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rdgC

Victor ID 2134
Gene Name rdgC
Sequence Strain (Species/Organism) Escherichia coli O157:H7 str. EDL933
NCBI Gene ID 957342
NCBI Protein GI 15800120
Locus Tag Z0492
Genbank Accession AE005174
Protein Accession NP_286132
Other Database IDs UniProtKB-ID: RDGC_ECO57
UniRef100: UniRef100_B5Z2U5
UniRef90: UniRef90_B5Y109
UniRef50: UniRef50_B5EWS4
UniParc: UPI000013348C
EMBL: AE005174
EMBL: BA000007
EMBL-CDS: AAG54740.1
EMBL-CDS: BAB33867.1
RefSeq_NT: NC_002655.2
RefSeq_NT: NC_002695.1
EnsemblGenome: EBESCG00000023745
EnsemblGenome_TRS: EBESCT00000024691
EnsemblGenome_PRO: EBESCP00000023584
EnsemblGenome: EBESCG00000055764
EnsemblGenome_TRS: EBESCT00000056716
EnsemblGenome_PRO: EBESCP00000054544
GenomeReviews: AE005174_GR
GenomeReviews
Taxonomy ID 155864
Gene Starting Position 471195
Gene Ending Position 472106
Gene Strand (Orientation) -
Protein Name recombination associated protein
Protein pI 5.16
Protein Weight 32446.13
Protein Length 303
Protein Note Required for efficient pilin antigenic variation
DNA Sequence 
>gi|16445223:471195-472106 Escherichia coli O157:H7 str. EDL933 chromosome, complete genome
ATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCAT
CAGGATGAAATCGGCATCAAAACGCTGGGCGAAATCTTCACGGTCGATATCTTCGTTTTGATCGCGCAGC
TCGTCGCAGAACTTCAGACGCTTGAGCGAACCATCGTCGCACATCACAAACTGAATGCGCTGCTGCCAGT
CGAGCGCCAGTTTAGTCACCACTTTTCCGGCTTCAATGTGATTGGTGATCTCTTCGCTGGTCAGATCTTG
TTTCTTCGCGCGGATCACTCCGCCATCTTCCAGCAACGATTTCAGCTCGGCTTCATCAAGCAGCTGGAAG
CCCTGTGCCGCACTACCGGAACGTACCCATTCGGTCAGCGTCAGTTCAATCGGGTTTGCCATGCTCAATG
GTACAACCGGTAACGACCCCAGGCTTTTACGCAGCAGTGCCAGCGTATCTTCCGCTTTTTTGGCACTGGC
GCAGTCCACCATAATCAAACCGTTAACCGTGTCGATCCACATCATTGTCTGGCTAAAACGGCTGAAAGCA
CGCGGCAACAGAGAGTGCAGCACTTCGTCTTTCAGCGAATCTTTTTCGGTTTTCTTCAGCTTACGCGCCT
GTTCCGCTTCCAGTTTGGCGATTTTCGCTTCCAGCGCCTGTTTAATCACCGGAGACGGTAGGATTTTTTC
TTCTTTGCGCGCGCAGATAACAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATC
GGAGGAACCCAGCCCATCTTCGCCATGTCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTT
TTTCCATCTCTTCTGCACGCAGCGAAATCTCGCGGCTAAGACGGTAAACCATTAAATTTTTGAACCACAG
CA
Protein Sequence 
>gi|15800120|ref|NP_286132.1| recombination associated protein [Escherichia coli O157:H7 str. EDL933]
MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMGSHSDALTHVANGQIVICARK
EEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVD
CASAKKAEDTLALLRKSLGSLPVVPLSMANPIELTLTEWVRSGSAAQGFQLLDEAELKSLLEDGGVIRAK
KQDLTSEEITNHIEAGKVVTKLALDWQQRIQFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFI
LMTGELAALIQNLIEGLGGEAQR
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: rdgC mutant is attenuated in calves (Dziva et al., 2004).
COG COG2974L, under L: Replication, recombination and repair
References
Dziva et al., 2004: Dziva F, van Diemen PM, Stevens MP, Smith AJ, Wallis TS. Identification of Escherichia coli O157 : H7 genes influencing colonization of the bovine gastrointestinal tract using signature-tagged mutagenesis. Microbiology (Reading, England). 2004; 150(Pt 11); 3631-3645. [PubMed: 15528651].