Search: for Help
About
Introduction
Statistics
Your PHIDIAS
Register or Login
Philert
Submission
Curated Data
Victors
BBP (Brucella)
Phinfo
Phinet
HazARD
Data Analysis
Phigen
Pacodom
BLAST
Help & Documents
Documents
FAQs
Links
Acknowledgements
Disclaimer
Contact Us
UMMS Logo

pCPF5603_44

Victor ID 1908
Gene Name pCPF5603_44
Sequence Strain (Species/Organism) Clostridium perfringens
NCBI Gene ID 3897013
NCBI Protein GI 86559647
Locus Tag pCPF5603_44
Genbank Accession AB236337
Protein Accession YP_473467
Other Database IDs UniProtKB-ID: Q5MQ79_CLOPE
UniRef100: UniRef100_B1BUN0
UniRef90: UniRef90_B1BFB2
UniRef50: UniRef50_Q93MD0
UniParc: UPI000049F715
EMBL: AY609161
EMBL: AY609162
EMBL: AY609165
EMBL: AY609177
EMBL: AY730635
EMBL: AY737555
EMBL: AB236337
EMBL: AB236338
EMBL-CDS: AAU14847.1
EMBL-CDS: AAU14848.1
EMBL-CDS: AAU14850.1
EMBL-CDS: AAU14861.1
EMBL-CDS: AAW66355.1
EMBL-CDS: AAW79185.1
EMBL-CDS: BAE79094.1
EMBL-CDS: BAE79137.1
RefSeq_NT: NC_007773.1
ProtClustDB: CLSK507251
Taxonomy ID 1502
Plasmid No pCPF5603
Gene Starting Position 40249
Gene Ending Position 41046
Gene Strand (Orientation) -
Protein Name beta-2 toxin
Protein pI 8.71
Protein Weight 28877.61
Protein Length 265
Protein Note PCPE56-40
DNA Sequence 
>gi|86559604:40249-41046 Clostridium perfringens plasmid pCPF5603, complete sequence
TTTAATAACAATAACCCTCACCAAATACTTTAATCGATGCTGGAGTATAATTTTCTACTTTAATTCTATA
ATTTTTGAAAGTTTCTCCTGAACCTAGATATAATTTTATCTGTCTAGCATAATCCGGATTTTCACCATAT
ACCCATTGAGAAGCTCTAATGTCATCCCCCCACATCCAATGGTCTACTACACTGTATTTTACCTTTAAGG
ATCTTGATCCAGAAGTTGCATATTGTCTAAAGTTTAATGTAATCGTATTAGAACTATATTGAAATTTACT
AGAACGTGTAAAACTAACAGCGTCTCCAATATATTGACTTAATTCGTCATCCCATGTACAAACTTGAGTT
CTGAAACTTGGTGTAGGAATATATTTACCTTCATTTACTATTGATATTCTATTCATATTACTTACCATTA
ATTTATTATCAATATATGATACTGTAAATTCCATATTGTATATAGCACCATTTAAAAACTCTGTTTTCAC
AGAAAAAATTTCGCCATTATCAATTTTTCTTGAACCTGTTATTTCATATGATTTAAGTTTTTGGTTAGGA
TCATATTTAAATTCCATTAACATGTTTTTATATTCTTCTTTAGTAACAGCTCTACTATCTTTAGAAATAT
CTACTATCGTATCAATATCATAATTTTTAAAAGCTTCTAAATACTGTACCATTACAGATTGGTATTTATT
CACTTCATTTGCTTTAACTGTATTAGGTAACTGTATTCCTAAACATAATAAGCAAGAAAATAAAAGCATC
ATTGTACTTTTTACTATTAATTTTTTCA
Protein Sequence 
>gi|86559647|ref|YP_473467.1| beta-2 toxin [Clostridium perfringens]
MKKLIVKSTMMLLFSCLLCLGIQLPNTVKANEVNKYQSVMVQYLEAFKNYDIDTIVDISKDSRAVTKEEY
KNMLMEFKYDPNQKLKSYEITGSRKIDNGEIFSVKTEFLNGAIYNMEFTVSYIDNKLMVSNMNRISIVNE
GKYIPTPSFRTQVCTWDDELSQYIGDAVSFTRSSKFQYSSNTITLNFRQYATSGSRSLKVKYSVVDHWMW
GDDIRASQWVYGENPDYARQIKLYLGSGETFKNYRIKVENYTPASIKVFGEGYCY
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: beta toxin null mutants are attenuated in rabbit ileal loop model of disease (Sayeed et al., 2008).
References
Sayeed et al., 2008: Sayeed S, Uzal FA, Fisher DJ, Saputo J, Vidal JE, Chen Y, Gupta P, Rood JI, McClane BA. Beta toxin is essential for the intestinal virulence of Clostridium perfringens type C disease isolate CN3685 in a rabbit ileal loop model. Molecular microbiology. 2008; 67(1); 15-30. [PubMed: 18078439].