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VCA0578

Victor ID 2389
Gene Name VCA0578
Sequence Strain (Species/Organism) Vibrio cholerae O1 biovar El Tor str. N16961
NCBI Gene ID 2612692
NCBI Protein GI 15601337
Locus Tag VCA0578
Genbank Accession AE003853
Protein Accession NP_232968
Other Database IDs UniProtKB-ID: Q9KM11_VIBCH
UniRef100: UniRef100_C3NX55
UniRef90: UniRef90_C3NX55
UniRef50: UniRef50_C3NX55
UniParc: UPI00000C358F
EMBL: AE003853
EMBL-CDS: AAF96480.1
RefSeq_NT: NC_002506.1
GenomeReviews: AE003853_GR
KEGG: vch:VCA0578
TIGR: VC_A0578
HOGENOM: HBG303837
OMA: CTRRHMR
ProtClustDB: CLSK869665
Taxonomy ID 243277
Chromosome No II
Gene Starting Position 517363
Gene Ending Position 519060
Gene Strand (Orientation) -
Protein Name hypothetical protein
Protein pI 6.27
Protein Weight 61066.92
Protein Length 565
DNA Sequence 
>gi|15600771:517363-519060 Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete sequence
GCTAGTGTTCTGACAAGTCTGGCTTTACCCAGACTTGGCTAAAATCGAACCAACCTAGCGCATTGCATTT
CGCATTTTGTAACGCACCGCACTGATCTTTACTGATGCCTAACCAGCAGTGGAACATCGGGATCAGTTGG
TGTTTTTCCACCAGTGATTTCCCCAGTTCTTTCGCAGGGAAGAGCGCAGAAGAGTCAGCACGCCAAGCAT
CAATCAAACTCACCCACTGATTGAAATCCTCTCCTTTGCTCAAAAACTCAATATCGGAGTAATTGAGTAA
CCACCCCGCTAACGCATCATCACGGTGATTAGCAATACCCATTGGCTTAATCCAAATATCCACATTTTCA
GTTTCAACGACCGTGTGTTCATATTTGATGACATTGACTGTGATCCCATCTTGGCTGAGCAATTGTTTAA
TCGCATTAGCAACAGTCGGAAACATAGGATGCTGAGCGTGATAGGCAATCGTAAGTTCTTTGGATTCTGG
CGGTAACGTTCTTTGCGCTGCCGCTGAGTGGTGATACCACCCGGGTTTTAACCCATAGGCTGGCAACACC
CCAAGTTCAATGATTTTCTCTTCCGGCAGAAGACGAAACAGGTTGAGCGCATTAAGTTTGTCAGTGAGAT
AGCGCGCCCAATGTTCATCTTTGGCAACGCCATTGCGACGATTAAGCAGTAAATAGGTGCAGCCGGGATC
CAGCTCTACCTCTTCCGTTGATGATCCTCGAGCAGTTTTCATCGGATTGGATAAGCTTGGAAAAACCATG
GAAGAGTGCACTTCATCAATCACCCAAACTTCAACTCGGTCCAGCAGTGGACGAAAACCAAAATAGCCAT
CAAACGCTTGCAAAACCAAACGTTTTTCATCGTTTAGAACCACTTTGTAGGGCCCCGTTCCTACTGGCAT
TAAATCAAAATCGGGATTGCGATCGGACTCCGCTGGGAGGATTTTGGCACAGGCTTCGGCAAGCAATAGC
GGTAAGCGGGTATCGGGCTTTTGCAGATGCACATCGACCGCCCAAGGGTAAGGTGAGTCAACTCGGTCAA
TATGGGCAAAAAGATTAAGCAACCGTAGCTGCCAAAGATTTTGCACAATCAGTTCGGTGGTGAGGAGATT
GCCATTATGAAAGCGCACTCCGGGGCGTAAGTAAAACCGCCAGTGAGTATCTGATAGCGCCTGCCAAGCG
TGTGCTAAATCAGGCTGTAATTGCTCTTCTTCATCAAGACGCGTAAGGCCGCTAAACACCTGTCGCGCAA
TATGCTGTTCAGAGCGGCGCATCGGCTTTTGTGGGTTCAACATCGATAGCTGACGATAGTAAGGCAACCT
GACAACTTGCAGACCTTCTTGATGCTGAACGCCAAGGTAGCTTTCTATCACTTGAGTTAATTTTGCGGCG
TCCTGATCAAGCACGGCAAACGCTTGGCCTATCTTTCCTTCATTGAGATAACGGCGCGCAAGGTTCTCAC
TGACATCCGCGCGACTGCGTTTAAAGATCAGTTGCGAGAGTTTGCCGCGCCCCGCCGCAGGATGCCACTC
AATCCACCCCTCTTCTTCCATTTTATTGAGAACAATACGCGCATTACGTCGAGTGCAAAAAAGAATATCG
GTGACATCTTCCAGTTGGGTTTCAACGTCTTGACCTTGAAAATGCTCAAAGAGTGTTTCGAACTGTACAC
GTAAACGCGGGCTGCTCA
Protein Sequence 
>gi|15601337|ref|NP_232968.1| hypothetical protein VCA0578 [Vibrio cholerae O1 biovar eltor str. N16961]
MSSPRLRVQFETLFEHFQGQDVETQLEDVTDILFCTRRNARIVLNKMEEEGWIEWHPAAGRGKLSQLIFK
RSRADVSENLARRYLNEGKIGQAFAVLDQDAAKLTQVIESYLGVQHQEGLQVVRLPYYRQLSMLNPQKPM
RRSEQHIARQVFSGLTRLDEEEQLQPDLAHAWQALSDTHWRFYLRPGVRFHNGNLLTTELIVQNLWQLRL
LNLFAHIDRVDSPYPWAVDVHLQKPDTRLPLLLAEACAKILPAESDRNPDFDLMPVGTGPYKVVLNDEKR
LVLQAFDGYFGFRPLLDRVEVWVIDEVHSSMVFPSLSNPMKTARGSSTEEVELDPGCTYLLLNRRNGVAK
DEHWARYLTDKLNALNLFRLLPEEKIIELGVLPAYGLKPGWYHHSAAAQRTLPPESKELTIAYHAQHPMF
PTVANAIKQLLSQDGITVNVIKYEHTVVETENVDIWIKPMGIANHRDDALAGWLLNYSDIEFLSKGEDFN
QWVSLIDAWRADSSALFPAKELGKSLVEKHQLIPMFHCWLGISKDQCGALQNAKCNALGWFDFSQVWVKP
DLSEH
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: VCA0578 mutant is attenuated in mice (Merrell et al., 2002).
COG COG4533R, under R: General function prediction only
References
Merrell et al., 2002: Merrell DS, Hava DL, Camilli A. Identification of novel factors involved in colonization and acid tolerance of Vibrio cholerae. Molecular microbiology. 2002; 43(6); 1471-1491. [PubMed: 11952899].