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Documentation: Genomes included in PHIDIAS PGBrowser and BLAST libraries

Table 1. Bacterial genomes included in PHIDIAS PGBrowser and BLAST libraries.

Pathogen species Strains Chromosome Plasmid Genome Accession Nuccore ID CMR
1 Actinobacillus pleuropneumoniae 1 Actinobacillus pleuropneumoniae NR_044752 343206162
2 Actinobacillus pleuropneumoniae p11745 NC_013546 270208688
3 Actinobacillus pleuropneumoniae p12494 NC_010889 190570462
4 Actinobacillus pleuropneumoniae p9555 NC_010069 161598472
5 Actinobacillus pleuropneumoniae p9956 NC_010042 161598466
6 Actinobacillus pleuropneumoniae pARD3079 NC_009625 150406443
7 Actinobacillus pleuropneumoniae pHB0503 NC_010795 189332434
8 Actinobacillus pleuropneumoniae pKMA2425 NC_007098 66968618
9 Actinobacillus pleuropneumoniae pMS260 NC_005312 40804641
10 Actinobacillus pleuropneumoniae pPSAS1522 NC_007099 66968624
11 Actinobacillus pleuropneumoniae pTYM1 NC_003125 15983528
12 Actinobacillus pleuropneumoniae L20 NC_009053 126207488
13 Actinobacillus pleuropneumoniae serovar 3 str. JL03 NC_010278 165975457
14 Actinobacillus pleuropneumoniae serovar 7 str. AP76 NC_010939 190149269
15 Actinobacillus pleuropneumoniae serovar 7 str. AP76 ABB7_B NC_010941 190151404
16 Actinobacillus pleuropneumoniae serovar 7 str. AP76 APP7_A NC_010942 190151409
17 Actinobacillus pleuropneumoniae serovar 7 str. AP76 APP7_C NC_010940 190151401
2 Aeromonas salmonicida 1 Aeromonas salmonicida NR_040829 343200142
2 Aeromonas salmonicida pRAS3.2 NC_003124 15983520
3 Aeromonas salmonicida subsp. salmonicida NR_043324 343202838
4 Aeromonas salmonicida subsp. salmonicida pAsal1 NC_004338 24210992
5 Aeromonas salmonicida subsp. salmonicida pAsal2 NC_004339 24210997
6 Aeromonas salmonicida subsp. salmonicida pAsal3 NC_004340 24211005
7 Aeromonas salmonicida subsp. salmonicida pAsal6 NC_009352 294509186
8 Aeromonas salmonicida subsp. salmonicida pRAS3.1 NC_003123 15983531
9 Aeromonas salmonicida subsp. salmonicida A449 NC_009348 145297124
10 Aeromonas salmonicida subsp. salmonicida A449 4 NC_009349 145301211
11 Aeromonas salmonicida subsp. salmonicida A449 5 NC_009350 145301385
12 Aeromonas salmonicida subsp. salmonicida A449 pAsa1 NC_004923 32453760
13 Aeromonas salmonicida subsp. salmonicida A449 pAsa2 NC_004925 32453780
14 Aeromonas salmonicida subsp. salmonicida A449 pAsa3 NC_004924 32453769
3 Bacillus anthracis 1 Bacillus anthracis pX01 NC_001496 10956247
2 Bacillus anthracis pX02 NC_002146 10956390
3 Bacillus anthracis str. 'Ames Ancestor' NC_007530 50196905 gb6
4 Bacillus anthracis str. 'Ames Ancestor' pXO1 NC_007322 47566322 gb6
5 Bacillus anthracis str. 'Ames Ancestor' pXO2 NC_007323 50163691 gb6
6 Bacillus anthracis str. A0248 NC_012659 229599883
7 Bacillus anthracis str. A0248 pXO1 NC_012656 229599713
8 Bacillus anthracis str. A0248 pXO2 NC_012655 229599623
9 Bacillus anthracis str. A2012 pXO1 NC_003980 21392688
10 Bacillus anthracis str. A2012 pXO2 NC_003981 21392893
