Search: for Help
About
Introduction
Statistics
Your PHIDIAS
Register or Login
Philert
Submission
Curated Data
Victors
BBP (Brucella)
Phinfo
Phinet
HazARD
Data Analysis
Phigen
Pacodom
BLAST
Help & Documents
Documents
FAQs
Links
Acknowledgements
Disclaimer
Contact Us
UMMS Logo

lcrF from Yersinia pestis Angola

Victor ID 1929
Gene Name lcrF from Yersinia pestis Angola
Sequence Strain (Species/Organism) Yersinia pestis Angola
NCBI Gene ID 5798258
NCBI Protein GI 162417806
Locus Tag YpAngola_B0050
Protein Accession YP_001604481.1
Other Database IDs UniProtKB-ID: A9R9J2_YERPG
UniRef100: UniRef100_P28808
UniRef90: UniRef90_A1JU91
UniRef50: UniRef50_A1JU91
UniParc: UPI000012E2B3
EMBL: CP000902
EMBL-CDS: ABX88773.1
RefSeq_NT: NC_010157.1
GenomeReviews: CP000902_GR
KEGG: ypg:YpAngola_B0050
HOGENOM: HBG299043
OMA: WICERRI
ProtClustDB: CLSK862139
BioCyc: YPES349746:YPANGOLA_B0050-MONOMER
Taxonomy ID 349746
Plasmid No new_pCD
Gene Starting Position 33750
Gene Ending Position 34565
Gene Strand (Orientation) +
Protein Name thermoregulatory protein LcrF
DNA Sequence 
>gi|162417732:33750-34565 Yersinia pestis Angola plasmid new_pCD, complete sequence
TATGGCATCACTAGAGATTATTAAATTAGAATGGGTCACACCTATATTTAAGGTTGTTGAGCATTCACAA
GATGGCCTATATATTCTTTTGCAAGGTCAGATTTCATGGCAGAGCAGCGGTCAGACATATGATTTAGATG
AGGGGAATATGCTGTTTTTGCGTCGTGGCAGCTATGCTGTTCGATGTGGTACAAAAGAACCCTGCCAATT
ACTTTGGATTCCATTACCCGGCAGTTTTTTGAGTACTTTTTTGCATCGCTTTGGTTCTTTGCTTAGTGAA
ATTGGACGAGACAACTCCACACCCAAACCATTGTTAATTTTTAATATTTCACCAATATTATCACAATCCA
TTCAAAATCTATGTGCCATATTGGAACGGAGTGATTTTCCGTCAGTATTAACGCAACTGCGTATTGAGGA
ATTACTGCTTTTGCTTGCCTTTAGCTCGCAAGGGACTTTATTTCTCTCGGCTCTGCGCCATTTAGGCAAC
CGCCCAGAAGAACGGTTGCAAAAATTTATGGAGGAAAATTATCTACAAGGGTGGAAGCTAAGCAAATTTG
CGCGAGAATTCGGCATGGGATTAACCACATTCAAAGAACTGTTTGGTACAGTTTATGGCATTTCACCACG
CGCCTGGATAAGCGAGCGACGTATTCTCTATGCTCACCAATTACTTCTTAATGGTAAGATGAGTATTGTT
GATATTGCCATGGAAGCGGGGTTCTCGAGTCAGTCTTATTTCACTCAAAGTTATCGACGTCGCTTCGGAT
GCACTCCAAGCCAAGCCCGTCTTACTAAAATAGCAACCACAGGCTA
Protein Sequence 
>gi|162417806|ref|YP_001604481.1| thermoregulatory protein LcrF [Yersinia pestis Angola] MASLEIIKLEWVTPIFKVVEHSQDGLYILLQGQISWQSSGQTYDLDEGNMLFLRRGSYAVRCGTKEPCQLLWIPLPGSFLSTFLHRFGSLLSEIGRDNSTPKPLLIFNISPILSQSIQNLCAILERSDFPSVLTQLRIEELLLLLAFSSQGTLFLSALRHLGNRPEERLQKFMEENYLQGWKLSKFAREFGMGLTTFKELFGTVYGISPRAWISERRILYAHQLLLNGKMSIVDIAMEAGFSSQSYFTQSYRRRFGCTPSQARLTKIATTG
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: lcrF mutant is attenuated in mice (Flashner et al., 2004).
COG COG2207K, under K: Transcription
References
Flashner et al., 2004: Flashner Y, Mamroud E, Tidhar A, Ber R, Aftalion M, Gur D, Lazar S, Zvi A, Bino T, Ariel N, Velan B, Shafferman A, Cohen S. Generation of Yersinia pestis attenuated strains by signature-tagged mutagenesis in search of novel vaccine candidates. Infection and immunity. 2004; 72(2); 908-915. [PubMed: 14742535].