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ychF

Victor ID 2047
Gene Name ychF
Sequence Strain (Species/Organism) Escherichia coli
NCBI Gene ID 4492443
NCBI Protein GI 117623421
Locus Tag APECO1_319
Protein Accession YP_852334.1
Other Database IDs UniProtKB-ID: A1AAD0_ECOK1
UniRef100: UniRef100_E2QKY3
UniRef90: UniRef90_E2QKY3
UniRef50: UniRef50_E2QKY3
UniParc: UPI00000DEAF0
EMBL: CP000468
EMBL-CDS: ABJ00620.1
RefSeq_NT: NC_008563.1
EnsemblGenome: EBESCG00000036980.
EnsemblGenome_TRS: EBESCT00000037930
EnsemblGenome_PRO: EBESCP00000036447
GenomeReviews: CP000468_GR
KEGG: ecv:APECO1_319
eggNOG: COG0012
HOGENOM: HBG586249
OMA: TELMLAD
ProtClustDB: PRK09601
BioCyc: ECOL405955:APECO1_319-MONOMER
Taxonomy ID 405955
Gene Starting Position 1270445
Gene Ending Position 1271536
Gene Strand (Orientation) -
Protein Name translation-associated GTPase
DNA Sequence 
>gi|117622295:1270445-1271536 Escherichia coli APEC O1, complete genome
ATTAGACGTTGAACAGGAAGTTCATCACATCGCCATCTTTAACGATGTAATCTTTGCCTTCTGCACGCAT
TTTGCCTGCTTCTTTCGCGCCTTGTTCACCTTTGTAAGTGATGAAATCTTCAAACGAGATGGTTTGTGCA
CGGATAAAGCCTTTTTCAAAATCAGTATGGATTTTGCCCGCTGCCTGCGGCGCGGTTGCACCAACCGGAA
TGGTCCATGCACGCACTTCTTTCACCCCAGCGGTGAAGTAAGTTTGCAGGTTCAGCAGCTTATAACCGGC
ACGGATCACACGGTTCAGGCCCGGCTCTTCCAGCCCAAGCTCCTGCATAAACTCGTCACGCTCTTCGTCG
TCCAGTTCGGCAATGTCTGCTTCAACAGCAGCACAAACCGGAACTACAACAGAACCTTCTTTCGCTGCGA
TTTCACGCACCTGGTCAAGATACGGGTTGTTTTCAAAACCGTCTTCGTTGACGTTGGCGATGTACATTGT
TGGTTTTAGCGTCAGGAAGCTCAGGTAACGAACAGCCGCTTTCTCTTCAGCGCTTAAATCCAGCGCACGC
AGCATACCTGCGTTTTCCAGCTGGGGCAGGCATTTTTCCAGTACCGCCAGCTCGGCTTTCGCGTCTTTAT
CGCCACCTTTGGCTTTCTTCTGTACGCGATGAATCGCACGTTCACAGGTGTCGAGATCCGCCAGCGCCAG
TTCGGTGTTGATAACTTCAATATCATCCGCCGGGTTAACTTTGCCGGAAACGTGAATGATGTTGTCATTT
TCAAAGCAGCGAACAACGTGACCGATCGCTTCGGTTTCACGGATGTTGGTCAGGAACTGGTTACCCAGAC
CTTCGCCTTTCGATGCGCCTTTTACCAGACCGGCGATATCGACAAATTCCATGGTCGTGGGAAGTGTACG
CTGCGGTTTCACGATTTCAGCCAGTTGATCCAGGCGAGGGTCAGGCATTGGTACGACGCCAGTGTTCGGC
TCGATGGTGCAGAATGGAAAGTTGGCCGCTTCAATACCGGCTTTGGTCAGCGCGTTGAACAGGGTAGATT
TCCCGACGTTGGGCAAACCGACGATACCGCATTTGAATCCCA
Protein Sequence 
>gi|117623421|ref|YP_852334.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli APEC O1] MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRALDLSAEEKAAVRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAVEADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFLFNV
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: ychF mutant is attenuated in chickens (Li et al., 2005).
COG COG0012J, under J: Translation, ribosomal structure and biogenesis
References
Li et al., 2005: Li G, Laturnus C, Ewers C, Wieler LH. Identification of genes required for avian Escherichia coli septicemia by signature-tagged mutagenesis. Infection and immunity. 2005; 73(5); 2818-2827. [PubMed: 15845486].