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iroC from Escherichia coli APEC O1

Victor ID 2283
Gene Name iroC from Escherichia coli APEC O1
Sequence Strain (Species/Organism) Escherichia coli APEC O1
NCBI Gene ID 5616648
NCBI Protein GI 157418224
Locus Tag APECO1_O1CoBM140
Protein Accession YP_001481296.1
Other Database IDs UniProtKB-ID: Q27T81_ECOK1
UniRef100: UniRef100_Q7WTI7
UniRef90: UniRef90_Q8GH16
UniRef50: UniRef50_Q6KD93
UniParc: UPI000019C35C
EMBL: DQ381420
EMBL-CDS: ABD51711.1
RefSeq_NT: NC_009837.1
EnsemblGenome: EBESCG00000038912.
EnsemblGenome_TRS: EBESCT00000039862
EnsemblGenome_PRO: EBESCP00000038213
GenomeReviews: DQ381420_GR
eggNOG: COG1132
HOGENOM: HBG429047
OMA: TYYIAGI
ProtClustDB: CLSK894342
BioCyc: ECOL405955:APECO1_O1COBM140-MONOMER
Taxonomy ID 405955
Plasmid No pAPEC-O1-ColBM
Gene Starting Position 118170
Gene Ending Position 121955
Gene Strand (Orientation) -
Protein Name salmochelin siderophore system, ATP-binding cassette; similar to AAP41471; identified by match to protein family HMM PF00005
DNA Sequence 
>gi|157418083:118170-121955 Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequence
ACTATCCCGGGGTTTCCTCCTTCATGTTGTGCTGGCGATGGAGCGCAGTACTGCTGACGCTGTCATGCCA
TAAGCGGGTATAGAGGCCGCCCGCAGATAACAGCTGTTCGTGGGTTCCGTATTCCGCAAGTAACCCCTTA
TCAATAACGGCAATCAGATCGCAGCGTTGCGCGGTGGTCAGACGATGTGCAACAATCAGCGCCGAGTGCT
TCCCGGCATGCACGACATCTGTTAACGATGACATCAGTCGTTCTTCGGATGTGCGATCCAGACATGACGT
GGCTTCGTCGAGCAGCAGGATGTGGGCATTCGCCAGTTGCGCGCGGGCCAGCGCAATCAACTGGCGCTGA
CCTGCGGGCAGATCGGCTCCGCCGTTATTCACCGGTGTCCGGAATCCCTGCGGCAGATTGCACACCATCT
CATACAGCCCTGCCCGCTGTGAGGCAATTTCAACGTCTTCATTGGTGGCGGATGGCCGTGAATAACGAAT
GTTTTCTGCAATATCACTACTAAACAGTGCTACATCCTGATCGACAAGCCCAATCTGGCGACGATACTCA
GTGAGCGAGGCATCATCGAGCATTTGCACACCGATTCTGATGTTGCCGTGCGTGGGGAAATACAACCCGG
CAATCAGCTTAATCAGCGTCGACTTACCCGCACCGCTGCGACCGACGACCGCGACAACCATTCCCTCTGG
GATCGTCAGGGTAAGTTTGTTCAGAGCTGGCTCGTGACTGTCGGGATAACTGAACGTGACCTCATCAAGA
TGCAGTGCACCGGTGACAGGGAGGACCGAAGAGGACCCGAGGTGCTCAGTGCCTTCTGTCGCCAGTAGTT
CATCAATATGTTTGCCGCTGGCTGTCGCCTGCTGCCAGGCGTCGACAATCCCTGATAACTGCTGCACTGG
CCCATAGAATTGCCCCAGCAACAGGAAGAAAGCCGCCAGTACCCCGGCAGTCATTTCTCCAGCGGCGACC
TGCGAAGCTCCCACTAACAGAACAGCGGCATAGGAGGCCTCGGTGCAGAATGTCAGGAACGGAAAATAGA
CTGCAAGGTATTTTTGTGCTCGCACACGGGTTGCGCGGAAACGCTCCGATAACGCGCGCAGCCGGGCGCC
