Search: for Help
About
Introduction
Statistics
Your PHIDIAS
Register or Login
Philert
Submission
Curated Data
Victors
BBP (Brucella)
Phinfo
Phinet
HazARD
Data Analysis
Phigen
Pacodom
BLAST
Help & Documents
Documents
FAQs
Links
Acknowledgements
Disclaimer
Contact Us
UMMS Logo

ompR from Shigella boydii Sb227

Victor ID 1567
Gene Name ompR from Shigella boydii Sb227
Sequence Strain (Species/Organism) Shigella boydii Sb227
NCBI Gene ID 3782375
NCBI Protein GI 82545760
Locus Tag SBO_3392
Protein Accession YP_409707.1
Other Database IDs UniProtKB-ID: Q31VM9_SHIBS
UniRef100: UniRef100_P0AA18
UniRef90: UniRef90_P0AA18
UniRef50: UniRef50_P0AA18
UniParc: UPI0000000AFA
EMBL: CP000036
EMBL-CDS: ABB67879.1
RefSeq_NT: NC_007613.1
EnsemblGenome: EBESCG00000078653.
EnsemblGenome_TRS: EBESCT00000079606
EnsemblGenome_PRO: EBESCP00000076753
GenomeReviews: CP000036_GR
KEGG: sbo:SBO_3392
HOGENOM: HBG753323
OMA: IEEDPTH
ProtClustDB: PRK09468
BioCyc: SBOY300268:SBO_3392-MONOMER
Taxonomy ID 300268
Gene Starting Position 3377960
Gene Ending Position 3378679
Gene Strand (Orientation) -
Protein Name response regulator (sensor, EnvZ) affecting transcription of ompC and ompF: outer membrane protein synthesis
DNA Sequence 
>gi|82542618:3377960-3378679 Shigella boydii Sb227, complete genome
CTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGGCCCCAAACGGTCTGAATGTAACGCGGATG
CGCTGGATCTTCTTCTACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAA
TATTCACGACCACGGGCAAGGTTCATCAGCTTATCGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTG
CCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTCATCTTCGCGGAACATTTCGCGCGTACC
GAGGTTAAGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTC
GCCTGACGACGCAGCACCGCACGAATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGT
CGTCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGG
CATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTAACATTAAATCC
AGTACCATAAGATGGAAAGATTCACGAGTCAGCAGGCGATCCATCTGTTCTGCATTAGCGACGCTTCGAA
CCTGGAAGCCTTGTTCGGTGAGATAACGTTCCAGCAGCGCACGCAGGCGCATGTCGTCATCGACCACCAG
AATCTTGTAGTTCTCTTGCA
Protein Sequence 
>gi|82545760|ref|YP_409707.1| osmolarity response regulator [Shigella boydii Sb227] MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMPLTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAHPRYIQTVWGLGYVFVPDGSKA
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: mutant of the ompB locus (both the envZ and ompR genes) showed attenuated virulence in HeLa cells, and a weak response to a Serany test (Bernardini et al., 1990).
COG COG0745TK, under T: Signal transduction mechanisms; K: Transcription
References
Bernardini et al., 1990: Bernardini ML, Fontaine A, Sansonetti PJ. The two-component regulatory system ompR-envZ controls the virulence of Shigella flexneri. Journal of bacteriology. 1990; 172(11); 6274-6281. [PubMed: 2121709].