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VC0247

Victor ID 2447
Gene Name VC0247
Sequence Strain (Species/Organism) Vibrio cholerae O1 biovar El Tor str. N16961
NCBI Gene ID 2614565
NCBI Protein GI 15640277
Locus Tag VC0247
Genbank Accession AE003852
Protein Accession NP_229904
Other Database IDs UniProtKB-ID: Q9KVA2_VIBCH
UniRef100: UniRef100_C3LQK8
UniRef90: UniRef90_A5F3Y4
UniRef50: UniRef50_A5F3Y4
UniParc: UPI00000C2C40
EMBL: AE003852
EMBL-CDS: AAF93423.1
RefSeq_NT: NC_002505.1
GenomeReviews: AE003852_GR
KEGG: vch:VC0247
TIGR: VC_0247
HOGENOM: HBG758042
OMA: MLAKMDE
ProtClustDB: CLSK793540
Taxonomy ID 243277
Chromosome No I
Gene Starting Position 253650
Gene Ending Position 254465
Gene Strand (Orientation) +
Protein Name lipopolysaccharide/O-antigen transport protein
Protein pI 8.59
Protein Weight 28272.45
Protein Length 271
Protein Note similar to GB:X59554 PID:48389; identified by sequence similarity; putative
DNA Sequence 
>gi|15640032:253650-254465 Vibrio cholerae O1 biovar El Tor str. N16961 chromosome I, complete genome
ATTGGTATGGTCAGCTACTTCTCGTACAAAGTACTCGATAAAAAAGTCATTTTTTGGGTGTAGTATGATA
GAGCTATCTAATGTTAATTTGCACTACCCTGTGCCAGGGCATTTCTCACATTCTTTGCAAACAACAATAT
CCAGCAAAATTGGTGGTGTACTGGGTTCTAGTTCTGCAAAAGATAAAGAAATGAAGTATGTTCATGCACT
AAGAGATATTAATCTAAAGCTAGAAGATAGCAGTAGGTTGGGTATTATTGGGCATAATGGTGCTGGCAAA
ACGACTCTACTTAGGTTACTTTCTCAGGTTTATCCACCAACGTCAGGAAAGGTTACTATCGAAGGAAAGA
TTTCAGCATTGACTGACTTCACTCTTGGAATGGATCCCAATGCAACAGGTCTAAAGAATATCGAATTTAG
ATTAGTATTTATGGGATGTACATTTAAGGAAGCGCAACAAGCAGTTGAAGAAATCGTTGCTTTTTCAGAA
CTCGGCGAATTTATCAATCTACCAGTCAGAACTTATTCTACCGGTATGTTCTTACGTTTGGCTTTTGCAA
TTTCTACACATTTCACTCCGGATATATTGATTTTAGATGAAGTTATTGGGGCTGGTGATGAAACTTTCCG
TGAGAAAGCATTATCACGTTTGGAAAGTCTGATCAAGAAGTCAAGAATGGTTGTTTTGTCTTCTCATGAT
TTAAATGCTATTAAACAATATTGTGATCAGGCTATTGTAATGGAGAAAGGTGAAATTGTTTTCAATGGAA
CACCACAATCATGCATTGACTACTATTTAAACAGTGTCAAAAAATA
Protein Sequence 
>gi|15640277|ref|NP_229904.1| lipopolysaccharide/O-antigen transport protein [Vibrio cholerae O1 biovar El Tor str. N16961]
MVWSATSRTKYSIKKSFFGCSMIELSNVNLHYPVPGHFSHSLQTTISSKIGGVLGSSSAKDKEMKYVHAL
RDINLKLEDSSRLGIIGHNGAGKTTLLRLLSQVYPPTSGKVTIEGKISALTDFTLGMDPNATGLKNIEFR
LVFMGCTFKEAQQAVEEIVAFSELGEFINLPVRTYSTGMFLRLAFAISTHFTPDILILDEVIGAGDETFR
EKALSRLESLIKKSRMVVLSSHDLNAIKQYCDQAIVMEKGEIVFNGTPQSCIDYYLNSVKK
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: VC0247 mutant is attenuated in mice (Merrell et al., 2002).
COG COG1134GM, under G: Carbohydrate transport and metabolism; M: Cell wall/membrane/envelope biogenesis
References
Merrell et al., 2002: Merrell DS, Hava DL, Camilli A. Identification of novel factors involved in colonization and acid tolerance of Vibrio cholerae. Molecular microbiology. 2002; 43(6); 1471-1491. [PubMed: 11952899].