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BPSS2074

Victor ID 1983
Gene Name BPSS2074
Sequence Strain (Species/Organism) Burkholderia pseudomallei K96243
NCBI Gene ID 3095712
NCBI Protein GI 53723092
Locus Tag BPSS2074
Genbank Accession BX571966
Protein Accession YP_112077
Other Database IDs UniProtKB-ID: Q63IJ5_BURPS
UniRef100: UniRef100_B7CQ44
UniRef90: UniRef90_C4I9Y3
UniRef50: UniRef50_C4I9Y3
UniParc: UPI000043BF34
EMBL: BX571966
EMBL-CDS: CAH39554.1
RefSeq_NT: NC_006351.1
GenomeReviews: BX571966_GR
KEGG: bps:BPSS2074
NMPDR: fig|272560.3.peg.2221
HOGENOM: HBG607790
OMA: PDGSAMD
ProtClustDB: CLSK711221
BioCyc: BPSE272560:BPSS2074-MONOMER
Taxonomy ID 272560
Chromosome No 2
Gene Starting Position 2809321
Gene Ending Position 2810211
Gene Strand (Orientation) +
Protein Name senescence marker protein-30 (SMP-30) family protein
Protein pI 4.85
Protein Weight 30078.3
Protein Length 296
Protein Note Similar to Oryctolagus cuniculus senescence marker protein-30 RGM or SMP30 SWALL:SM30_RABIT (SWALL:Q9TTJ6) (299 aa) fasta scores: E(): 2.7e-21, 29.73% id in 296 aa, and to Rhizobium loti regucalcin homolog mlr7379 SWALL:Q986F6 (EMBL: AP003011) (301 aa) fasta scores: E(): 1.7e-37, 40.83% id in 289 aa
DNA Sequence 
>gi|53721039:2809321-2810211 Burkholderia pseudomallei K96243 chromosome 2, complete sequence
CATGGAACATGAATTCAAGTGGGTCTGCGCCGTGCCCCTCGCTAGTGGATGCGGAGAAGGCGCTGTGTGG
GCCGAGGCGGAACAGGCGTTGTACTGGACAGACGTGACGCGTTTTCTGCTGCTGCGGCTGACGCCGCGGG
ACGGTTGCGTCAAGACATGGCTCTTCGATGAGCCCGTGGTAGCCCTGTCGCTGACAGATCGAGTCGGGCG
CTTGCTCGTGGCCCTCGGATCGCATCTGATTCTGTGGACTGCCGCCACGGACGAGCGCGTGAACTATGGC
GTCTGGCTCGACGGCTGGCCACAAGTCCGGTTTAATGAAGGGCGTAGCGGACCGGACGGCAGCTTCTGGG
TGGGATCGATGCGCAACAACGTCAATACCGATGGCAGCCTGCGAGAGGCGGGCGGTAGCGATGGCATATT
GATGCGTGTCGGACCTGGCACCCAGACGTCTATTCAGGGGAGCGGATTGGGAATCGCCAATACGTTGTGT
TGGACACCAGACCATAGCCGGCTCATTTTTGGCGACACCTTGGCGAACATGCTCTACATCGCCGACTATC
GGGATGGAGTTCTTTCAAACCGGCATCCTTTCTTCACGGGATTCGAACGTGGTTTGCCAGATGGCTCTGC
CATCGACGCAGAAGGCTTCGTCTGGAACTGTCGGTTCGGCGGAGGCTGTATCGTACGGATTTCTCCAGAA
GGCAAAATGGATCGGGTAATCGAAGCTCCGACGAGCAATCCGACAACCTGCGCCTTCGGCGGACCGGACT
ACCGGACGCTCTACGTCACATCCGCCAGCATCCATACTGAGCCCGGTGATCGATTGGCTGGTGGCGTCTT
TGCGCTGCGGACCGAGGTTCCCGGGCTCCCGAGCTTTGCATTTCAGTATTG
Protein Sequence 
>gi|53723092|ref|YP_112077.1| senescence marker protein-30 (SMP-30) family protein [Burkholderia pseudomallei K96243]
MEHEFKWVCAVPLASGCGEGAVWAEAEQALYWTDVTRFLLLRLTPRDGCVKTWLFDEPVVALSLTDRVGR
LLVALGSHLILWTAATDERVNYGVWLDGWPQVRFNEGRSGPDGSFWVGSMRNNVNTDGSLREAGGSDGIL
MRVGPGTQTSIQGSGLGIANTLCWTPDHSRLIFGDTLANMLYIADYRDGVLSNRHPFFTGFERGLPDGSA
IDAEGFVWNCRFGGGCIVRISPEGKMDRVIEAPTSNPTTCAFGGPDYRTLYVTSASIHTEPGDRLAGGVF
ALRTEVPGLPSFAFQY
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: BPSS2074 (lpfA) mutant is attenuated in hamsters (Boddey et al., 2007).
COG COG3386G, under G: Carbohydrate transport and metabolism
References
Boddey et al., 2007: Boddey JA, Day CJ, Flegg CP, Ulrich RL, Stephens SR, Beacham IR, Morrison NA, Peak IR. The bacterial gene lfpA influences the potent induction of calcitonin receptor and osteoclast-related genes in Burkholderia pseudomallei-induced TRAP-positive multinucleated giant cells. Cellular microbiology. 2007; 9(2); 514-531. [PubMed: 16987331].