Search: for Help
About
Introduction
Statistics
Your PHIDIAS
Register or Login
Philert
Submission
Curated Data
Victors
BBP (Brucella)
Phinfo
Phinet
HazARD
Data Analysis
Phigen
Pacodom
BLAST
Help & Documents
Documents
FAQs
Links
Acknowledgements
Disclaimer
Contact Us
UMMS Logo

sodB from Shigella boydii CDC 3083-94

Victor ID 1668
Gene Name sodB from Shigella boydii CDC 3083-94
Sequence Strain (Species/Organism) Shigella boydii CDC 3083-94
NCBI Gene ID 6269987
NCBI Protein GI 187733707
Locus Tag SbBS512_E1853
Protein Accession YP_001880416.1
Other Database IDs UniProtKB-ID: B2U2G0_SHIB3
UniRef100: UniRef100_P0AGD5
UniRef90: UniRef90_P0AGD5
UniRef50: UniRef50_P0A2F5
UniParc: UPI00001639C0
EMBL: CP001063
EMBL-CDS: ACD09973.1
RefSeq_NT: NC_010658.1
EnsemblGenome: EBESCG00000073285.
EnsemblGenome_TRS: EBESCT00000074238
EnsemblGenome_PRO: EBESCP00000071557
GenomeReviews: CP001063_GR
KEGG: sbc:SbBS512_E1853
HOGENOM: HBG507761
OMA: VNWKFAE
ProtClustDB: PRK10543
Taxonomy ID 344609
Gene Starting Position 1696562
Gene Ending Position 1697143
Gene Strand (Orientation) +
Protein Name superoxide dismutase (Fe)
DNA Sequence 
>gi|187730020:1696562-1697143 Shigella boydii CDC 3083-94 chromosome, complete genome
AATGTCATTCGAATTACCTGCACTACCATATGCTAAAGATGCTCTGGCACCGCACATTTCTGCGGAAACT
ATCGAGTATCACTACGGCAAGCATCATCAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCG
CGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAAGGTGGCGTATTCAACAACGCAGCTCA
GGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGACTGGAAAAGTC
GCTGAAGCTATCGCCGCATCTTTTGGCAGCTTTGCCGATTTCAAAGCGCAGTTTACTGATGCAGCGATCA
AAAACTTTGGTTCTGGCTGGACCTGGCTGGTGAAAAACAGCGATGGCAAACTGGCTATCGTTTCAACCTC
TAACGCGGGTACTCCGCTGACCACCGATGCGACTCCGCTGCTGACCGTTGATGTCTGGGAACACGCTTAT
TACATCGACTATCGCAATGCACGTCCTGGCTATCTGGAGCACTTCTGGGCGCTGGTGAACTGGGAATTCG
TAGCGAAAAATCTCGCTGCATA
Protein Sequence 
>gi|187733707|ref|YP_001880416.1| superoxide dismutase [Shigella boydii CDC 3083-94] MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: sodB mutant is extremely sensitive to killing by phagocytes compared to the wild-type, and causes only mild damage in infection of rabbit ileal loops (Franzon et al., 1990).
COG COG0605P, under P: Inorganic ion transport and metabolism
References
Franzon et al., 1990: Franzon VL, Arondel J, Sansonetti PJ. Contribution of superoxide dismutase and catalase activities to Shigella flexneri pathogenesis. Infection and immunity. 1990; 58(2); 529-535. [PubMed: 2404874].