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stbC

Victor ID 2600
Gene Name stbC
Sequence Strain (Species/Organism) Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
NCBI Gene ID 1251857
NCBI Protein GI 16763718
Locus Tag STM0338
Protein Accession NP_459333.1
Other Database IDs UniProtKB-ID: Q8ZRI1_SALTY
UniRef100: UniRef100_Q8ZRI1
UniRef90: UniRef90_B4TZA9
UniRef50: UniRef50_B5FJY8
UniParc: UPI00000CCE90
EMBL: AE006468
EMBL-CDS: AAL19292.1
RefSeq_NT: NC_003197.1
GenomeReviews: AE006468_GR
KEGG: stm:STM0338
NMPDR: fig|99287.1.peg.324
HOGENOM: HBG511492
OMA: YRVNNVT
ProtClustDB: CLSK893937
BioCyc: STYP99287:STM0338-MONOMER
Taxonomy ID 99287
Gene Starting Position 381034
Gene Ending Position 383595
Gene Strand (Orientation) -
Protein Name putative fimbrial usher
DNA Sequence 
>gi|16763390:381034-383595 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome
GCTATTCCTTCTCGCAGATTTTGTTCAGATAGAGAAACGGTTCTTTGGTGTGAAGATCGAGTTGGTAGGC
AACCCGGCAACGCTGGTTTGCCCCTGTTCCCCAGCGCACCAGTAGAGAACCCGACGGATGGGCGATACGG
GCATAAATCTGCCCACTCTGGCCGACCATGCCGATGTTTGTGCCTTCACCGTTGAAAACATCAGCGCCCA
TTGGCGGTATGCCGCCATCCGGCATCTTCACGGAGATCAGCACTGCTTTGCCGCTGATAGTGGCGAAATT
GACACGCGCGATGGCGCCAGCATACGGCACAATCTGCTGACTTCCTCCCGTCAGTTCGGCATCGCTGCGC
ATCTTACGGGTATCGAGCGTAACGTTATTGACGCGGTAAGGAGATAACGAAGGCAGAATGGCGTAACCAA
AGCGATCAACCACAGCGCCCTGGCCATTTTGTACGATCGCGCCCTGCGCGCCATCGGCATGAATAAGCGC
AAAGGTATCGCTGGTATAGGGGCCAGCCGTCAGACCGCCAGGGTGAAGAACCAGGGTGCCGGACGCGCCC
AGCCCTTCCTGACGATAGTTATCACCCTGGTCATAGTTGGCGCGAAGTGCGCCAAACCGGGTGTTTTGTT
GTAGATTACCGCCAAACGTCGTTGGCGCGCTGCTATCACTATTGCTATTGCGATAACGCTCGTAGCCGCC
ATAAACCGACCATGACAGGTCGCTGTTTTCACCGCTACTGCCGGTCATGGATACGGTTGAGGAACGACTT
TGACTGGACTGGTTATAATTCATGGCGACAGACGTTCTGTTTTCGCCCCAATCCAGCGGTATAGAGACAT
TAAACGACATTGTGGTTTCGGTATATTTTTGTCGGCTACTCACGTCCAGTGGTTCGTTAACGCCGTGATA
AAAGCGATCGTAATCCCAGGTGGTGCGCTGTCGTGCGATATTCACCCCGTAGCTTATATTCCGCCACTGG
TTGCTATATCCCATTTGTAGCTGTGTTATACGCGATTGGTTATTGTAGTAGTCTGCGGTGCTGGCGCTGA
GGTTAAGCGTGCCAAGCCGTCCTAACGGCTGGCTTACCGTCGCGGACAGGCGATTGCGCTGATGCAGCGT
GTCGGAGTAGTAATCAATCCCCGTTTTTGCTTCCCGGCGTACGCCGAGCACGTCCTGAAGATCGCGAAAG
CCGTTGGTTGAATAACGATAAGCCGCCAGTACCAGGTTAGTGCCGGTGGTAAACGTTTTGCTGTAACTGA
GTTCCGCGCGCCAGCCTTGTTGGCGATCGTTATGCTCTGCGCGCGCATTCGACCAGGTGGCGTTAAGGCC
GAACGCGCCCATACCGGTGGCCCAGACGCCGCCCGCCAGCCATGCCTGGTAACGCTGCGCAATTCGTGAA
CCGAGGTTGAGGGTAATGGTGTTATTAACGCCGTGCTGGAACGTTCCCTCAAAGAAACGATTTTCAATAT
CGTAGTACTGACGAACCCTGCCGAAGGCCAGCGAATAGTGCCAGTTACCGGGGCGAACCGAATCCGGCAC
GGAAGAATAAGGCACGGTGAAACGTGAGGTTTTACCGCTGGCCTCGATAACCTCTACCTCCAGATCGCCT