11 Bacillus anthracis str. Ames NC_003997 30260195 gba
12 Bacillus anthracis str. CDC 684 NC_012581 227812678
13 Bacillus anthracis str. CDC 684 pX01 NC_012579 227811427
14 Bacillus anthracis str. CDC 684 pX02 NC_012577 227811309
15 Bacillus anthracis str. H9401 NC_017729 386733873
16 Bacillus anthracis str. H9401 BAP1 NC_017726 386733559
17 Bacillus anthracis str. H9401 BAP2 NC_017727 386733762
18 Bacillus anthracis str. Sterne NC_005945 49183039 ntba05
4 Bartonella bacilliformis 1 Bartonella bacilliformis NR_044743 343206153
2 Bartonella bacilliformis KC583 NC_008783 121601635
5 Bartonella henselae 1 Bartonella henselae str. Houston-1 NC_005956 49474831
6 Bartonella quintana 1 Bartonella tribocorum pKM19s NC_010615 187729954
2 Bartonella tribocorum CIP 105476 NC_010161 163867306
3 Bartonella tribocorum CIP 105476 pBT01 NC_010160 163659859
7 Bordetella avium 1 Bordetella avium NR_041769 343201082
2 Bordetella avium 197N NC_010645 187476514
8 Bordetella pertussis 1 Bordetella pertussis pBP136 NC_008459 116006736
2 Bordetella pertussis CS NC_017223 384202563
3 Bordetella pertussis Tohama I NC_002929 33591275
9 Borrelia 1 Borrelia afzelii ACA-1 cp26 NC_011650 216997227
2 Borrelia afzelii ACA-1 cp32-1 NC_011647 216968420
3 Borrelia afzelii ACA-1 cp32-3 NC_011651 216997724
4 Borrelia afzelii ACA-1 cp32-4 NC_011649 216996631
5 Borrelia afzelii ACA-1 cp32-5 NC_011648 216969075
6 Borrelia afzelii ACA-1 lp17 NC_011789 219364474
7 Borrelia afzelii ACA-1 lp28-1 NC_011787 219048252
8 Borrelia afzelii ACA-1 lp28-2 NC_011788 219364337
9 Borrelia afzelii ACA-1 lp28-3 NC_011793 219052319
10 Borrelia afzelii ACA-1 lp28-4 NC_011791 219049287
11 Borrelia afzelii ACA-1 lp28-7 NC_011794 219053343
12 Borrelia afzelii ACA-1 lp32-10 NC_011790 219364539
13 Borrelia afzelii ACA-1 lp38 NC_011792 219364624
14 Borrelia afzelii ACA-1 lp54 NC_011786 218964018
15 Borrelia afzelii PKo NC_008277 111114823
16 Borrelia afzelii PKo NC_017238 384206503
17 Borrelia afzelii PKo cp26 NC_017229 384206192
18 Borrelia afzelii PKo cp27 NC_008274 111074118
19 Borrelia afzelii PKo cp30 NC_008273 111074074
20 Borrelia afzelii PKo cp32-1 NC_017230 384206220
21 Borrelia afzelii PKo cp32-11 NC_017224 384206409
22 Borrelia afzelii PKo cp32-12 NC_017225 384206020
23 Borrelia afzelii PKo cp32-3 NC_017226 384206063
24 Borrelia afzelii PKo cp32-5 NC_017227 384206106
25 Borrelia afzelii PKo cp32-7 NC_017231 384206262
26 Borrelia afzelii PKo cp32-9 NC_017228 384206150
27 Borrelia afzelii PKo lp17 NC_017232 384206380
28 Borrelia afzelii PKo lp25 NC_008569 117621834
29 Borrelia afzelii PKo lp28 NC_008568 117621799
30 Borrelia afzelii PKo lp28-2 NC_017239 384206338
31 Borrelia afzelii PKo lp28-3 NC_017233 384206297
32 Borrelia afzelii PKo lp28-4 NC_017234 384206319
33 Borrelia afzelii PKo lp28-7 NC_017235 384206451
34 Borrelia afzelii PKo lp28-8 NC_017236 384206482
35 Borrelia afzelii PKo lp32 NC_008567 117621743
36 Borrelia afzelii PKo lp32-10 NC_017240 384207328
