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VC2052

Victor ID 2415
Gene Name VC2052
Sequence Strain (Species/Organism) Vibrio cholerae O1 biovar El Tor str. N16961
NCBI Gene ID 2613432
NCBI Protein GI 15642052
Locus Tag VC2052
Genbank Accession AE003852
Protein Accession NP_231684
Other Database IDs UniProtKB-ID: Q9KQE8_VIBCH
UniRef100: UniRef100_A5F6K4
UniRef90: UniRef90_A5F6K4
UniRef50: UniRef50_P33927
UniParc: UPI00000C31B8
EMBL: AE003852
EMBL-CDS: AAF95198.1
RefSeq_NT: NC_002505.1
GenomeReviews: AE003852_GR
KEGG: vch:VC2052
TIGR: VC_2052
HOGENOM: HBG663906
OMA: GIVCETT
ProtClustDB: CLSK874656
Taxonomy ID 243277
Chromosome No I
Gene Starting Position 2208515
Gene Ending Position 2210470
Gene Strand (Orientation) -
Protein Name cytochrome c-type biogenesis protein CcmF
Protein pI 10.05
Protein Weight 68693.62
Protein Length 651
Protein Note similar to GB:L42023 SP:P45037 PID:1006386 PID:1221212 PID:1205344; identified by sequence similarity; putative
DNA Sequence 
>gi|15640032:2208515-2210470 Vibrio cholerae O1 biovar El Tor str. N16961 chromosome I, complete genome
CTTAAGCCTCCTGATGTGCGTTTTTTCTAAAGCGGTAACGCTTGTCACTGATGGCTAAGGCACCACCGAT
GGCCATCAGCAAGCCGCCTGCCCAAATCCAGCGCACATAAGGTTTGTAATAAATACGCACAGCCCAAGAG
CGGTTATCATCCAAACGCTCACCCATCGCAATGTAAAGGTCACGCGTAATGCCACGGTCGATCGCCGCTT
CGGTCATCATTGACTTTGCGGTGCGATAGAAACGTTTCTCGGCATGCAATGTATTGACATATTGGCCTTG
GCTAGTGATTTCAAAATCAGCAATGTAGCCATCGTAGTTCGGTCCATCTTTATCACGCACACCTTGGAAG
TAAAAGTTGTACTCATTGAGTTGGAAGTTATCTCCCGGAGCCAAACGCACATCACGTTCAATGCTGTAGT
TTTGCACCATAGCAATACCAATGATGCTCACCGCTAAACCAACATGACCAAGCATCATCGCCCAGTGGCT
ACGTTGCAGTTTCTTCACCCCAACTATGAAGCGGTGACGATGAGTCGCTCGCGTGTGCAGTTCATAAGCG
TGTAACAGTAAGATCCACCACGCCATGACCCAACCAAGATAAGCCATTGGGCTAAACGTCGGAGCATTCA
GCCACATCATCAACGCTGCCAATACTAACGATGCCATCGCTGTGATGAGCATAGGTTTAAAGAGTGTGGA
GATTTGATCGCGCTTCCAGCGGATCAGTGGACCAATTCCCATAAAAAATGCAAAAGGAATCATCAACCAG
GCAAACAGCATGTTAAAGAAAGGCGCACCGATAGAGACGGAACCAAGACCCAGTTGTTTGTGCACTAAAG
GCAACAAGGTACCAATCAGTACCACCGCGAGTGCGGTCATCAGCAGCACGTTGTTTACCAACAAGCTGTT
TTCACGAGATACCAGCTCAAAATTACCACGCACTCGTACTGAAGCGCCTTTGATCGCAAATAGCAGTAGT
GAACCACCAATCACCGCAATCAAGAAGCCGAGAATGAACATACCGCGCGCCGGATCGGAGGCGAAAGCAT
