Search: for Help
About
Introduction
Statistics
Your PHIDIAS
Register or Login
Philert
Submission
Curated Data
Victors
BBP (Brucella)
Phinfo
Phinet
HazARD
Data Analysis
Phigen
Pacodom
BLAST
Help & Documents
Documents
FAQs
Links
Acknowledgements
Disclaimer
Contact Us
UMMS Logo

lcrF from Yersinia pestis CA88-4125

Victor ID 2486
Gene Name lcrF from Yersinia pestis CA88-4125
Sequence Strain (Species/Organism) Yersinia pestis CA88-4125
NCBI Gene ID 5236089
NCBI Protein GI 149192690
Locus Tag YPE_4205
Protein Accession YP_001293922.1
Other Database IDs UniProtKB-ID: A6M3S3_YERPE
UniRef100: UniRef100_P28808
UniRef90: UniRef90_A1JU91
UniRef50: UniRef50_A1JU91
UniParc: UPI000012E2B3
EMBL: CP000722
EMBL-CDS: ABR14838.1
RefSeq_NT: NC_009595.1
OMA: WICERRI
ProtClustDB: CLSK862139
Taxonomy ID 412420
Plasmid No pCD1
Gene Starting Position 40026
Gene Ending Position 40841
Gene Strand (Orientation) -
Protein Name putative thermoregulatory protein
DNA Sequence 
>gi|149192647:40026-40841 Yersinia pestis CA88-4125 plasmid pCD1, complete sequence
TTTAGCCTGTGGTTGCTATTTTAGTAAGACGGGCTTGGCTTGGAGTGCATCCGAAGCGACGTCGATAACT
TTGAGTGAAATAAGACTGACTCGAGAACCCCGCTTCCATGGCAATATCAACAATACTCATCTTACCATTA
AGAAGTAATTGGTGAGCATAGAGAATACGTCGCTCGCTTATCCAGGCGCGTGGTGAAATGCCATAAACTG
TACCAAACAGTTCTTTGAATGTGGTTAATCCCATGCCGAATTCTCGCGCAAATTTGCTTAGCTTCCACCC
TTGTAGATAATTTTCCTCCATAAATTTTTGCAACCGTTCTTCTGGGCGGTTGCCTAAATGGCGCAGAGCC
GAGAGAAATAAAGTCCCTTGCGAGCTAAAGGCAAGCAAAAGCAGTAATTCCTCAATACGCAGTTGCGTTA
ATACTGACGGAAAATCACTCCGTTCCAATATGGCACATAGATTTTGAATGGATTGTGATAATATTGGTGA
AATATTAAAAATTAACAATGGTTTGGGTGTGGAGTTGTCTCGTCCAATTTCACTAAGCAAAGAACCAAAG
CGATGCAAAAAAGTACTCAAAAAACTGCCGGGTAATGGAATCCAAAGTAATTGGCAGGGTTCTTTTGTAC
CACATCGAACAGCATAGCTGCCACGACGCAAAAACAGCATATTCCCCTCATCTAAATCATATGTCTGACC
GCTGCTCTGCCATGAAATCTGACCTTGCAAAAGAATATATAGGCCATCTTGTGAATGCTCAACAACCTTA
AATATAGGTGTGACCCATTCTAATTTAATAATCTCTAGTGATGCCA
Protein Sequence 
>gi|149192690|ref|YP_001293922.1| putative thermoregulatory protein [Yersinia pestis CA88-4125] MASLEIIKLEWVTPIFKVVEHSQDGLYILLQGQISWQSSGQTYDLDEGNMLFLRRGSYAVRCGTKEPCQLLWIPLPGSFLSTFLHRFGSLLSEIGRDNSTPKPLLIFNISPILSQSIQNLCAILERSDFPSVLTQLRIEELLLLLAFSSQGTLFLSALRHLGNRPEERLQKFMEENYLQGWKLSKFAREFGMGLTTFKELFGTVYGISPRAWISERRILYAHQLLLNGKMSIVDIAMEAGFSSQSYFTQSYRRRFGCTPSQARLTKIATTG
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: lcrF mutant is attenuated in mice (Flashner et al., 2004).
References
Flashner et al., 2004: Flashner Y, Mamroud E, Tidhar A, Ber R, Aftalion M, Gur D, Lazar S, Zvi A, Bino T, Ariel N, Velan B, Shafferman A, Cohen S. Generation of Yersinia pestis attenuated strains by signature-tagged mutagenesis in search of novel vaccine candidates. Infection and immunity. 2004; 72(2); 908-915. [PubMed: 14742535].