37 Borrelia afzelii PKo lp34 NC_008566 117621706
38 Borrelia afzelii PKo lp38 NC_017237 384207453
39 Borrelia afzelii PKo lp54 NC_017241 384207382
40 Borrelia afzelii PKo lp60 NC_008564 117621570
41 Borrelia afzelii PKo lp60-2 NC_008565 117621646
42 Borrelia bissettii DN127 NC_015921 343127324
43 Borrelia bissettii DN127 cp26 NC_015907 343126945
44 Borrelia bissettii DN127 cp32-11 NC_015903 343126711
45 Borrelia bissettii DN127 cp32-3 NC_015908 343126973
46 Borrelia bissettii DN127 cp32-4 NC_015904 343126758
47 Borrelia bissettii DN127 cp32-5 NC_015909 343127016
48 Borrelia bissettii DN127 cp32-6 NC_015905 343126801
49 Borrelia bissettii DN127 cp32-7 NC_015910 343127060
50 Borrelia bissettii DN127 cp32-quad NC_015906 343126844
51 Borrelia bissettii DN127 cp9 NC_015911 343127105
52 Borrelia bissettii DN127 lp17 NC_015915 343127118
53 Borrelia bissettii DN127 lp25 NC_015922 343128166
54 Borrelia bissettii DN127 lp28-3 NC_015916 343128141
55 Borrelia bissettii DN127 lp28-4 NC_015917 343127152
56 Borrelia bissettii DN127 lp28-7 NC_015918 343127183
57 Borrelia bissettii DN127 lp54 NC_015919 343127253
58 Borrelia bissettii DN127 lp56 NC_015920 343127220
59 Borrelia crocidurae str. Achema NC_017808 386859226
60 Borrelia crocidurae str. Achema unnamed NC_017800 386858843
61 Borrelia crocidurae str. Achema unnamed NC_017821 386858648
62 Borrelia crocidurae str. Achema unnamed NC_017789 386858640
63 Borrelia crocidurae str. Achema unnamed NC_017799 386858623
64 Borrelia crocidurae str. Achema unnamed NC_017801 386858845
65 Borrelia crocidurae str. Achema unnamed NC_017795 386858840
66 Borrelia crocidurae str. Achema unnamed NC_017816 386858645
67 Borrelia crocidurae str. Achema unnamed NC_017781 386858626
68 Borrelia crocidurae str. Achema unnamed NC_017776 386644995
69 Borrelia crocidurae str. Achema unnamed NC_017820 386860119
70 Borrelia crocidurae str. Achema unnamed NC_017815 386860091
71 Borrelia crocidurae str. Achema unnamed NC_017797 386859201
72 Borrelia crocidurae str. Achema unnamed NC_017778 386859044
73 Borrelia crocidurae str. Achema unnamed NC_017822 386859015
74 Borrelia crocidurae str. Achema unnamed NC_017817 386858972
75 Borrelia crocidurae str. Achema unnamed NC_017810 386858954
76 Borrelia crocidurae str. Achema unnamed NC_017794 386858925
77 Borrelia crocidurae str. Achema unnamed NC_017775 386858858
78 Borrelia crocidurae str. Achema unnamed NC_017814 386858829
79 Borrelia crocidurae str. Achema unnamed NC_017811 386858811
80 Borrelia crocidurae str. Achema unnamed NC_017798 386858793
81 Borrelia crocidurae str. Achema unnamed NC_017788 386858754
82 Borrelia crocidurae str. Achema unnamed NC_017785 386858702
83 Borrelia crocidurae str. Achema unnamed NC_017783 386858678
84 Borrelia crocidurae str. Achema unnamed NC_017779 386858652
85 Borrelia crocidurae str. Achema unnamed NC_017818 386860095
86 Borrelia crocidurae str. Achema unnamed NC_017780 386859192
87 Borrelia crocidurae str. Achema unnamed NC_017777 386859037
