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spa47 from Shigella sonnei Ss046

Victor ID 1626
Gene Name spa47 from Shigella sonnei Ss046
Sequence Strain (Species/Organism) Shigella sonnei Ss046
NCBI Gene ID 3670855
NCBI Protein GI 74314948
Locus Tag SSON_P111
Protein Accession YP_313366.1
Other Database IDs UniProtKB-ID: Q3YTN1_SHISS
UniRef100: UniRef100_Q3YTN1
UniRef90: UniRef90_P0A1C1
UniRef50: UniRef50_P0A1C0
UniParc: UPI00005AAD01
EMBL: CP000039
EMBL-CDS: AAZ91131.1
RefSeq_NT: NC_007385.1
EnsemblGenome: EBESCG00000101971.
EnsemblGenome_TRS: EBESCT00000102927
EnsemblGenome_PRO: EBESCP00000098787
GenomeReviews: CP000039_GR
KEGG: ssn:SSON_P111
eggNOG: COG1157
HOGENOM: HBG565875
OMA: GHIYLSR
ProtClustDB: PRK08149
BioCyc: SSON300269:SSO_P111-MONOMER
Taxonomy ID 300269
Plasmid No pSS_046
Gene Starting Position 102447
Gene Ending Position 103739
Gene Strand (Orientation) +
Protein Name component of the Mxi-Spa secretion machinery; putative ATPase
DNA Sequence 
>gi|74314838:102447-103739 Shigella sonnei Ss046 plasmid pSS_046, complete sequence
AATGAGCTATACAAAATTGCTCACTCAATTATCTTTTCCTAATAGAATCTCGGGGCCAATCTTGGAAACA
AGTCTTAGCGATGTTTCGATTGGTGAGATTTGTAACATTCAGGCTGGAATTGAAAGTAATGAAATTGTTG
CAAGAGCTCAGGTTGTAGGATTTCATGATGAAAAAACAATATTAAGCTTGATTGGAAATTCTCGTGGACT
TTCACGGCAAACGTTGATTAAGCCCACTGCCCAGTTTCTTCATACGCAAGTCGGCCGTGGATTATTGGGT
GCAGTAGTCAATCCTTTAGGGGAGGTTACTGATAAGTTTGCTGTTACGGATAACAGTGAAATTCTTTATC
GACCTGTAGATAATGCTCCTCCGCTATATAGTGAAAGGGCTGCAATTGAGAAGCCTTTTTTAACAGGTAT
TAAGGTTATTGATTCTTTACTCACGTGTGGTGAAGGACAGCGAATGGGGATTTTTGCGTCAGCTGGTTGT
GGCAAAACTTTTCTCATGAATATGCTCATTGAACATAGTGGTGCTGATATATATGTTATTGGGTTAATTG
GTGAGCGAGGTCGAGAGGTTACAGAAACGGTTGATTATTTGAAAAACTCTGAGAAAAAAAACAGGTGTGT
TTTAGTATATGCAACTTCGGATTACTCTTCGGTTGATCGTTGTAATGCTGCATATATAGCCACTGCTATA
GCCGAATTTTTTAGGACTGAAGGACATAAAGTAGCGCTTTTTATTGATTCATTAACAAGGTATGCCAGAG
CATTACGTGATGTGGCCTTAGCCGCTGGAGAATCACCTGCCAGAAGAGGCTATCCGGTTTCGGTTTTTGA
TAGCTTACCCAGACTTCTTGAAAGGCCAGGAAAGTTAAAGGCAGGTGGCTCTATTACTGCATTTTACACT
GTTCTTTTGGAGGATGATGATTTTGCTGATCCATTAGCTGAAGAGGTAAGATCCATTTTAGATGGACATA
TATATTTGAGCAGAAATCTAGCCCAAAAAGGACAATTTCCTGCAATTGATTCCTTAAAAAGTATAAGCAG
GGTATTTACACAGGTTGTTGATGAAAAACATCGTATTATGGCCGCTGCATTTCGGGAGCTACTTTCTGAA
ATAGAAGAGCTAAGGACAATTATTGACTTTGGTGAATACAAACCGGGGGAGAATGCCTCTCAGGATAAAA
TCTACAACAAAATATCTGTTGTTGAGAGTTTTCTGAAGCAAGATTATCGACTCGGTTTTACTTATGAGCA
GACAATGGAGCTTATTGGTGAAACAATTAGATA
Protein Sequence 
>gi|74314948|ref|YP_313366.1| ATP synthase SpaL [Shigella sonnei Ss046] MSYTKLLTQLSFPNRISGPILETSLSDVSIGEICNIQAGIESNEIVARAQVVGFHDEKTILSLIGNSRGLSRQTLIKPTAQFLHTQVGRGLLGAVVNPLGEVTDKFAVTDNSEILYRPVDNAPPLYSERAAIEKPFLTGIKVIDSLLTCGEGQRMGIFASAGCGKTFLMNMLIEHSGADIYVIGLIGERGREVTETVDYLKNSEKKNRCVLVYATSDYSSVDRCNAAYIATAIAEFFRTEGHKVALFIDSLTRYARALRDVALAAGESPARRGYPVSVFDSLPRLLERPGKLKAGGSITAFYTVLLEDDDFADPLAEEVRSILDGHIYLSRNLAQKGQFPAIDSLKSISRVFTQVVDEKHRIMAAAFRELLSEIEELRTIIDFGEYKPGENASQDKIYNKISVVESFLKQDYRLGFTYEQTMELIGETIR
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: spa47 mutants form needle-less type III structure which is defective, and thus incapable of invasion of host cells (Tamano et al., 2000).
COG COG1157NU, under N: Cell motility; U: Intracellular trafficking, secretion, and vesicular transport
References
Tamano et al., 2000: Tamano K, Aizawa S, Katayama E, Nonaka T, Imajoh-Ohmi S, Kuwae A, Nagai S, Sasakawa C. Supramolecular structure of the Shigella type III secretion machinery: the needle part is changeable in length and essential for delivery of effectors. The EMBO journal. 2000; 19(15); 3876-3887. [PubMed: 10921870].