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shdA

Victor ID 2730
Gene Name shdA
Sequence Strain (Species/Organism) Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
NCBI Gene ID 1254035
NCBI Protein GI 16765833
Locus Tag STM2513
Protein Accession NP_461448.1
Other Database IDs UniProtKB-ID: Q8ZN57_SALTY
UniRef100: UniRef100_C9XC33
UniRef90: UniRef90_B5R572
UniRef50: UniRef50_B5F188
UniParc: UPI00000CD249
EMBL: AE006468
EMBL-CDS: AAL21407.1
RefSeq_NT: NC_003197.1
GenomeReviews: AE006468_GR
KEGG: stm:STM2513
NMPDR: fig|99287.1.peg.2427
HOGENOM: HBG671149
OMA: TADHADS
ProtClustDB: CLSK894766
BioCyc: STYP99287:STM2513-MONOMER
Taxonomy ID 99287
Gene Starting Position 2627588
Gene Ending Position 2633707
Gene Strand (Orientation) -
Protein Name AIDA autotransporter-like protein
DNA Sequence 
>gi|16763390:2627588-2633707 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome
CTTACCAGTTATAGCGCAGATTGAGGCTACCGTTCAGATCGCCAAAGTCATTGCTGCCAGTCTGCCCGGC
AACCTGAGCGCGAACGCTCCACTGCTTATCGATATCTGCCTGCAGACCCACTTTCAGCTCCGCACGGTTA
GCCGGAAGATCCTGTTTCACCGTAGCATCATCAAACGATACCGACACATCATCGCTGGTGTGCAGCCAGT
TAGCTTCAGCAAACGGCTGGATAACCGTACGGCTGCCTTTGTACAGCTTGCCGTCAACACGCAGACCCAG
ACGCGTTGTCCAACTGTCGCCATCCTGACCATCAATCCGGGTGCCGTAGTTATCCTTCACGCTATCCGCT
GAGTAATTCTGCCAGACAACCTGCGCCTGCGGCGTCAGACTGACAGTATTACCGTTGCTAAGCGCAATAT
CGTAGCGATAACCAGTTTCCAGCGAGACGGCGTTAGCGGTTGAATCATAAGATTCAGATCCCGCATCACC
GCTCTCTACGCTGTTGTTGTAGAAACCATATTGGTACCAGCTGTCGACATACGCGCCGCTATGCGTTTGG
GCATCGGCAAACCAGGTGGCATAGACGCCAAGGTTGTAGCCGTCTACGTTGCCGCTACTGGTGAACTGGC
TACCGTCTGCGCCACGGTTACCGGTGCTGTCGGTATCGGCGTTGATGTAGCTCGCCATGACGCCAACGGT
AACGCTCTGCTGGCCGTTACCCCAGGCCAGAATGTCGCCGCCTAACTGGAACTGGGAGTAGTTGCTGTCC
ATATCGATATTGCCGCTGACAGCCTCGGATTCCGCTTTACCCGCTTTGAAGCGCGCCCATACGCTGCCAT
CGGCATTACGATACTGGCTGCCCTCGCGGTCATAGAGGGTCTGCATTTGCAGGTTGCGCGCCATCCACTG
GTTGCCCATGTACGCGCCGATATCCGCACGGTACTGCGGTGCGACATCGCCGCCGTGGTCCGGAGGCGTG
ACATCGCCGCCGTCGCCGCCGTCGTCCGGAGGCGTGACATTACCGCCATCGCCGCCGTCGTCCGGAGGCG
