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pefC from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2

Victor ID 2586
Gene Name pefC from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Sequence Strain (Species/Organism) Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
NCBI Gene ID 1256222
NCBI Protein GI 17233482
Locus Tag PSLT017
Protein Accession NP_490509.1
Other Database IDs UniProtKB-ID: PEFC_SALTY
UniRef100: UniRef100_P37868
UniRef90: UniRef90_P37868
UniRef50: UniRef50_P37868
UniParc: UPI0000131575
EMBL: M37853
EMBL: L08613
EMBL: AE006471
EMBL-CDS: AAA63534.1
EMBL-CDS: AAC36960.1
EMBL-CDS: AAL23521.1
RefSeq_NT: NC_003277.1
RefSeq_NT: NC_013437.1
GenomeReviews: AE006471_GR
KEGG: stm:PSLT017
NMPDR: fig|99287.1.peg.4442
HOGENOM: HBG636671
OMA: YSANASQ
ProtClustDB: CLSK862815
BioCyc: STYP99287:PSLT017-MONOMER
Taxonomy ID 99287
Plasmid No pSLT
Gene Starting Position 10932
Gene Ending Position 13340
Gene Strand (Orientation) -
Protein Name usher protein
DNA Sequence 
>gi|17233403:10932-13340 Salmonella typhimurium LT2 plasmid pSLT, complete sequence
CTTATTCACAATAAACCTCCTGAACTTTGCCGGTATTAGGCACAATACCTTTCACTGAAAAATGGCAGAC
ACTGCCGTCCCCCCGCTCGACGCTGACCCGTGACGGCGCGCTCAGCATATTCATCAGCAGGACGCCGTTA
CCGGCAATGAACCCGGCATCCAGTCCCTGCTCCGTCTGCGCGCTGCCCCCGTTCAATATCCGTCCGTCAC
GCTCCTTCACCCGCAGGATGTAGCGCAGCACATGCTCGGCGCCAAACTCCCGGTACACGACAGCTTTTTC
CGTCGGCACCACGTTAAAGGAGGTGGTCTGCAGCTCCAGGTCATCCGGCACGTTTTCCATGTCCACGCTG
ACCCGGTTCAGGGAGTAATCCGACAGGTTCACCACGGTGTATCCCTTGCTGTTGGTGGGGGCTGAGCCGT
TAATCCTCACGCCCTTCACCCCCGGAATGCGCGCCACGCCCAGCGTGTTACCGGTTTCCTTCGTCATCAT
CAGGCCGCTGTCTGCCGTGCCCAGAATTGTGCCGCTCACGCTGCCTGACACGGTGGTGTTATCACGTCCC
TGCGACAGCATCATGTTGGTCTGGATGGCATCAAAGCCATACGAGAGGTTGCCGCTCAGGCTGCGGTCGC
CCTTATCACTCAGGTTGGTGTTCAGGCCGTAGCTCAGGCGGTCCGTCGGACTTGCCGACACCCCGCTGTT
CATCCCCATCCTGCCGCTGCTGCTGTAGCTCAGTCCGGTACTGCTGTAATGGCGAACCCCACCCAGGGTG
AACGGAATGCTAAAGGAGAGCGACGTGCTGTAGTCCGGTTTGTCCAGGTACGGGCGTTTACTGTAGCTGC
CGTTCAGGAAGACCGACACACCGTCCAGAATGGTGGTACTGAGGGAAACATCGCCTCCGATGGCCTTTCC
TTTCATCCACCAGTAGTCCTCCTGCCAGCCGGCCAGATTCAGGTTACTGTTCCCCAAGCGTTGCGAGAAG
CGCATCTCATAGCGTGATTTTGTGTTGTAGCGGGTATACCGGTCTGTACTGTAGAAGTCTGCGAACTCCA
CATACCCCTTACTCTGGTAACGGTAGGCCAGCAACTGCAGGTCCGAGCTGTCAGAGAAGCTTTTGGCATA
CTTGGCGCTGACGCTGTGCCCGCGTTTGTTGTCTCCGTTGTCGTATTTCGCCTGTGACAGGTTCATCCCG
GCGGACACGGCGCCGAAGCCGCCCAGGGCCTGCGTCACGCTCACCCCGCCGGCCTGGTATTTACCGTGCA
GGATAGAAGCGGCATTCAGCGTGGTGGAATCAAAGCCGTACCCCACGCTTCCCATCCAGAACATGCCGTT
TTCACCGTCAGCGAACGGTTTTTTCAGCTTATAGTTACTGGACTTGCGACCGACCGCCACATTGTATTCA
