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bipD

Victor ID 1984
Gene Name bipD
Sequence Strain (Species/Organism) Burkholderia pseudomallei K96243
NCBI Gene ID 3096115
NCBI Protein GI 53722550
Locus Tag BPSS1529
Genbank Accession BX571966
Protein Accession YP_111535
Other Database IDs UniProtKB-ID: BIPD_BURPS
UniRef100: UniRef100_A3MCH1
UniRef90: UniRef90_A3MCH1
UniRef50: UniRef50_A3P6Z4
UniParc: UPI000043BD1B
EMBL: EF120623
EMBL: BX571966
EMBL-CDS: ABL67521.1
EMBL-CDS: CAH39002.1
RefSeq_NT: NC_006351.1
PDB: 2IXR
PDB: 2IZP
PDB: 2J9T
PDB: 3NFT
GenomeReviews: BX571966_GR
KEGG: bps:BPSS1529
HOGENOM: HBG375319
OMA: ERWETEH
ProtClustDB: CLSK708801
BioCyc: BPSE272560:BPSS1529-MONOMER
Taxonomy ID 272560
Chromosome No 2
Gene Starting Position 2082840
Gene Ending Position 2083772
Gene Strand (Orientation) -
Protein Name membrane antigen
Protein pI 4.96
Protein Weight 31792.43
Protein Length 310
Protein Note Similar over the C-terminal region to Shigella flexneri 36 kDa membrane antigen IpaD or cp0126 SWALL:AAK18444 (EMBL: J04117) (332 aa) fasta scores: E(): 2e-09, 36.81% id in 182 aa, and to Shigella dysenteriae 37 kDa membrane antigen IpaD SWALL:IPAD_SHIDY (SWALL:Q03947) (332 aa) fasta scores: E(): 8.7e-09, 36.36% id in 187 aa
DNA Sequence 
>gi|53721039:2082840-2083772 Burkholderia pseudomallei K96243 chromosome 2, complete sequence
TTCAGATCTGCAGATAGCTCTTGGCGGTGTCCGTGAGCGTCGAGATCGCGCCGCTCAGCACCTTGACCAG
ATTGTCGAAGTTCGAGTTCTGGTGCGAGTATTTTTCGACGAGCGTCTGCACGTCGTTCTGGATGTTGTCC
TTCTGGCCGGAGAACGCGGTGTTCCAGGCCTGGTAGCGCGCGGTGTCCCACACCGTGCCGTCAGGGGGCA
GCGAATCGCGCATCTTGATCAGCTTGTCCGGATTGATCGTCACGACGCCCGAATCGCTGATCGAGACGGC
ATCGCCGAGCTCCTTGCGCCAGCGCGCGATGTCGGCCCCCTTCGGCAACTGCATCGTCGGCAGATGGTCG
ATGACCTGCTGGATCAACGCCTTGATCTTGCCGCCGTCGATCTTCATGTTCTTGTCGTCTTTGGCCGAGA
TGTAGTCCTGCAGCTTGCTCATCACGTCGGCGACGCTCTGGAAGTACTTCGTCAGCCCCTCGACGATCGT
TGCGTACGCATCGATATCGGATTTGCCCTGGCCGATCACGTCGACGAGCCCCTGAAGGATCGGGTCCGGC
TGGATGCCGCCTTCGTCGCCCGCGGTGTCCAGCGTGCCGCCCAGGAGCTCGGTTTCCAGGCGCTCGAGCA
GGTTGCGCTGCGCGCGCGCGTGGCCGCGCACCGCCACGCGTGCATCGTCGAACACCGTGAGGTTCGCGCG
GCGGCCATCGACGAAGCGCCCGTCGATCCGATCGGGCAGCCGGAGCGACGCGAATTCGTCGATCGCCGCG
CCGAGCTTTTGCTCCGGCACGCGGCGATCGACGCCCGCTGCGCGCAGATCGTCGTCGGTCATCGCCCGCG
CGCCGGCATCGGCCGGCATCGTCTTCGCGAGCGCCTCGAGCGCCGGCCAATCGCGCACGGTCAGCGCGCG
TCCCATGTCGACATGCATGTTCA
Protein Sequence 
>gi|53722550|ref|YP_111535.1| membrane antigen [Burkholderia pseudomallei K96243]
MNMHVDMGRALTVRDWPALEALAKTMPADAGARAMTDDDLRAAGVDRRVPEQKLGAAIDEFASLRLPDRI
DGRFVDGRRANLTVFDDARVAVRGHARAQRNLLERLETELLGGTLDTAGDEGGIQPDPILQGLVDVIGQG
KSDIDAYATIVEGLTKYFQSVADVMSKLQDYISAKDDKNMKIDGGKIKALIQQVIDHLPTMQLPKGADIA
RWRKELGDAVSISDSGVVTINPDKLIKMRDSLPPDGTVWDTARYQAWNTAFSGQKDNIQNDVQTLVEKYS
HQNSNFDNLVKVLSGAISTLTDTAKSYLQI
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: bipD mutant was attenuated in mice (Pilatz et al., 2006).
References
Pilatz et al., 2006: Pilatz S, Breitbach K, Hein N, Fehlhaber B, Schulze J, Brenneke B, Eberl L, Steinmetz I. Identification of Burkholderia pseudomallei genes required for the intracellular life cycle and in vivo virulence. Infection and immunity. 2006; 74(6); 3576-3586. [PubMed: 16714590].