88 Borrelia crocidurae str. Achema unnamed NC_017819 386859010
89 Borrelia crocidurae str. Achema unnamed NC_017813 386858961
90 Borrelia crocidurae str. Achema unnamed NC_017809 386858947
91 Borrelia crocidurae str. Achema unnamed NC_017787 386858865
92 Borrelia crocidurae str. Achema unnamed NC_017774 386858849
93 Borrelia crocidurae str. Achema unnamed NC_017812 386858817
94 Borrelia crocidurae str. Achema unnamed NC_017802 386858806
95 Borrelia crocidurae str. Achema unnamed NC_017796 386858760
96 Borrelia crocidurae str. Achema unnamed NC_017786 386858706
97 Borrelia crocidurae str. Achema unnamed NC_017784 386858688
98 Borrelia crocidurae str. Achema unnamed NC_017782 386858667
99 Borrelia duttonii 44-kb linear plasmid NC_008442 115534860
100 Borrelia duttonii Ly NC_011229 203283926
101 Borrelia duttonii Ly pl11 NC_011224 203283903
102 Borrelia duttonii Ly pl15 NC_011226 203283912
103 Borrelia duttonii Ly pl165 NC_011247 203288506
104 Borrelia duttonii Ly pl23 NC_011257 203288797
105 Borrelia duttonii Ly pl23b NC_011259 203288819
106 Borrelia duttonii Ly pl26 NC_011261 203288832
107 Borrelia duttonii Ly pl27 NC_011265 203288911
108 Borrelia duttonii Ly pl28 NC_011245 203288469
109 Borrelia duttonii Ly pl31 NC_011262 203288867
110 Borrelia duttonii Ly pl32 NC_011264 203288888
111 Borrelia duttonii Ly pl35 NC_011248 203288641
112 Borrelia duttonii Ly pl36 NC_011249 203288661
113 Borrelia duttonii Ly pl40 NC_011250 203288682
114 Borrelia duttonii Ly pl41 NC_011251 203288701
115 Borrelia duttonii Ly pl42 NC_011254 203288730
116 Borrelia duttonii Ly pl70 NC_011256 203288751
117 Borrelia garinii NR_043413 343202919
118 Borrelia garinii BgVir linear NC_017717 386853410
119 Borrelia garinii BgVir cp26 NC_017725 386854243
120 Borrelia garinii BgVir lp54 NC_017804 386853317
121 Borrelia garinii Far04 Far04_cp26 NC_011844 219722982
122 Borrelia garinii Far04 Far04_lp17 NC_011871 219783938
123 Borrelia garinii Far04 Far04_lp25 NC_011875 219788340
124 Borrelia garinii Far04 Far04_lp28-1 NC_011873 219873306
125 Borrelia garinii Far04 Far04_lp32-10 NC_011869 219873194
126 Borrelia garinii Far04 Far04_lp36 NC_011867 219873044
127 Borrelia garinii Far04 Far04_lp54 NC_011877 219873355
128 Borrelia garinii PBi linear NC_006156 51598263
129 Borrelia garinii PBi cp26 NC_006128 51038597
130 Borrelia garinii PBi lp54 NC_006129 51038624
131 Borrelia garinii PBr PBr_cp26 NC_011840 219718436
132 Borrelia garinii PBr PBr_cp32-10 NC_011842 219869986
133 Borrelia garinii PBr PBr_cp32-5 NC_011848 219723073
134 Borrelia garinii PBr PBr_lp17 NC_011861 219723586
135 Borrelia garinii PBr PBr_lp25 NC_011856 219872346
136 Borrelia garinii PBr PBr_lp28-1 NC_011854 219872301
137 Borrelia garinii PBr PBr_lp28-3 NC_011858 219872400
138 Borrelia garinii PBr PBr_lp28-4 NC_011860 219872498
139 Borrelia garinii PBr PBr_lp28-7 NC_011855 219723496
140 Borrelia garinii PBr PBr_lp36 NC_011857 219723532
141 Borrelia garinii PBr PBr_lp54 NC_011859 219872422
