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degU

Victor ID 1421
Gene Name degU
Sequence Strain (Species/Organism) Listeria monocytogenes str. 4b F2365
NCBI Gene ID 2797137
NCBI Protein GI 46908687
Locus Tag LMOf2365_2488
Genbank Accession AE017262
Protein Accession YP_015076
Other Database IDs UniProtKB-ID: Q71WR3_LISMF
UniRef100: UniRef100_B8DBJ6
UniRef90: UniRef90_B8DBJ6
UniRef50: UniRef50_B7GL14
UniParc: UPI000005531F
EMBL: AE017262
EMBL-CDS: AAT05253.1
RefSeq_NT: NC_002973.6
HSSP: P10957
GenomeReviews: AE017262_GR
KEGG: lmf:LMOf2365_2488
TIGR: LMOf2365_2488
eggNOG: COG2197
HOGENOM: HBG753323
OMA: HILIREG
ProtClustDB: CLSK873660
BioCyc: LMON265669:LMOF2365_2488-MONOMER
Taxonomy ID 265669
Gene Starting Position 2548609
Gene Ending Position 2549295
Gene Strand (Orientation) -
Protein Name DNA-binding response regulator DegU
Protein pI 6.8
Protein Weight 23336.2
Protein Length 228
Protein Note identified by similarity to SP:P13800; match to protein family HMM PF00072; match to protein family HMM PF00196
DNA Sequence 
>gi|85700163:2548609-2549295 Listeria monocytogenes str. 4b F2365, complete genome
TTTAGCGAATATATACCCAGCCGTGCTTGATTGCCGTTACCACCGCTTGAGTCCTATCATTCACTTTCAT
TTTTTGTAAAATACTACTTACATGGTTTTTTACTGTTTTTTCACTAATGAAAAGTGTCTCCCCAATTCCG
CGGTTACTTTTTCCATCGGTAAGAAGTTGCAATACCTCGCACTCTCTATGCGTTAAGATGTGTAGTGGCA
TTTTGACTTCAGGTTGTTGGTAGCCATAAACACCTTGAGAAGTGTTAGTGCTTGCTAAATGGCGGTATTC
ACGAATTAATTTAATCGCTACACGTGGATGAATATACGCGCCTCCATTATCAACAATTTTTACAGCTTCT
ACAAGTTCATGGGCATCCATTTCTTTTAATAAATAACCGACTGCTCCAGCTCTAAGCGCTTCTGTTACAT
ATTCATCTGTATCATGAATAGTCAAGACGATTACTTTGATGCTAGGAAATTGACGTACTAGCATTTCAGT
TGCATCTAGTCCGTTGACAGTTGGCATATTAATATCCATTAAAACAATATCTGGTTTATATTCGCGAACT
TTTGCTACGATATTTTTACCATTTTCAGCTTCCGCTACGACCTCAAAAGAATCTTCCAACTCTAAAATTC
GCTTGATACCTTCGCGAAACAACTGATGATCATCTACAATCATGATTTTGAGTGCCA
Protein Sequence 
>gi|46908687|ref|YP_015076.1| DNA-binding response regulator DegU [Listeria monocytogenes str. 4b F2365]
MALKIMIVDDHQLFREGIKRILELEDSFEVVAEAENGKNIVAKVREYKPDIVLMDINMPTVNGLDATEML
VRQFPSIKVIVLTIHDTDEYVTEALRAGAVGYLLKEMDAHELVEAVKIVDNGGAYIHPRVAIKLIREYRH
LASTNTSQGVYGYQQPEVKMPLHILTHRECEVLQLLTDGKSNRGIGETLFISEKTVKNHVSSILQKMKVN
DRTQAVVTAIKHGWVYIR
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: mutant strain showed reduction in motility, attenuated in mice (Williams et al., 2005).
COG COG2197TK, under T: Signal transduction mechanisms; K: Transcription
References
Williams et al., 2005: Williams T, Joseph B, Beier D, Goebel W, Kuhn M. Response regulator DegU of Listeria monocytogenes regulates the expression of flagella-specific genes. FEMS microbiology letters. 2005; 252(2); 287-298. [PubMed: 16213668].