ACCTCCCCGGGACGCAGCAGCGTCGGCAGGGTGGTGACCGGATAGACGGTGGTGGTTTTGTGGCCGGACG
CATCCTCCACGGTCACCACCAGGTCACCGTTCCCCACGGAGCGGACATCATCCAGCTGGTACGGACCGGG
CGGCACCACTTTTGAGTACACGGCGTACCCGTTCTGGCTGATGGTGACGCGGGAGGTGGAGTTCGCCACC
CCGGTGATAAGCGGGGCATACCCGCGGGCCTCCCACGGCAGCATGTTACTGTTGGAGCGCAGTGCCGCCC
CGTAAAAGCCGAAATCAGAGAACAGGGCGCTGCGGGTCTGGGATTTACCGAGCAGCAGGTCCCCCTGCAC
TTGGCTGATGGCGGTGGACAGCGTGATATCCCGGGCGGTGAACTCACCGGAGCCGTCAGCGTACCGGGAT
GCGCTCATGTTACTGGCCAGCACCCAGCGTCCGAGGTTGACCATCAGGTCGGCATTTGCATAGGCACTGG
TGCTTTGCCCGGACGTCTGCGAGGCGTTGGCGGAGTACTTCAGGCGTGCCGCCGGCACGCCGTAGTCCCA
GCGGCTGGGGTCCGTTTTACCGACCAGGAACGACTGGGGAATACTGAACACCAAGCTCTGGGAGCCATAG
CTGAAGTCCACCCTGGTATAGGGGTTGCGGCTGAGGACATAGCACTGCCCGGCAGCATTCAGCGTGGAGG
CATATCCCTCCAGGCGGACAGGAACCCCGGCAGCTTTCAGCCACTCCGGCGACAGGCACAGGGCATTTGC
TGATTCTTCCTGTGGCGTAATGGACAAACGGGCTTTACCCACGTTTTCCTGGTTAACAATGACGTCGACA
TAATACTGTCCGGCCGGAAAATCCGAGCCGGATTTTAATACGGAGGGAATGGCGCTCATTCCCTGCAGGA
AATCCAGGTTCAGCTCTGAGTCAGTGCTGGCAAAAGATAGGTGAGAAAATAAGGCGAGACTCAGCGCCGA
CAGTTTAAATACCCGGTGATGAAATGACA
Protein Sequence 
>gi|17233482|ref|NP_490509.1| usher protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] MSFHHRVFKLSALSLALFSHLSFASTDSELNLDFLQGMSAIPSVLKSGSDFPAGQYYVDVIVNQENVGKARLSITPQEESANALCLSPEWLKAAGVPVRLEGYASTLNAAGQCYVLSRNPYTRVDFSYGSQSLVFSIPQSFLVGKTDPSRWDYGVPAARLKYSANASQTSGQSTSAYANADLMVNLGRWVLASNMSASRYADGSGEFTARDITLSTAISQVQGDLLLGKSQTRSALFSDFGFYGAALRSNSNMLPWEARGYAPLITGVANSTSRVTISQNGYAVYSKVVPPGPYQLDDVRSVGNGDLVVTVEDASGHKTTTVYPVTTLPTLLRPGEVEYNVAVGRKSSNYKLKKPFADGENGMFWMGSVGYGFDSTTLNAASILHGKYQAGGVSVTQALGGFGAVSAGMNLSQAKYDNGDNKRGHSVSAKYAKSFSDSSDLQLLAYRYQSKGYVEFADFYSTDRYTRYNTKSRYEMRFSQRLGNSNLNLAGWQEDYWWMKGKAIGGDVSLSTTILDGVSVFLNGSYSKRPYLDKPDYSTSLSFSIPFTLGGVRHYSSTGLSYSSSGRMGMNSGVSASPTDRLSYGLNTNLSDKGDRSLSGNLSYGFDAIQTNMMLSQGRDNTTVSGSVSGTILGTADSGLMMTKETGNTLGVARIPGVKGVRINGSAPTNSKGYTVVNLSDYSLNRVSVDMENVPDDLELQTTSFNVVPTEKAVVYREFGAEHVLRYILRVKERDGRILNGGSAQTEQGLDAGFIAGNGVLLMNMLSAPSRVSVERGDGSVCHFSVKGIVPNTGKVQEVYCE
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: pefC mutants are attenuated in mice (Bäumler et al., 1996).
COG COG3188NU, under N: Cell motility; U: Intracellular trafficking, secretion, and vesicular transport
References
Bäumler et al., 1996: Bäumler AJ, Tsolis RM, Bowe FA, Kusters JG, Hoffmann S, Heffron F. The pef fimbrial operon of Salmonella typhimurium mediates adhesion to murine small intestine and is necessary for fluid accumulation in the infant mouse. Infection and immunity. 1996; 64(1); 61-68. [PubMed: 8557375].