Search: for Help
About
Introduction
Statistics
Your PHIDIAS
Register or Login
Philert
Submission
Curated Data
Victors
BBP (Brucella)
Phinfo
Phinet
HazARD
Data Analysis
Phigen
Pacodom
BLAST
Help & Documents
Documents
FAQs
Links
Acknowledgements
Disclaimer
Contact Us
UMMS Logo

ompC from Shigella flexneri 5 str. 8401

Victor ID 1812
Gene Name ompC from Shigella flexneri 5 str. 8401
Sequence Strain (Species/Organism) Shigella flexneri 5 str. 8401
NCBI Gene ID 4210775
NCBI Protein GI 110806189
Locus Tag SFV_2290
Protein Accession YP_689709.1
Other Database IDs UniProtKB-ID: Q0T2R1_SHIF8
UniRef100: UniRef100_Q0T2R1
UniRef90: UniRef90_Q8CVW1
UniRef50: UniRef50_Q56828
UniParc: UPI000000E3D2
EMBL: CP000266
EMBL-CDS: ABF04404.1
RefSeq_NT: NC_008258.1
EnsemblGenome: EBESCG00000095950.
EnsemblGenome_TRS: EBESCT00000096906
EnsemblGenome_PRO: EBESCP00000093102
GenomeReviews: CP000266_GR
KEGG: sfv:SFV_2290
eggNOG: COG3203
HOGENOM: HBG673855
OMA: NAPESEN
ProtClustDB: PRK10554
BioCyc: SFLE373384:SFV_2290-MONOMER
Taxonomy ID 373384
Gene Starting Position 2326756
Gene Ending Position 2327877
Gene Strand (Orientation) -
Protein Name outer membrane porin protein C
DNA Sequence 
>gi|110804074:2326756-2327877 Shigella flexneri 5 str. 8401, complete genome
ATTAGAACTGGTAAACCAGACCCAGAGCTACGATGTTATCAGTGTTGATGCCAGCGTCACGAGTGAACTG
GTTGTCGTCCAGCAGGTTGATTTTGTAGTCAACGTAGGTGGACATGTTTTTGTTGAAGTAGTAGGTCGCA
CCAACATCAACATATTTCAGGATATCTTCGTCGTCGTAGTTACGACCATTGATGACACCCAGGTTTTTAC
CTTTAGACTGCAGGTAAGCCAGGGACGGACGCAGACCGAAGTCGAACTGGTACTGAGCAACAGCTTCGAA
GTTCTGTGCTTTGTTCGCCCAACCCAAGTTGCCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCA
GCTAGGTAGATGTTGTTCGCGTCGTATTTCAGACCACCGGTGTAGGTTTCAGCGCGGTCGCCATTACCGA
TGTAACGCTCATCATAACGGTTCAGACCGAAGTTCTGGTCATCAGTACGTTTGGAGCTGGAAACTGCAGC
ACCGATACCGAAGCCTTCGTAATCATAAGTAATAGAACCGCCAACGCCGTCACCGTTCTGACGCAGAGCT
TCACGACCGTTGTTGGTCATGCCTTCACCTTCCGGGCTACCGTTTTTGCCCTGATACTGAACAGCGAAGT
TCAGACCGTCAACCAGACCAAAGAAGTCGGTGCTACGGTAGGTTGCGAAGCCGTTACCACGCTGCTGCAT
GAAGTTGTCAGAACCGTAAGTGTCACCACCGAATTCTGGCAGTACGTCGGTCCAGGAAGTTACGTCGTAA
ACTACGCCGTAGTTACGACCGTAGTCGAAAGAACCTACATCCTGGAATTTCAGACCTGCGAATGCCACAC
GGGTCCAGGAGTTGTTTTCGTTTTCAGCGCTGTTGCCCTGGATCTGATATTCCCACTGGCCGTAACCGGT
CAGCTGGTCAGTAACCTGAGTTTCACCTTTGAAGCCAAGACGCATGTAGGTCTGGTCGCCATCTACAGAC
TTGTCGTCAGAGAAATAGTGCAGGCCGTCTACTTTACCGTACAGATCTAATTTGTTGCCGTCTTTGTTGT
AAACTTCAGCAGCGTTTGCTGCGCCTGCTACCAGCAGAGCTGGGACCAGGAGGGACAGTACTTTAACTTT
CA
Protein Sequence 
>gi|110806189|ref|YP_689709.1| porin [Shigella flexneri 5 str. 8401] MKVKVLSLLVPALLVAGAANAAEVYNKDGNKLDLYGKVDGLHYFSDDKSVDGDQTYMRLGFKGETQVTDQLTGYGQWEYQIQGNSAENENNSWTRVAFAGLKFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYGSDNFMQQRGNGFATYRSTDFFGLVDGLNFAVQYQGKNGSPEGEGMTNNGREALRQNGDGVGGSITYDYEGFGIGAAVSSSKRTDDQNFGLNRYDERYIGNGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGNLGWANKAQNFEAVAQYQFDFGLRPSLAYLQSKGKNLGVINGRNYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNQFTRDAGINTDNIVALGLVYQF
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: ompC mutants were attenuated in their ability to spread cell to cell and kill epithelial cells, and had a negative Sereny test (Bernardini et al., 1993).
COG COG3203M, under M: Cell wall/membrane/envelope biogenesis
References
Bernardini et al., 1993: Bernardini ML, Sanna MG, Fontaine A, Sansonetti PJ. OmpC is involved in invasion of epithelial cells by Shigella flexneri. Infection and immunity. 1993; 61(9); 3625-3635. [PubMed: 8359885].