TGATAACGGGTGTTGTACAGATCGTCAATATAAAATGGGCCCGGCGGAACGTTGGTTTCATAAATCACTT
TCCCCAGTTGTTTTACTACCACGTGCGCGCTACTGGCCGCTACGCCCCGAACTTCCGGCGCATAACCGCG
TTTGCCCTGCGGGCGCATCCGCTCGTCGGTGACAAGTTTAGCCCCGTTAAAAGACAGACTGCCGAATAAG
CTGGAGTCCGTATAGCTATCGCCCAGCGACAGAATACTGTTAACAGACGCGACAGGTCTTTGCACCCAGG
TTCGAACGCTATTATAGCGCCAGGCGCTTCCGCTCTGGTTGCTATTGGCATAGCGCAGATTACTTTGATG
ACGGACCTGCCAAAGTCCGAGGTTAACGCCCATGTTTAAACCGCTCCATAAGTATTGGTAGCGATAATGG
CTGTCGGTATTTTCGGTGTGGGTCCAGTTTGTGTTATGGCGTAAAAACAGCGCCAGCGCGCCGCTATCCC
ACTCTGAAGGAGAGATATAACCGCGCGGTTTGTGCGTAAGTTCGGTCATTGGAATCGTCAGCAACAGGCG
AAGCGTGGCGCTATCAAATTGCCAACCGGCATGAGGCACCCACTCCCTGAGCGGGCGACACTCGGTCGCA
GCGTCGGTCGCGGGGAGTGATTTTATCTGTGCCGCTTTCATCACCGATAAGGGCAGGCAGGGTTCAGTCT
GTTGACCCTCTTTTACAGCATTAAATCGAATATTAGTGCTCGAGGTTACCAGCGTGCCATTAACGTAAAC
GTCGGCAAGATAGTCTCCGGAAGGCGTTTGCCGTTCATTAAAACGGGCAATATTTTGTCCGTAAGTGGCC
CCCTGAAGTAGCGCAGGATCAAAATAATACTCTTCACCTTGCGCGGAGCCTGAGCAAACTATGGCGATCA
ATAGCGCAAGGCTTTTGCGGTTCAAATTAATGGTGGGGGACA
Protein Sequence 
>gi|16763718|ref|NP_459333.1| fimbrial usher [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] MSPTINLNRKSLALLIAIVCSGSAQGEEYYFDPALLQGATYGQNIARFNERQTPSGDYLADVYVNGTLVTSSTNIRFNAVKEGQQTEPCLPLSVMKAAQIKSLPATDAATECRPLREWVPHAGWQFDSATLRLLLTIPMTELTHKPRGYISPSEWDSGALALFLRHNTNWTHTENTDSHYRYQYLWSGLNMGVNLGLWQVRHQSNLRYANSNQSGSAWRYNSVRTWVQRPVASVNSILSLGDSYTDSSLFGSLSFNGAKLVTDERMRPQGKRGYAPEVRGVAASSAHVVVKQLGKVIYETNVPPGPFYIDDLYNTRYQGDLEVEVIEASGKTSRFTVPYSSVPDSVRPGNWHYSLAFGRVRQYYDIENRFFEGTFQHGVNNTITLNLGSRIAQRYQAWLAGGVWATGMGAFGLNATWSNARAEHNDRQQGWRAELSYSKTFTTGTNLVLAAYRYSTNGFRDLQDVLGVRREAKTGIDYYSDTLHQRNRLSATVSQPLGRLGTLNLSASTADYYNNQSRITQLQMGYSNQWRNISYGVNIARQRTTWDYDRFYHGVNEPLDVSSRQKYTETTMSFNVSIPLDWGENRTSVAMNYNQSSQSRSSTVSMTGSSGENSDLSWSVYGGYERYRNSNSDSSAPTTFGGNLQQNTRFGALRANYDQGDNYRQEGLGASGTLVLHPGGLTAGPYTSDTFALIHADGAQGAIVQNGQGAVVDRFGYAILPSLSPYRVNNVTLDTRKMRSDAELTGGSQQIVPYAGAIARVNFATISGKAVLISVKMPDGGIPPMGADVFNGEGTNIGMVGQSGQIYARIAHPSGSLLVRWGTGANQRCRVAYQLDLHTKEPFLYLNKICEKE
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: stbC mutant is attenuated in pigs (Carnell et al., 2007).
COG COG3188NU, under N: Cell motility; U: Intracellular trafficking, secretion, and vesicular transport
References
Carnell et al., 2007: Carnell SC, Bowen A, Morgan E, Maskell DJ, Wallis TS, Stevens MP. Role in virulence and protective efficacy in pigs of Salmonella enterica serovar Typhimurium secreted components identified by signature-tagged mutagenesis. Microbiology (Reading, England). 2007; 153(Pt 6); 1940-1952. [PubMed: 17526851].