TGACATTACCGCCATCGTCACCGCCATCCGAAGGCGTGTCATCACCGCCGCTGTCGTCATCATCAGACTG
TGCTTTTGACGCCAGATACCAGTCGTTGTCACTTTCATTCCAGTACAGACGGTAGGTATACAGACCGGCG
TTAACCTCATTTTTTAGCTCAAACGCATCGCTGGTCGATACGCCGCCAACATCCACCACTTCGATACCGT
TAGTGGTCTGTGCTCCATCGCCGATGCCGTTGATGTACAGATCGGTGGTGCCGGAAGCATCGCCGGTAAT
GACCAACTTATCGGTTGCCGAATCATCGTCGCCCAGGACGGTATTCAGGTAAAGCGAGCCGCCGTTGCCG
GTGTAATTGCCATCGACATAAAGCGTATTGCCAGGCGTGCTGGAGCTGCTACCACTGGTCATTGTCCCCA
TGTTGATCAGATCGCCATTGAGGGTGAAGATAGCGCCTGTTTCCTCGCTGTTGCCGAAGACCAGCGTCCC
TTCGTTGGTCACCTTACCGTTAACGGTCGTACCATTGCTGCCGCCGAAGGTCGCCCCGGAGGCGACGTTC
ACCGCCTGCTGGCTGCCCATCTCGCCAATCGAGCCGTCTCCGGACAGCCATAGCGTGCCTTCCTGTACGT
TGGTATCGCCGCTATAGGTGTTCGCGCCGCTCAGCGTCAGTTTACCCGCGCCCAGTTTGGTCAGCGATTT
ACCGTCCCAGTCGCCGTTGCCGGTTTTATCGCCCAGTACGCTGGTGACTTCAAAACTGTCGCCTGCGCCC
AGGGTAAACGTGCCGTGTGCTGGCGTCGCTGACGTGGCGGTCGCATTCCAGCTCAGCCCTTCGGTAAGCA
GATATTCTGACGCATCTTCAGGATTGATTGTCCCGGTTACGGTCAGATAGTCCGGCTTGTCAGTGAGGTT
CATCGTCAGGCTGGTAAAGTCGCCGCTGATATCGCTGGTCATATCCATCAGTTTAAAGGACTGGAACTCC
GCGTCGGAGGCGCGCGCTTGCAGGCTGGCGTCGCTGACGACCAAATCGCCGCCAAGCGTGGCGCTGCTGC
CGGTAATCAGCGGTTGCACTGAGTCACTATTCAGCTCAACGTTCAGCGTACTGCCATCTTGCTGAATTAA
CGCGCTGTCGCCGAGATCCAACGAGGTGCCGAGCGCCAGTTGGGTCGTCGCGCCGCTATGAGTGGTGATG
CCGCCCACCGCGCTGACTTCACCGTCTGCGTCCAGCACCAGCGTGGCATTATTGTCTACCAGACCGGTGC
CCAGCGCCGTCGTACTGGCGGCGACCAGCGTACCTTCATTGATGGTGGTGCCGCCGCTGTAGTCGTTGTC
GCCAGAGAGGATCAGCGTGCCTGCGCCTTCTTTGGTCAGCGATTTACCGTCCCATCTGCTACCCGGATCC
AGCGTATCGTCAACGTCTGTCAGTGTAGCCGCAACGTTAAAGCTGCCGTCAGGGTCGCTCAGGGTAAAGG
TGCCGTGGGCGTCGGTAGTGGCGTTGTCTCTGTCCGCATACCAGGAGAGGGAGGCCGTCAGATCATAGTG
GGTGTTGTCTGCTTCATCGACTTTTCCGTCGATAGTCAGGAAGTCAACATCTTCTCTATTCATTCCCGCG
ACGGTCAGATCGTCGAAATCGGTCGTAATGGCGCTGTCGCTGCCAATCAGCGTGTAGGTGTATGCCTCAG
GCGTCCAGCTGTCTGTAACGCTGCCAATGCCGGTAACATTCAGCGTGCCGCCCAGCGCGACGCTGTCGGC
GGTAATCACGGCGTCGTCGGTGGCCGCGCCGAGGTCAATACTTAGCGTACTGCCGTCTTCCTGGGTGAAC
TGGCCCGCGTCAAGGGTGCTGCCCGCTGCCAGCGCGGTAGTGGCGCCGCTATGGGTGGTGACGTTCGCAA
GCTCAAATGCGCCGTTGGCATCCAGTATCAGCGTACCGCTGTTGTCGATATTGCCGCTGCCCAGCGCGTT
