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sbcD

Victor ID 2602
Gene Name sbcD
Sequence Strain (Species/Organism) Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
NCBI Gene ID 1251915
NCBI Protein GI 16763776
Locus Tag STM0396
Protein Accession NP_459391.1
Other Database IDs UniProtKB-ID: Q8ZRE2_SALTY
UniRef100: UniRef100_B5N0F9
UniRef90: UniRef90_B4SWN6
UniRef50: UniRef50_P0AG77
UniParc: UPI00000CCEB4
EMBL: AE006468
EMBL-CDS: AAL19350.1
RefSeq_NT: NC_003197.1
GenomeReviews: AE006468_GR
KEGG: stm:STM0396
NMPDR: fig|99287.1.peg.382
HOGENOM: HBG677966
OMA: MGKLRSV
ProtClustDB: PRK10966
BioCyc: STYP99287:STM0396-MONOMER
Taxonomy ID 99287
Gene Starting Position 449377
Gene Ending Position 450579
Gene Strand (Orientation) -
Protein Name exonuclease subunit SbcD
DNA Sequence 
>gi|16763390:449377-450579 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome
TTCATGCCTCATGCTCCTCATTCAACGCGTAGAGCGTGCTGGAAAAGAGCTGATTCAGGCGCTCGCGCTG
CGGGGGATCTAACGCTTCCAGCGCCAGACGCCGCGCAAAAACCTCCTCCACGCTAAGCTCGCTTAATGTT
TCCCGCCGCTCGTTCGCCAGCGAGCGCTCGCGCTGTTCGCGGCTACGGCGCACCAGTAATACCTCTACGG
GGAGTGACTCCGTTAATGTCTGTATTCTGCGTTGGATATCGTGCAGATAATCATCGGTGGTGATTTCAAT
ATCCAGCCAGACGGGGGGCGATTGCTCAACGCCGCGCCACTGCTCAAGCTGTTCGGTAATTGACGCCAGG
TCGCCTTTTAAAACCGCCAGCGGTTGAGTCACGGGGACAGCCAGACTTTCGGTACTTTGCCATTTCCCCT
GCTCGAAGGTCACCAGATGCACGCATTTGCTTTTGCCGCACTCATCAAAGCTGAGGGCGATGGGTGAGCC
GCAATAGCGGATATGCTCCGTGCCGCCGACACATTGCGCGCGGTGAATGTGTCCCAATGCGATATAATCC
GCGGGGGGGAAATGCTGCGCCGGAAAGGCATCCAGCGTACCGATATAAATGTCGCGAACCGCATCGCTTT
TGCTGGCGCCGACGGTGGTTAAATGTCCCGTCGCGATAACCGGCAGCTTTCGTTCGCCGCGTAGCTGGCA
CGCTTCCTGATACTGCTGTTGATAATAATCGGCAATCGCATGAAGAAGTTGCTGCTGTTTCTCGCTGCCG
GATAATCCCGCCTGACTGGTAATAATGTCGCGCGGGCGCAAAAAGGGAATGGGGCACAGTACGGCGCCCG
GAGACCCGTCGCGACGATGAAGTAGCCGCGGCGCATAGCCCGCGCTGGCGATCACGGTTGTATTGAGAAA
CGCCAGAATGTCGCGCGATTCGTTTAGCGTGGCGACGGAATCATGATTACCGGCCAGCACCACCAGATGA
CAGCCCGTTTGCTGTAAATTAACGACGAAACGGTTATAAAGTTCTCGGGCATAGCTTGGAGGCGAACCGG
TATCAAAAATATCGCCAGCGACAATAATGGCATCCACCTGATGGGCCTGCGCGGTCTCCAGCAGCCAGTC
CAGAAAAGCCTGATGCTCCGCGGCGCGGCTTTTACTGTAGAAATTTTGTCCCAGATGCCAGTCAGAGGTG
TGGAGGATGCGCA
Protein Sequence 
>gi|16763776|ref|NP_459391.1| ATP-dependent dsDNA exonuclease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLETAQAHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDILAFLNTTVIASAGYAPRLLHRRDGSPGAVLCPIPFLRPRDIITSQAGLSGSEKQQQLLHAIADYYQQQYQEACQLRGERKLPVIATGHLTTVGASKSDAVRDIYIGTLDAFPAQHFPPADYIALGHIHRAQCVGGTEHIRYCGSPIALSFDECGKSKCVHLVTFEQGKWQSTESLAVPVTQPLAVLKGDLASITEQLEQWRGVEQSPPVWLDIEITTDDYLHDIQRRIQTLTESLPVEVLLVRRSREQRERSLANERRETLSELSVEEVFARRLALEALDPPQRERLNQLFSSTLYALNEEHEA
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: sbcD mutant is attenuated in pigs (Carnell et al., 2007).
COG COG0420L, under L: Replication, recombination and repair
References
Carnell et al., 2007: Carnell SC, Bowen A, Morgan E, Maskell DJ, Wallis TS, Stevens MP. Role in virulence and protective efficacy in pigs of Salmonella enterica serovar Typhimurium secreted components identified by signature-tagged mutagenesis. Microbiology (Reading, England). 2007; 153(Pt 6); 1940-1952. [PubMed: 17526851].