142 Borrelia hermsii DAH NC_010673 187917883
143 Borrelia recurrentis A1 NC_011244 203287471
144 Borrelia recurrentis A1 pl124 NC_011246 203288272
145 Borrelia recurrentis A1 pl23 NC_011252 203288364
146 Borrelia recurrentis A1 pl33 NC_011253 203288382
147 Borrelia recurrentis A1 pl35 NC_011255 203288400
148 Borrelia recurrentis A1 pl37 NC_011258 203288416
149 Borrelia recurrentis A1 pl53 NC_011260 203288436
150 Borrelia recurrentis A1 pl6 NC_011263 203288465
151 Borrelia sp. SV1 SV1_cp26 NC_012267 225576379
152 Borrelia sp. SV1 SV1_cp32-3 NC_012252 225575940
153 Borrelia sp. SV1 SV1_cp32-4 NC_012260 225622133
154 Borrelia sp. SV1 SV1_cp32-7 NC_012265 225576292
155 Borrelia sp. SV1 SV1_lp17 NC_012242 225571769
156 Borrelia sp. SV1 SV1_lp28-2 NC_012239 225621834
157 Borrelia sp. SV1 SV1_lp28-4 NC_012230 225621594
158 Borrelia sp. SV1 SV1_lp32-12 NC_012247 225621889
159 Borrelia sp. SV1 SV1_lp54 NC_012234 225621665
160 Borrelia spielmanii A14S A14S_cp26 NC_012132 224586545
161 Borrelia spielmanii A14S A14S_lp17 NC_012200 224985557
162 Borrelia spielmanii A14S A14S_lp28-3 NC_012183 224984542
163 Borrelia spielmanii A14S A14S_lp28-4 NC_012173 224984256
164 Borrelia spielmanii A14S A14S_lp28-8 NC_012181 224984452
165 Borrelia spielmanii A14S A14S_lp36 NC_012190 224984898
166 Borrelia spielmanii A14S A14S_lp38 NC_012176 224984345
167 Borrelia spielmanii A14S A14S_lp54 NC_012164 224796457
168 Borrelia turicatae 91E135 NC_008710 119952806
169 Borrelia valaisiana VS116 VS116_cp26 NC_012129 224586459
170 Borrelia valaisiana VS116 VS116_cp32-10 NC_012133 224586575
171 Borrelia valaisiana VS116 VS116_cp32-2-7 NC_012131 224586487
172 Borrelia valaisiana VS116 VS116_cp32-5 NC_012128 224586416
173 Borrelia valaisiana VS116 VS116_cp9 NC_012130 224586532
174 Borrelia valaisiana VS116 VS116_lp17 NC_012180 224796743
175 Borrelia valaisiana VS116 VS116_lp25 NC_012166 224984009
176 Borrelia valaisiana VS116 VS116_lp28-3 NC_012185 224984639
177 Borrelia valaisiana VS116 VS116_lp28-8 NC_012169 224796528
178 Borrelia valaisiana VS116 VS116_lp36 NC_012204 224985707
179 Borrelia valaisiana VS116 VS116_lp54 NC_012177 224984381
10 Borrelia burgdorferi 1 Borrelia burgdorferi NR_044732 343206143
2 Borrelia burgdorferi cp18-2 NC_004971 32455274
3 Borrelia burgdorferi Ip21 NC_008443 115534916
4 Borrelia burgdorferi lp16.9 NC_004988 32455306
5 Borrelia burgdorferi 118a 118a_cp26 NC_012261 225576166
6 Borrelia burgdorferi 118a 118a_cp32-10 NC_012257 225622042
7 Borrelia burgdorferi 118a 118a_cp32-13 NC_012264 225576249
8 Borrelia burgdorferi 118a 118a_cp32-4 NC_012268 225576407
9 Borrelia burgdorferi 118a 118a_cp32-5 NC_012262 225576194
10 Borrelia burgdorferi 118a 118a_cp32-6 NC_012266 225576335
11 Borrelia burgdorferi 118a 118a_cp32-7-9 NC_012253 225575982
12 Borrelia burgdorferi 118a 118a_cp32-8 NC_012251 225575896
13 Borrelia burgdorferi 118a 118a_cp9 NC_012256 225576112
14 Borrelia burgdorferi 118a 118a_lp17 NC_012243 225621868
15 Borrelia burgdorferi 118a 118a_lp25 NC_012238 225621813