GACGTTGGCGGCAATCAGCGTGCCGTCAGTGATAGTGGTGGCGCCGGAATAGCTGTTGTCGCCGCCTAAC
GTCAGCTCGCCGGTACCGGTTTTGACCAGCGAACCGCTGCCGGAAAGCGTATTTTCCAGCTCGCCCTCAC
CGACCTGAAGCACACCGCTGTTGGCAACAGCTCCGGTACCCAGCGAATCCGCATGGTCAGCCGTCAGCGT
ACCGCCGATAATGGTGGTGCCGCCGGAGTAACTGTTATCGCCGCTTAACGTCAGTTCGCCCGTACCGGTT
TTGACCAGCGAACCGCTGCCGGAAAGCGTATTTTCCAGCTCGCCCTCGCCGACCTGAAGCACACCGCTGT
TGGCAACAGCTCCGGTACCCAGCGAATCCGCATGGTCAGCCGTCAGCGTACCGCCGATAATGGTGGTGCC
GCCGGAGTAACTGTTATCGCCGCTTAACGTCAGTTCGCCCGTACCGGTTTTGACCAGCGAACCGCTGCCG
GAAAGCGTATTTTCCAGCTCGCCCTCGCCGACCTGAAGCACGCCGCTGTTGGCAACAGCTCCGGTACCCA
GCGAATCCGCATGGTCAGCCGTCAGCGTACCGCCGATAATGGTGGTGCCGCCGGAGTAATCGTTGCCGCC
GCTTAACGTCAGCTCGCCGGTACCGGTTTTCACCAGCGAACCGCTGCCGGAAAGCGTATTTTCCAGATCG
CCTTCGCCCACCTTAAGCACGCCGCTGTTATCGATATCGCCGCTGCCCAGCGAATCCGCATGGTCAGCCG
TCAGCGTACCGCCGGTAATGGTGGTGCCGCCGGAGTAAGTGTTGTCGCCGCTTAGCGTCAGCTCGCCTGT
GCCGGTTTTCACCAGCGAGCCGCTGCCGGAAAGGATGTTTTCCAGCTCGCCTTCGCCCACCTTAAGCACG
CCGCTGTTGTCGATATCGCCGCTGCCCAGCGAATCCGCATGGTCAGCCGTCAGCGTACCGCCGGAAATAG
TGGTGCCGCCGCTGTAGTTGTTATCGCCGGTCACGATCAGCTCATCGCTACCGCTTTTGACAATTTGGCC
CTCGCCGGTCACGTTGTTATCCAGCGTGCCCTGGCTCAGCGCAAGCGTTGCGCTTTCTGCAATCGTCACA
TCGCCAGTGCCGAGCGCGGCGGCGTCTTTGGCGGCCAGAATGCCGCCGTCAATTTCAGTATCGCCGTAGT
CGTTGCCGGTGTTGCTGAGGATCAGCGTGCCGTCGCCTTGTTTGGTTAGCTTGCTGCCGTTCCAGTTGGA
GGTCGCCGTGGTTTCGTCCAGTTCGCTGGTGACGGTAAAGGTACTGCCTGCATCAACGGTAAAAGTGCCA
TGCGCAGCGCGCGCAGAATTTGCGCCCGCGTACCAACTCAAGCCCGTAGACAACTCGTAGTTGGTATTAT
CATTCGCATCAACGCCCGCGTTGATCGTCAGATAATCCGGCATAGCGGAGGTGTCAGCATCCAGTGTTAC
GCTGTCAAAATCGGTAGTGATTGCAGTTTGCGAATCAATCAGCGTGATCGATCCAAAGTGTTCGTCGGTT
TCGGGCGCGACAAAGGTGGCCGTTGAGCTAAGGTTCAGCGTCCCGTCCAGCGTGACGTTGGCGGCTTTGA
TAATTGGCGCGCTGTTGGCGGTATCCAGCGTCGCGTTTATCTGGCTGCCGTCCTGCAAGGTCAGGGTATT
GTCCACCGTCAGCAGCGTACCTGTCGAACCGCTCGCGTTGCCCAGCGTAATATCGCCGTCGTTGGTCAGA
TTGCCGACGGTTGACGGGTCGGTCATGTTCCACTGGCTGGTGTCGTCGAGCGACAGCGTAGTAAACATCG
CATCTACACTACCGGTTAACGTGGACCCCTGGCTTAAAGAGAGCGATGACGATGACGCGTCAGTCTGGAC
AATGTTGCCGGTCAGCATCGTTTTTTCGGCCTGAATAGTCGCTTTGCTGCCTAATTTGATCGCGGTCGGC
