Search: for Help
About
Introduction
Statistics
Your PHIDIAS
Register or Login
Philert
Submission
Curated Data
Victors
BBP (Brucella)
Phinfo
Phinet
HazARD
Data Analysis
Phigen
Pacodom
BLAST
Help & Documents
Documents
FAQs
Links
Acknowledgements
Disclaimer
Contact Us
UMMS Logo

wcaM

Victor ID 2716
Gene Name wcaM
Sequence Strain (Species/Organism) Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
NCBI Gene ID 1253620
NCBI Protein GI 16765429
Locus Tag STM2099
Protein Accession NP_461044.1
Other Database IDs UniProtKB-ID: WCAM_SALTY
UniRef100: UniRef100_P26389
UniRef90: UniRef90_P26389
UniRef50: UniRef50_P26389
UniParc: UPI0000138ECE
EMBL: X56793
EMBL: AE006468
EMBL-CDS: CAA40113.1
EMBL-CDS: AAL21003.1
RefSeq_NT: NC_003197.1
GenomeReviews: AE006468_GR
KEGG: stm:STM2099
NMPDR: fig|99287.1.peg.2024
HOGENOM: HBG417270
OMA: HAVNERG
ProtClustDB: PRK10123
BioCyc: STYP99287:STM2099-MONOMER
Taxonomy ID 99287
Gene Starting Position 2180027
Gene Ending Position 2181430
Gene Strand (Orientation) -
Protein Name putative colanic acid biosynthetic protein
DNA Sequence 
>gi|16763390:2180027-2181430 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome
CTTACCCTCCCCGCTTCGGCAGCGAAAAATTCACTGCTTCGACATTCACGGTTTGGTGATTAATCCTGTC
GATATCCACGGAACTCTGCCCGTTTTCATTGATGGCATGAACATTAGCGAGGGAAAGCAGCGTGTCCTGG
CGGGCCATAAATTGACCACGTACATCTTTACGCAAATCGAAATGCATTTTTAACGCCGGGCCAATCGCTG
AAGTTTGCATCACGTTGATATTGCGCAGAAAGAGGTGCTGCGGTTGATTATGCAGTTCCAGCGTAGCACG
CGTCATCCGTACATTGGTGATGGCGACAAAAGAGGGGGTGTTGCCGGAGGAAATTTGAATGCCGCGTAAT
TTATAAGCAACCTGGCGATTATCCAACCGAATAGCGTTTAATTTAAAGTTTTGCGGAATTGACAGGTATT
TTCCTTTAACGACGCCATAGCCGATGAGCATCCCGGCACTATTCGTCATATCAATATTATCAATGACGAA
ATTATCACAGCCATAAATTGCGATCGTTGCGTTATCAATACCCGCATTTTTACTGAAACCGGGCGTGATG
TTTTTGGCTTTGACATTGCGAATGACGAAATGTTTGCCATTTTCTACGTGCACAAGCTGTCGGCAATCAG
ATCCGGTAATATTGGCCACCACAAAGTTTTTTACTGCCTGGTCTTCAGGATAACTGTTGTCATAGGTGCT
ACCCGCCAGCCCGATGCCGATCCCCCAGTTGATTTTGCCATTGGTACAATTAATGCGTTCGATGACATGA
TCGGAAATCAGGATGTCGCGGTCGTGAATCGCGACATTCCACTCAATGGCGTCCCCCTGTAAATCGCTAA
AGCGGCTATGCGTAATCCGCGCGCCATCCATTTGGTTATGAAATCCCTGGCGGAGAATGGCGTAGTTGGC
GTGGGTAACGGTGATGTCATCGATAATGAGATTACGCATCACCTGCGGTTCCTTACCACCGATGAAAATT
TGCGCGACGGGGCCAAAGCCGCTCATCGCCACGCCTTTAATCACACAGTCCGACCCGCGAACATCCAGCG
TCACATTGTGCAGACTGCCGCCCTGCTCCCCCACCACCTGACACCCGTCCTGCAAAATAAACCGTCCCCG
GCCATTCCCACGCACCGCGCCCTGTACCCGCAGCGTTTTTCCCGCCGGAATCGTTATCGCCGCATTGATA
TTTTCACACACCCATCCTGGCGGTACGACCACGGTCTGTCCGTCGGCGAAGGCCTGTTTGAACGAGGCGA
TACCGTCATCCGCCGGATAATCCTTAATATCGACGGTCTCGCGAGGTTCACGCGCCTGTACCGGCAAGGC
GCGCAGAAAAGGAAGAACAGCAAGCGCAGAACCTGCCGTCAGGAGGGTACGTCGGGAGAATTTAGTCGCG
GGCA
Protein Sequence 
>gi|16765429|ref|NP_461044.1| colanic acid biosynthesis protein WcaM [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] MPATKFSRRTLLTAGSALAVLPFLRALPVQAREPRETVDIKDYPADDGIASFKQAFADGQTVVVPPGWVCENINAAITIPAGKTLRVQGAVRGNGRGRFILQDGCQVVGEQGGSLHNVTLDVRGSDCVIKGVAMSGFGPVAQIFIGGKEPQVMRNLIIDDITVTHANYAILRQGFHNQMDGARITHSRFSDLQGDAIEWNVAIHDRDILISDHVIERINCTNGKINWGIGIGLAGSTYDNSYPEDQAVKNFVVANITGSDCRQLVHVENGKHFVIRNVKAKNITPGFSKNAGIDNATIAIYGCDNFVIDNIDMTNSAGMLIGYGVVKGKYLSIPQNFKLNAIRLDNRQVAYKLRGIQISSGNTPSFVAITNVRMTRATLELHNQPQHLFLRNINVMQTSAIGPALKMHFDLRKDVRGQFMARQDTLLSLANVHAINENGQSSVDIDRINHQTVNVEAVNFSLPKRGG
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: wcaM mutant is attenuated in mice (Lawley et al., 2006).
References
Lawley et al., 2006: Lawley TD, Chan K, Thompson LJ, Kim CC, Govoni GR, Monack DM. Genome-wide screen for Salmonella genes required for long-term systemic infection of the mouse. PLoS pathogens. 2006; 2(2); e11. [PubMed: 16518469].