Search: for Help
About
Introduction
Statistics
Your PHIDIAS
Register or Login
Philert
Submission
Curated Data
Victors
BBP (Brucella)
Phinfo
Phinet
HazARD
Data Analysis
Phigen
Pacodom
BLAST
Help & Documents
Documents
FAQs
Links
Acknowledgements
Disclaimer
Contact Us
UMMS Logo

yciF from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2

Victor ID 2686
Gene Name yciF from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Sequence Strain (Species/Organism) Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
NCBI Gene ID 1253248
NCBI Protein GI 16765073
Locus Tag STM1729
Protein Accession NP_460688.1
Other Database IDs UniProtKB-ID: Q7CQF9_SALTY
UniRef100: UniRef100_B4T6X4
UniRef90: UniRef90_B4T6X4
UniRef50: UniRef50_P21362
UniParc: UPI0000059F4C
EMBL: AE006468
EMBL: AJ251362
EMBL-CDS: AAL20647.1
EMBL-CDS: CAB71037.1
RefSeq_NT: NC_003197.1
GenomeReviews: AE006468_GR
KEGG: stm:STM1729
HOGENOM: HBG334385
OMA: KVEQLEI
ProtClustDB: CLSK879985
BioCyc: STYP99287:STM1729-MONOMER
Taxonomy ID 99287
Gene Starting Position 1825829
Gene Ending Position 1826332
Gene Strand (Orientation) +
Protein Name putative cytoplasmic protein
DNA Sequence 
>gi|16763390:1825829-1826332 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome
TATGAATATCAAAACCGTTGAAGACCTTTTTATCCATCTACTTTCAGATACCTATAGTGCAGAAAAACAA
TTAACCAAGGCTCTTCCTAAACTTGCCAGAGCCACGTCCAATGAAAAATTAAGCCAGGCCTTTCAATCTC
ATCTTGAAGAAACCCAGGGTCAGATTGAACGTATTGATCAGATCGTCGAATCTGAATCTGGCATTAAACT
GAAAAGAATGAAATGCGTCGCTATGGAAGGGCTGATTGAAGAAGCCAATGAAGTCATCGAAAGTACGGAG
AAAAACGAAGTACGCGATGCAGCGCTTATCGCCGCGGCGCAAAAAGTCGAGCATTACGAAATCGCCAGCT
ACGGCACGCTAGCCACCCTGGCCGAGCAGCTCGGCTATAGCAAAGCATTAAAACTGCTCAAAGAAACCCT
CGACGAGGAAAAACAAACTGATTTAAAACTTACCGATTTAGCAGTCAGCAATGTTAATAAAAGTGCTGAA
CGCAAATCGAAATA
Protein Sequence 
>gi|16765073|ref|NP_460688.1| cytoplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] MNIKTVEDLFIHLLSDTYSAEKQLTKALPKLARATSNEKLSQAFQSHLEETQGQIERIDQIVESESGIKLKRMKCVAMEGLIEEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTLATLAEQLGYSKALKLLKETLDEEKQTDLKLTDLAVSNVNKSAERKSK
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: yciF mutant is attenuated in pigs (Carnell et al., 2007).
COG COG3685S, under S: Function unknown
References
Carnell et al., 2007: Carnell SC, Bowen A, Morgan E, Maskell DJ, Wallis TS, Stevens MP. Role in virulence and protective efficacy in pigs of Salmonella enterica serovar Typhimurium secreted components identified by signature-tagged mutagenesis. Microbiology (Reading, England). 2007; 153(Pt 6); 1940-1952. [PubMed: 17526851].