CTCCAGTTCCTGCTGACCATGCGATTGCACGACACGCAGGCCAGAGACTTTTTCCTGCAGGGTGCTGTTG
ACTTTGCCTATTTCCAGCCGTGCCTGTGCATAAGCAGGGGTACTGAGGCGGCGATAAATCATGGTTGCCA
GTGCGGCCACTGGCACTGCGCTTAATGCCGTCAGCGCCAGGAACGGGTCGAGCCAGAACATGGTGGCGGC
GATTGCGAACATCGTCACCAGACTGGTGGCCGCACCGGCAAGGCCGTTTTGCAGAAAGCGGGCGAGAGAG
TCCACATCAACGGTCATGCGGGTAAGACGCGAATCGGCATGCTTTTCATGCCAGGGGAGTCCAAGACGCA
GCATATGGCCGAAGCTGCGCAAGCGCACCGAATGCTGAACTGATTCCGCCGCTCTGGCGGCGAAGACCGT
CTGCAGAGAATAACTGCACCAGCCCACAATGACTAGGCACAGGGCGAGCAGGGCACAGAGGCCGATGATC
GACATATCGCCTGTGGCGACACCGGAGTCAATGCCGTGCTGCAACAGTATCAGTACCCCTACGCCTGCCG
CAGAATCGAGTGCGATCAGCAGAGCGGCGATGACGAACATCCACGCCACAGGCTTCAGTAGTGACGTGAC
TTTGCGACCTTTACCGGCCAGCGCCTGCTGTACTGCATTTTCCGGTACGCGGGTCATACGGGCGACAAAA
CCTTTATCCCCCGTATCCGTTACATCGTCTTGTGTCGCTGGTTCAGCCGGCCACAATTCGTTGTGGCTAT
TGTGGGACGTGGCCAGAAAATCGCTGTCGCCGGTCATCAGTGCGCGGAACGCCGGACAGCGCGCTTCAAG
TTCTGCCGGGGTTCCGGTATCCACCATACGGCCCTTATCCAGCACCACAACCCGGCTGGCTAGCTGAAGT
GTTGAACGCCGTCGGGCAATCACCAGCAGCATATGCCCTTCGTCAGCATAGCGACCCAGCGCGGTATTAA
TCTCCGCTTCCGTAACAGCATCAACCGCTGAGGTGGTATCATCCAGGATTAACACGTCCGGTGCAGTAAT
GAGCGCCCGCGCCAGCGCTATTCGCTGCCTCTGCCCGCCGGAAAGATTCGTACCCCGTTCGGTTAACAGG
CTATCGAAGCCTTTCGGCAGGGCGTTGATAAAATCGCTGGCTCCTGCAGCAGCTGCCGCACGGCGAATGT
CGTCCGCCGTTGCCTGAGGGTGGCCATAGGCGATATTTTCCGCCACCGTACCGGCAAACAGAAAAGCATC
TTCAAATACGATGCCTACCCGGCGACGAAGCGCCTCCAGTCTGATATCGCGAAGATTTTGTCGGCCTTCG
CTGGTGTTGAGCCATATCTTTCCGGAGCAGGGATCATAAAAACGCGCCAGCAGCATCAACAGGGTCGATT
TTCCTGAACCCGATGCGCCCACCACCGCCACGGTTTCACCGGCGCGCAGGGAAAAGGAGATATTGCTGAG
GATATGTCTGTCGCCATGGTGGTAGTCAAAGCTCATATTCTCCAGTTCCAGTCCGACAACCTGACTGTTA
ATCGACTCCGTCCCGTCCTCCATCTGTGAACGGGTGTCGATCAGTGCAAACACCCGCTCCACGGACGCCT
GAGTGCGCTGTGCGATAACCAGAAACGATGCCAGTACGCGGGTTGGCCCGGTCAGCATCGCGAGGAAGCT
GGCGAATGCAACGAAGGTACCGAGATCGATCCGCCCGTGCATGACCGACCACCCGCCGTAGCACAGCAGG
ACGATTTGCCCGAGCACCGGTAGCGCCAGCATGGTGGCCCCAGGCATCGCCTGCGAGATAACCGCACCGA
TGCGTACACGCACAATCTGCCGCGACTGCCTATCGAGCCAGTGCGTTTCACGCATCTCTGCCACACAGGA
TTTTACCACTGAGATCTGTGCCAGCACCTCGCGTATATGTTCGGTGAGATTCGCCAGTTGGTCCGAGGCC
AGCCCGGTTTGCGCGAAGACCCTACGACGCGCACGAAGCGCGGTGATCGCCAGGCATACCAGTACGCACA
CGACGATAAGCGTCATGGCAGGGGACATCCACAGCATCACGGCAATGCCGGCAATGTAATAAGTGAACAC
TGCCAGCGGCACCGGGCACATCTGCAGCAGGGTATGCACCTGCTGCAGATCGCTGTTGGTCCGTGAAATC
