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spa47 from Shigella dysenteriae Sd197

Victor ID 1506
Gene Name spa47 from Shigella dysenteriae Sd197
Sequence Strain (Species/Organism) Shigella dysenteriae Sd197
NCBI Gene ID 3776543
NCBI Protein GI 82524593
Locus Tag SDY_P187
Protein Accession YP_406188.1
Other Database IDs UniProtKB-ID: Q326Q8_SHIDS
UniRef100: UniRef100_Q326Q8
UniRef90: UniRef90_P0A1C1
UniRef50: UniRef50_P0A1C0
UniParc: UPI00005E3A1D
EMBL: CP000035
EMBL-CDS: ABB64700.1
RefSeq_NT: NC_007607.1
EnsemblGenome: EBESCG00000084021.
EnsemblGenome_TRS: EBESCT00000084975
EnsemblGenome_PRO: EBESCP00000081799
GenomeReviews: CP000035_GR
KEGG: sdy:SDY_P187
NMPDR: fig|216598.1.peg.2907
eggNOG: COG1157
HOGENOM: HBG565875
OMA: GHIYLSR
ProtClustDB: PRK08149
BioCyc: SDYS300267:SDY_P187-MONOMER
Taxonomy ID 300267
Plasmid No pSD1_197
Gene Starting Position 151319
Gene Ending Position 152611
Gene Strand (Orientation) +
Protein Name component of the Mxi-Spa secretion machinery, putative ATPase
DNA Sequence 
>gi|82524407:151319-152611 Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence
AATGAGCTATACAAAATTGCTCACTCAATTATCTTTTCCTAATAAAATCTCGGGGCCAATCTTGGAAACA
AGTCTTAGCGATGTTTCGATTGGTGAGATTTGTAACATTCAGGCTGGAATTGAAAGTAATGAAATTGTTG
CAAGAGCTCAAGTTGTAGGATTTCATGATGAAAAAACGATATTAAGCCTGATTGGAAATTCTCGTGGGCT
TTCACGGCAAACGTTGATTAAGCCCACTGCCCAGTTTCTTCATACGCAAGTCGGCCGAGGATTATTGGGA
GCAGTAGTCAATCCTTTAGGGGAGGTTACTGATAAGTTTGCTGTTACGGATAACAGTGAAATCCTTTATC
GACCTGTAGATAATGCTCCTCCGCTATATAGTGAAAGGGCTGCAATTGAGAAGCCTTTTTTAACAGGTGT
TAAGGTTATTGATTCTTTACTCACGTGTGGTGAAGGACAGCGAATGGGGATTTTTGCGTCAGCTGGTTGT
GGCAAAACTTTTCTCATGAATATGCTCATTGAACATAGTGGTGCTGATATATATGTTATTGGGTTAATTG
GTGAGCGAGGTCGAGAGGTTACAGAAACGGTTGATTATTTGAAAAACTCTGAGAAAAAAAGCAGGTGTGT
TTTAGTATATGCAACTTCGGATTACTCTTCGGTTGATCGTTGTAATGCTGCATATATAGCCACTGCTATA
GCCGAATTTTTTAGGACTGAAGGACATAAAGTAGCGCTTTTTATTGATTCATTAACAAGGTATGCCAGAG
CATTACGTGATGTGGCCTTAGCCGCTGGAGAATCACCTGCTAGAAGAGGCTATCCGGTTTCGGTTTTTGA
TAGCTTACCCAGACTTCTTGAAAGGCCAGGAAAGTTAAAGGCAGGTGGCTCTATTACTGCATTTTATACT
GTTCTTTTGGAGGATGATGATTTTGCTGATCCATTGGCTGAAGAGGTTAGATCCATTTTAGATGGACATA
TATATTTGAGCAGAAATCTAGCCCAAAAAGGACAATTTCCTGCAATTGATTCCTTAAAAAGTATAAGCAG
AGTATTTACACAGGTTGTTGATGAAAAACATCGTATTATGGCCGCTGCATTTCGGGAGCTACTTTCTGAA
ATAGAAGAGCTAAGGACAATTATTGACTTTGGTGAATACAAACCGGGAGAGAATGCCTCTCAGGATAAAA
TCTACAACAAAATATCTGTTGTTGAGAGTTTTCTGAAGCAAGATTATCGACTCGGTTTTACTTATGAGCA
GACAATGGAGCTTATTGGTGAAACAATTAGATA
Protein Sequence 
>gi|82524593|ref|YP_406188.1| ATP synthase SpaL [Shigella dysenteriae Sd197] MSYTKLLTQLSFPNKISGPILETSLSDVSIGEICNIQAGIESNEIVARAQVVGFHDEKTILSLIGNSRGLSRQTLIKPTAQFLHTQVGRGLLGAVVNPLGEVTDKFAVTDNSEILYRPVDNAPPLYSERAAIEKPFLTGVKVIDSLLTCGEGQRMGIFASAGCGKTFLMNMLIEHSGADIYVIGLIGERGREVTETVDYLKNSEKKSRCVLVYATSDYSSVDRCNAAYIATAIAEFFRTEGHKVALFIDSLTRYARALRDVALAAGESPARRGYPVSVFDSLPRLLERPGKLKAGGSITAFYTVLLEDDDFADPLAEEVRSILDGHIYLSRNLAQKGQFPAIDSLKSISRVFTQVVDEKHRIMAAAFRELLSEIEELRTIIDFGEYKPGENASQDKIYNKISVVESFLKQDYRLGFTYEQTMELIGETIR
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: spa47 mutants form needle-less type III structure which is defective, and thus incapable of invasion of host cells (Tamano et al., 2000).
COG COG1157NU, under N: Cell motility; U: Intracellular trafficking, secretion, and vesicular transport
References
Tamano et al., 2000: Tamano K, Aizawa S, Katayama E, Nonaka T, Imajoh-Ohmi S, Kuwae A, Nagai S, Sasakawa C. Supramolecular structure of the Shigella type III secretion machinery: the needle part is changeable in length and essential for delivery of effectors. The EMBO journal. 2000; 19(15); 3876-3887. [PubMed: 10921870].