Search: for Help
About
Introduction
Statistics
Your PHIDIAS
Register or Login
Philert
Submission
Curated Data
Victors
BBP (Brucella)
Phinfo
Phinet
HazARD
Data Analysis
Phigen
Pacodom
BLAST
Help & Documents
Documents
FAQs
Links
Acknowledgements
Disclaimer
Contact Us
UMMS Logo

dksA from Shigella boydii CDC 3083-94

Victor ID 1657
Gene Name dksA from Shigella boydii CDC 3083-94
Sequence Strain (Species/Organism) Shigella boydii CDC 3083-94
NCBI Gene ID 6268971
NCBI Protein GI 187733763
Locus Tag SbBS512_E0136
Protein Accession YP_001878948.1
Other Database IDs UniProtKB-ID: B2U2Y9_SHIB3
UniRef100: UniRef100_P0ABS3
UniRef90: UniRef90_P0A1G6
UniRef50: UniRef50_Q89AR3
UniParc: UPI0000000B51
EMBL: CP001063
EMBL-CDS: ACD10029.1
RefSeq_NT: NC_010658.1
EnsemblGenome: EBESCG00000074123.
EnsemblGenome_TRS: EBESCT00000075076
EnsemblGenome_PRO: EBESCP00000072395
GenomeReviews: CP001063_GR
KEGG: sbc:SbBS512_E0136
HOGENOM: HBG728818
OMA: GEEYMND
ProtClustDB: PRK10778
Taxonomy ID 344609
Gene Starting Position 147218
Gene Ending Position 147673
Gene Strand (Orientation) -
Protein Name RNA polymerase-binding protein DksA
DNA Sequence
>gi|187730020:147218-147673 Shigella boydii CDC 3083-94 chromosome, complete genome
ATTAGCCAGCCATCTGTTTTTCGCGAATTTCAGCCAGCGTTTTGCAGTCGATGCACAGATCGGCTGTCGG
GCGCGCTTCCAGACGGCGAATACCAATTTCAACACCGCAGGATTCGCAGTAGCCGAAATCTTCGTCTTCC
ACTTTTTTCAGCGTCTTCTCGATCTTTTTGATCAGCTTACGCTCGCGATCGCGGTTACGCAGTTCGAGGC
TGAACTCTTCTTCCTGGGCTGCACGGTCTACCGGGTCCGGGAAGTTGGCTGCTTCATCCTGCATATGTGT
AACGGTGCGATCGACTTCATCCCTGAGTTGATTACGCCATGCTTCCAGAATACGACGGAAGTGCGCCAGC
TGGGCTTCATTCATATACTCTTCGCCCGGCTTCTCCTGATATGGTTCCACCCCAGCGATGGCGAGAATAC
TCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCA
Protein Sequence
>gi|187733763|ref|YP_001878948.1| RNA polymerase-binding transcription factor [Shigella boydii CDC 3083-94] MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: dksA mutants are able to invade cultured cell monlayers but are incapable of cell to cell spread (Mogull et al., 2001).
COG COG1734T, under T: Signal transduction mechanisms
References
Mogull et al., 2001: Mogull SA, Runyen-Janecky LJ, Hong M, Payne SM. dksA is required for intercellular spread of Shigella flexneri via an RpoS-independent mechanism. Infection and immunity. 2001; 69(9); 5742-5751. [PubMed: 11500451].