GCCGTAAAGGTGCTGTTGGTGAGCTCAATGGGGTCGTTAATGGTCGTGCTGCCATCAATGTTCAGTGCGA
CAGTTTTTGAGGTGACGTTTGCGTCGCTGACCGTCAGCGCGTTGAGATCCTCATACCCGTCGAGTTTTCT
TTTGCTGGTTATAAAGATACCGTCGCCGTCGGCGTTGATGGTGGCGCCGTCGATCCTGGCGTCCGACGCC
AGAATATACACGCCCGTACCGGCAGAGGTAATGTTGCCGCCTGTAATATCCAGGGTAGTGGCGTTATTGG
CCTGTACCGCCGCGCCGCTGGCATTGGTATGTGTTATGGTCGCGTTGGTGAGATTAAGAGCGGCCTTATT
GGTACCCTGGATGGTGCTCATCGTACCTGCAGAGCTGACCGAGCTATCAGACAGGTTCAGGGTGGAACCC
TCGTCTGTCGCGGTGTTTCCGGCAACAACGTTTATCTGGCCTTGCGCCAGGGTGATTGTGCTACCGTCCA
GCACGTTCAGCGTACTGCCTTGTTGCACCTGCGCGCTGCTGCTGTTAGCTGCCTCAACGATGGTACCGTC
CAGCGTTGCTTCTGAACCCGTATACAACGTCATTACGCCGAAATTGCCGTCAATCGTTAGCGTACTGTCT
GTTAACCTCAGTGTGCTGCCATCCGCTGCGGAAATACCCTGGGTATAAATACCCGTAGTGGTTATCTTCG
CGTCGGTAAGCTCAAGGATAGCGTAATGATCCAGCGAAATGGCGTTGGAAACATACTTACCGCCATCCGG
ATCATCAGCCCCGCCTCCGCTTGTTTCAATGACGAGCCCCGTCCCTGTGACCGTGGTGGGCTGCCAGCCG
ACGGTGGCGACACCCGAGACATATAGCGCCGCGCCTTCATCGGTGCCCGAATAGCTTATCGGCGGCGTTG
ACGCATCCAGAACGTGGGGCTGCGCATCAGCATATGATACCTGATTATCGGCCATAGCCAGCGGGCTGAA
AAATCCGAGCGCCGCAGCCACGGCGCAAGCCAGCGCCGCGCGCGTTGCTTTTATTATTTGTCCATATTCG
GACTTTTGGTTTGGAGAATGGGTTTCACTCGCGCATACTTGCGCTTTAACTTTGCTGTGGCCTCGCGCCA
GTTCTGAAGCCACGACATACATATTTCGCA
Protein Sequence 
>gi|16765833|ref|NP_461448.1| AIDA autotransporter-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] MRNMYVVASELARGHSKVKAQVCASETHSPNQKSEYGQIIKATRAALACAVAAALGFFSPLAMADNQVSYADAQPHVLDASTPPISYSGTDEGAALYVSGVATVGWQPTTVTGTGLVIETSGGGADDPDGGKYVSNAISLDHYAILELTDAKITTTGIYTQGISAADGSTLRLTDSTLTIDGNFGVMTLYTGSEATLDGTIVEAANSSSAQVQQGSTLNVLDGSTITLAQGQINVVAGNTATDEGSTLNLSDSSVSSAGTMSTIQGTNKAALNLTNATITHTNASGAAVQANNATTLDITGGNITSAGTGVYILASDARIDGATINADGDGIFITSKRKLDGYEDLNALTVSDANVTSKTVALNIDGSTTINDPIELTNSTFTAPTAIKLGSKATIQAEKTMLTGNIVQTDASSSSLSLSQGSTLTGSVDAMFTTLSLDDTSQWNMTDPSTVGNLTNDGDITLGNASGSTGTLLTVDNTLTLQDGSQINATLDTANSAPIIKAANVTLDGTLNLSSTATFVAPETDEHFGSITLIDSQTAITTDFDSVTLDADTSAMPDYLTINAGVDANDNTNYELSTGLSWYAGANSARAAHGTFTVDAGSTFTVTSELDETTATSNWNGSKLTKQGDGTLILSNTGNDYGDTEIDGGILAAKDAAALGTGDVTIAESATLALSQGTLDNNVTGEGQIVKSGSDELIVTGDNNYSGGTTISGGTLTADHADSLGSGDIDNSGVLKVGEGELENILSGSGSLVKTGTGELTLSGDNTYSGGTTITGGTLTADHADSLGSGDIDNSGVLKVGEGDLENTLSGSGSLVKTGTGELTLSGGNDYSGGTTIIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLSGDNSYSGGTTIIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLSGDNSYSGGTTIIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLGGDNSYSGATTITDGTLIAANVNALGSGNIDNSGTLILDANGAFELANVTTHSGATTALAAGSTLDAGQFTQEDGSTLSIDLGAATDDAVITADSVALGGTLNVTGIGSVTDSWTPEAYTYTLIGSDSAITTDFDDLTVAGMNREDVDFLTIDGKVDEADNTHYDLTASLSWYADRDNATTDAHGTFTLSDPDGSFNVAATLTDVDDTLDPGSRWDGKSLTKEGAGTLILSGDNDYSGGTTINEGTLVAASTTALGTGLVDNNATLVLDADGEVSAVGGITTHSGATTQLALGTSLDLGDSALIQQDGSTLNVELNSDSVQPLITGSSATLGGDLVVSDASLQARASDAEFQSFKLMDMTSDISGDFTSLTMNLTDKPDYLTVTGTINPEDASEYLLTEGLSWNATATSATPAHGTFTLGAGDSFEVTSVLGDKTGNGDWDGKSLTKLGAGKLTLSGANTYSGDTNVQEGTLWLSGDGSIGEMGSQQAVNVASGATFGGSNGTTVNGKVTNEGTLVFGNSEETGAIFTLNGDLINMGTMTSGSSSSTPGNTLYVDGNYTGNGGSLYLNTVLGDDDSATDKLVITGDASGTTDLYINGIGDGAQTTNGIEVVDVGGVSTSDAFELKNEVNAGLYTYRLYWNESDNDWYLASKAQSDDDDSGGDDTPSDGGDDGGNVTPPDDGGDGGNVTPPDDGGDGGDVTPPDHGGDVAPQYRADIGAYMGNQWMARNLQMQTLYDREGSQYRNADGSVWARFKAGKAESEAVSGNIDMDSNYSQFQLGGDILAWGNGQQSVTVGVMASYINADTDSTGNRGADGSQFTSSGNVDGYNLGVYATWFADAQTHSGAYVDSWYQYGFYNNSVESGDAGSESYDSTANAVSLETGYRYDIALSNGNTVSLTPQAQVVWQNYSADSVKDNYGTRIDGQDGDSWTTRLGLRVDGKLYKGSRTVIQPFAEANWLHTSDDVSVSFDDATVKQDLPANRAELKVGLQADIDKQWSVRAQVAGQTGSNDFGDLNGSLNLRYNW
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: shdA mutants exhibit a shedding defect in mice (Kingsley et al., 2003).
COG COG3468MU, under M: Cell wall/membrane/envelope biogenesis; U: Intracellular trafficking, secretion, and vesicular transport
References
Kingsley et al., 2003: Kingsley RA, Humphries AD, Weening EH, De Zoete MR, Winter S, Papaconstantinopoulou A, Dougan G, Bäumler AJ. Molecular and phenotypic analysis of the CS54 island of Salmonella enterica serotype typhimurium: identification of intestinal colonization and persistence determinants. Infection and immunity. 2003; 71(2); 629-640. [PubMed: 12540539].