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VC0828

Victor ID 2441
Gene Name VC0828
Sequence Strain (Species/Organism) Vibrio cholerae O1 biovar El Tor str. N16961
NCBI Gene ID 2614495
NCBI Protein GI 15640845
Locus Tag VC0828
Genbank Accession AE003852
Protein Accession NP_230476
Other Database IDs UniProtKB-ID: TCPA1_VIBCH
UniRef100: UniRef100_Q60153
UniRef90: UniRef90_Q60153
UniRef50: UniRef50_P23024
UniParc: UPI0000000A8B
EMBL: X74730
EMBL: U09807
EMBL: AE003852
EMBL-CDS: CAA52745.1
EMBL-CDS: AAA85786.1
EMBL-CDS: AAF93991.1
RefSeq_NT: NC_002505.1
PDB: 3HRV
GenomeReviews: AE003852_GR
KEGG: vch:VC0828
TIGR: VC_0828
HOGENOM: HBG739727
OMA: HISALCG
ProtClustDB: CLSK793805
Taxonomy ID 243277
Chromosome No I
Gene Starting Position 890448
Gene Ending Position 891122
Gene Strand (Orientation) +
Protein Name toxin co-regulated pilin
Protein pI 9.18
Protein Weight 21393.63
Protein Length 224
Protein Note similar to GB:U09807 PID:398400 PID:497318; identified by sequence similarity; putative
DNA Sequence 
>gi|15640032:890448-891122 Vibrio cholerae O1 biovar El Tor str. N16961 chromosome I, complete genome
TATGCAATTATTAAAACAGCTTTTTAAGAAGAAGTTTGTAAAAGAAGAACACGATAAGAAAACCGGTCAA
GAGGGTATGACATTACTCGAAGTAATCATTGTTCTGGGTATTATGGGTGTGGTCTCAGCGGGTGTTGTTA
CGCTGGCTCAGCGTGCGATTGATTCGCAGAATATGACTAAGGCTGCGCAAAATCTAAACAGCGTGCAAAT
TGCAATGACACAAACTTATCGTAGTCTTGGTAATTATCCAGCTACCGCAAACGCAAATGCTGCTACACAG
CTAGCTAATGGTTTGGTCAGCCTTGGTAAGGTTTCAGCTGATGAGGCAAAGAATCCTTTCACTGGTACAG
CTATGGGGATTTTCTCATTTCCACGAAACTCTGCAGCGAATAAAGCATTCGCAATTACAGTCGGTGGCTT
GACCCAAGCACAATGTAAGACTTTGGTTACAAGCGTAGGGGATATGTTTCCATTTATCAACGTGAAAGAA
GGTGCTTTCGCTGCTGTCGCTGATCTTGGTGATTTCGAAACGAGTGTCGCAGATGCTGCTACTGGCGCTG
GCGTAATTAAGTCCATTGCACCAGGAAGTGCCAACTTAAACCTAACTAATATCACGCATGTTGAGAAGCT
TTGTACAGGAACTGCTCCATTCACAGTAGCTTTTGGTAACAGTTA
Protein Sequence 
>gi|15640845|ref|NP_230476.1| toxin co-regulated pilin [Vibrio cholerae O1 biovar El Tor str. N16961]
MQLLKQLFKKKFVKEEHDKKTGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQI
AMTQTYRSLGNYPATANANAATQLANGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGL
TQAQCKTLVTSVGDMFPFINVKEGAFAAVADLGDFETSVADAATGAGVIKSIAPGSANLNLTNITHVEKL
CTGTAPFTVAFGNS
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: VC0828 mutant is attenuated in mice (Merrell et al., 2002).
COG COG2165NU, under N: Cell motility; U: Intracellular trafficking, secretion, and vesicular transport
References
Merrell et al., 2002: Merrell DS, Hava DL, Camilli A. Identification of novel factors involved in colonization and acid tolerance of Vibrio cholerae. Molecular microbiology. 2002; 43(6); 1471-1491. [PubMed: 11952899].