ACCTGCCCGGTGCGCAGCGCATCCTGGCCTGCGCCGTCAAGTTTCTGAATACTGTCGAATACCCGTCCTC
TGAGGGTATGCTGCACCCAGAGTGAGAGCATCCCGGCATAACCACGGCGCACATAGTTACCGATGAAATC
AAAAAAAGCGATCAACAGTAACCCGCAGGCCAGCCACGGCAGGCGGGCCGGATTGCCCGCCAGTGCGTCA
TTCACAGCCTGTCTTGTCAGCAGTGGCGTCAGCGCAGCCAGCAAAATAGTCGATACTGACGCTACCACCA
CGATGACACTAAGTTTCTTACGTTCCCAGCACACGCGCGCTAGGCGAACTATCCATGACTGAGCCGGTGT
GGGAGTGTGATTCGCAGGCATTAAGCCTCCTCCGTCTGTAAAATACGATCCACTGGCCGGATCGTTCCGC
AAAAAAGCCAGCACGCTCCGGTCCCGCATTGTTATGGATGCATGACTCCTGGATGGGTGCTGGCATATGA
TTATCA
Protein Sequence 
>gi|157418224|ref|YP_001481296.1| IroC [Escherichia coli APEC O1] MIIICQHPSRSHASITMRDRSVLAFLRNDPASGSYFTDGGGLMPANHTPTPAQSWIVRLARVCWERKKLSVIVVVASVSTILLAALTPLLTRQAVNDALAGNPARLPWLACGLLLIAFFDFIGNYVRRGYAGMLSLWVQHTLRGRVFDSIQKLDGAGQDALRTGQVISRTNSDLQQVHTLLQMCPVPLAVFTYYIAGIAVMLWMSPAMTLIVVCVLVCLAITALRARRRVFAQTGLASDQLANLTEHIREVLAQISVVKSCVAEMRETHWLDRQSRQIVRVRIGAVISQAMPGATMLALPVLGQIVLLCYGGWSVMHGRIDLGTFVAFASFLAMLTGPTRVLASFLVIAQRTQASVERVFALIDTRSQMEDGTESINSQVVGLELENMSFDYHHGDRHILSNISFSLRAGETVAVVGASGSGKSTLLMLLARFYDPCSGKIWLNTSEGRQNLRDIRLEALRRRVGIVFEDAFLFAGTVAENIAYGHPQATADDIRRAAAAAGASDFINALPKGFDSLLTERGTNLSGGQRQRIALARALITAPDVLILDDTTSAVDAVTEAEINTALGRYADEGHMLLVIARRRSTLQLASRVVVLDKGRMVDTGTPAELEARCPAFRALMTGDSDFLATSHNSHNELWPAEPATQDDVTDTGDKGFVARMTRVPENAVQQALAGKGRKVTSLLKPVAWMFVIAALLIALDSAAGVGVLILLQHGIDSGVATGDMSIIGLCALLALCLVIVGWCSYSLQTVFAARAAESVQHSVRLRSFGHMLRLGLPWHEKHADSRLTRMTVDVDSLARFLQNGLAGAATSLVTMFAIAATMFWLDPFLALTALSAVPVAALATMIYRRLSTPAYAQARLEIGKVNSTLQEKVSGLRVVQSHGQQELEGARLRALSERFRATRVRAQKYLAVYFPFLTFCTEASYAAVLLVGASQVAAGEMTAGVLAAFFLLLGQFYGPVQQLSGIVDAWQQATASGKHIDELLATEGTEHLGSSSVLPVTGALHLDEVTFSYPDSHEPALNKLTLTIPEGMVVAVVGRSGAGKSTLIKLIAGLYFPTHGNIRIGVQMLDDASLTEYRRQIGLVDQDVALFSSDIAENIRYSRPSATNEDVEIASQRAGLYEMVCNLPQGFRTPVNNGGADLPAGQRQLIALARAQLANAHILLLDEATSCLDRTSEERLMSSLTDVVHAGKHSALIVAHRLTTAQRCDLIAVIDKGLLAEYGTHEQLLSAGGLYTRLWHDSVSSTALHRQHNMKEETPG
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: attenuated in chicks (Caza et al., 2008).
COG COG1132V, under V: Defense mechanisms
References
Caza et al., 2008: Caza M, Lépine F, Milot S, Dozois CM. Specific roles of the iroBCDEN genes in virulence of an avian pathogenic Escherichia coli O78 strain and in production of salmochelins. Infection and immunity. 2008; 76(8); 3539-3549. [PubMed: 18541653].