GCACCGAAACCAAGATGCCTGAGCGCACTAAGAAGGTGCCCAATAGGCTCAACGAGAATGCAGAAATCGC
CAGCAGTACCGTCCACGCTTTGAACGTGCCGCGTTTTTCAGTCACCGCTAATGAGTGCATCAGCGCTGTT
CCGGCAAGCCAAGGCATGAAAGAGGCGTTTTCCACTGGATCCCAGAACCACCAACCGCCCCAGCCAAGTT
CGTAGTAAGCCCACCATGAACCCAGTACGATACCCAGCGTCAAAAAGAGCCAAGCGGCCGTTGTCCAAGG
TCGTGACCAACGTGCCCATGCCGTGTCGAGACGGCCTGTCATCAAAGAAGCAATCGCAAACGAGAAGGCC
ACGGAGAATCCCACATATCCCATGTACAACATAGGCGGGTGAATGATTAACCCGGGGTCTTGCAGCAGCG
GATTTAAATCACGGCCGTCAATCGGAAAATAAGGCAAGGTGCGTAAAAACGGGTTAGACGTTAGAATGAT
GAAGAGTAAGAACCCAACAGTAATCATCCCCATCACCGCAAGCACACGCGCTACCGATTCTTGTGGCATA
CCGCGGCTAAAACTCGCGACAGCCACAGTCCAAGCCGCTTGGATAAGCACCCAAAGCAGTAATGAACCTT
CATGCGCGCCCCATACAGCAGTGAGGCGATAGTACCAAGGCAGCTCACTATTGGAGTTACTTGCCACATA
TTGCACTGTAAAATCATTGATATAGAATGCCCACAGCAAAACCGCAAACGAGATCGACAGCAAAAAGAAC
ATACCCCATGCCAAAGGGCGAGCCGTGTTCATCAATAGTGTGTTGTTGCGTGACGCCCCAACTAATGGCA
GCACACTGAGTAATATCGCTAAGCTGAGCGATACAATCAGTGCAAAGTGGCCAATTTCAGCAATCA
Protein Sequence 
>gi|15642052|ref|NP_231684.1| cytochrome c-type biogenesis protein CcmF [Vibrio cholerae O1 biovar El Tor str. N16961]
MIAEIGHFALIVSLSLAILLSVLPLVGASRNNTLLMNTARPLAWGMFFLLSISFAVLLWAFYINDFTVQY
VASNSNSELPWYYRLTAVWGAHEGSLLLWVLIQAAWTVAVASFSRGMPQESVARVLAVMGMITVGFLLFI
ILTSNPFLRTLPYFPIDGRDLNPLLQDPGLIIHPPMLYMGYVGFSVAFSFAIASLMTGRLDTAWARWSRP
WTTAAWLFLTLGIVLGSWWAYYELGWGGWWFWDPVENASFMPWLAGTALMHSLAVTEKRGTFKAWTVLLA
ISAFSLSLLGTFLVRSGILVSVHAFASDPARGMFILGFLIAVIGGSLLLFAIKGASVRVRGNFELVSREN
SLLVNNVLLMTALAVVLIGTLLPLVHKQLGLGSVSIGAPFFNMLFAWLMIPFAFFMGIGPLIRWKRDQIS
TLFKPMLITAMASLVLAALMMWLNAPTFSPMAYLGWVMAWWILLLHAYELHTRATHRHRFIVGVKKLQRS
HWAMMLGHVGLAVSIIGIAMVQNYSIERDVRLAPGDNFQLNEYNFYFQGVRDKDGPNYDGYIADFEITSQ
GQYVNTLHAEKRFYRTAKSMMTEAAIDRGITRDLYIAMGERLDDNRSWAVRIYYKPYVRWIWAGGLLMAI
GGALAISDKRYRFRKNAHQEA
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: VC2052 mutant is attenuated in mice (Merrell et al., 2002).
COG COG1138O, under O: Posttranslational modification, protein turnover, chaperones
References
Merrell et al., 2002: Merrell DS, Hava DL, Camilli A. Identification of novel factors involved in colonization and acid tolerance of Vibrio cholerae. Molecular microbiology. 2002; 43(6); 1471-1491. [PubMed: 11952899].