [PubMed: 12540539].