Search: for Help
About
Introduction
Statistics
Your PHIDIAS
Register or Login
Philert
Submission
Curated Data
Victors
BBP (Brucella)
Phinfo
Phinet
HazARD
Data Analysis
Phigen
Pacodom
BLAST
Help & Documents
Documents
FAQs
Links
Acknowledgements
Disclaimer
Contact Us
UMMS Logo

hfq from Yersinia pestis CO92

Victor ID 1134
Gene Name hfq from Yersinia pestis CO92
Sequence Strain (Species/Organism) Yersinia pestis CO92
NCBI Gene ID 1173219
NCBI Protein GI 16120708
Locus Tag YPO0373
Protein Accession NP_404021.1
Other Database IDs UniProtKB-ID: HFQ_YERPE
UniRef100: UniRef100_A7FMX9
UniRef90: UniRef90_A8G8U9
UniRef50: UniRef50_A4W5R3
UniParc: UPI0000165AE8
EMBL: AL590842
EMBL: AE009952
EMBL: AE017042
EMBL-CDS: CAL19055.1
EMBL-CDS: AAM84218.1
EMBL-CDS: AAS60799.1
RefSeq_NT: NC_004088.1
RefSeq_NT: NC_005810.1
RefSeq_NT: NC_003143.1
GenomeReviews: AE009952_GR
GenomeReviews: AE017042_GR
GenomeReviews: AL590842_GR
KEGG: ype:YPO0373
KEGG: ypk:y0630
KEGG: ypm:YP_0529
HOGENOM: HBG645207
OMA: KNTVTQM
ProtClustDB: PRK00395
BioCyc: Y
Taxonomy ID 214092
Gene Starting Position 387943
Gene Ending Position 388248
Gene Strand (Orientation) +
Protein Name RNA-binding protein Hfq
DNA Sequence 
>gi|16120353:387943-388248 Yersinia pestis CO92 chromosome, complete genome
AATGGCTAAGGGGCAATCTTTGCAAGATCCGTTCCTGAACGCATTGCGTCGTGAACGGGTTCCGGTTTCT
ATTTATTTAGTGAATGGTATTAAACTGCAGGGCCAAGTTGAGTCTTTTGATCAGTTTGTCATTCTGTTAA
AAAATACAGTCAGCCAGATGGTTTATAAGCACGCCATCTCTACTGTTGTGCCTTCTCGTCCGGTTTCGCA
TCACAGCAATACTCCGAGCGGTAGCACCAATAATTATCATGGTAGTAATCCGTCTGCGCCGCAACAGCCG
CAGCAGGACAGTGATGACGCTGAATA
Protein Sequence 
>gi|218927576|ref|YP_002345451.1| RNA-binding protein Hfq [Yersinia pestis CO92] MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQVESFDQFVILLKNTVSQMVYKHAISTVVPSRPVSHHSNTPSGSTNNYHGSNPSAPQQPQQDSDDAE
Molecule Role Virulence factor
Molecule Role Annotation MUTATION: hfq mutant is highly attenuated in mice after subcutaneous or intravenous injection and has attenuated survival in macrophages (Geng et al., 2009).
References
Geng et al., 2009: Geng J, Song Y, Yang L, Feng Y, Qiu Y, Li G, Guo J, Bi Y, Qu Y, Wang W, Wang X, Guo Z, Yang R, Han Y. Involvement of the post-transcriptional regulator Hfq in Yersinia pestis virulence. PloS one. 2009; 4(7); e6213. [PubMed: 19593436].