16 Borrelia burgdorferi 118a 118a_lp28-3 NC_012236 225553165
17 Borrelia burgdorferi 118a 118a_lp28-4 NC_012240 225571661
18 Borrelia burgdorferi 118a 118a_lp28-5 NC_012248 225575832
19 Borrelia burgdorferi 118a 118a_lp28-6 NC_012233 225548778
20 Borrelia burgdorferi 118a 118a_lp32-3 NC_012229 225621562
21 Borrelia burgdorferi 118a 118a_lp36 NC_012245 225573901
22 Borrelia burgdorferi 118a 118a_lp38 NC_012232 225621634
23 Borrelia burgdorferi 118a 118a_lp54 NC_012241 225571702
24 Borrelia burgdorferi 156a 156a_cp26 NC_011853 219723247
25 Borrelia burgdorferi 156a 156a_cp32-1 NC_011846 219723010
26 Borrelia burgdorferi 156a 156a_cp32-11 NC_011850 219723162
27 Borrelia burgdorferi 156a 156a_cp32-12 NC_011841 219869942
28 Borrelia burgdorferi 156a 156a_cp32-3 NC_011851 219723204
29 Borrelia burgdorferi 156a 156a_cp32-4 NC_011849 219723117
30 Borrelia burgdorferi 156a 156a_cp32-6 NC_011843 219722940
31 Borrelia burgdorferi 156a 156a_cp32-7 NC_011845 219870062
32 Borrelia burgdorferi 156a 156a_cp32-8 NC_011847 219723030
33 Borrelia burgdorferi 156a 156a_lp17 NC_011865 219872619
34 Borrelia burgdorferi 156a 156a_lp25 NC_011863 219872598
35 Borrelia burgdorferi 156a 156a_lp28-1 NC_011864 219723614
36 Borrelia burgdorferi 156a 156a_lp28-3 NC_011874 219787826
37 Borrelia burgdorferi 156a 156a_lp28-4 NC_011862 219872568
38 Borrelia burgdorferi 156a 156a_lp28-5 NC_011866 219724123
39 Borrelia burgdorferi 156a 156a_lp28-6 NC_011872 219786705
40 Borrelia burgdorferi 156a 156a_lp36 NC_011870 219873279
41 Borrelia burgdorferi 156a 156a_lp38 NC_011868 219873154
42 Borrelia burgdorferi 156a 156a_lp54 NC_011876 219807266
43 Borrelia burgdorferi 297 297_lp54 NC_013128 256041893
44 Borrelia burgdorferi 29805 29805_cp26 NC_012513 226246796
45 Borrelia burgdorferi 29805 29805_cp32-12 NC_012516 226246913
46 Borrelia burgdorferi 29805 29805_cp32-4 NC_012511 226246726
47 Borrelia burgdorferi 29805 29805_cp32-5 NC_012517 226315791
48 Borrelia burgdorferi 29805 29805_cp32-7 NC_012514 226246825
49 Borrelia burgdorferi 29805 29805_cp32-9 NC_012510 226315743
50 Borrelia burgdorferi 29805 29805_lp17 NC_012500 226315638
51 Borrelia burgdorferi 29805 29805_lp25 NC_012503 226234710
52 Borrelia burgdorferi 29805 29805_lp28-2 NC_012502 226315656
53 Borrelia burgdorferi 29805 29805_lp28-3 NC_012507 226246490
54 Borrelia burgdorferi 29805 29805_lp28-4 NC_012501 226234403
55 Borrelia burgdorferi 29805 29805_lp28-6 NC_012495 226234339
56 Borrelia burgdorferi 29805 29805_lp36 NC_012498 226315596
57 Borrelia burgdorferi 29805 29805_lp38 NC_012508 226315693
58 Borrelia burgdorferi 29805 29805_lp54 NC_012505 226246402
59 Borrelia burgdorferi 64b 64b_cp26 NC_012104 223987644
60 Borrelia burgdorferi 64b 64b_cp32-1 NC_012110 224022638
61 Borrelia burgdorferi 64b 64b_cp32-11 NC_012112 224022856
62 Borrelia burgdorferi 64b 64b_cp32-3-8 NC_012106 223987672
63 Borrelia burgdorferi 64b 64b_cp32-4 NC_012105 224020419
64 Borrelia burgdorferi 64b 64b_cp32-5 NC_012111 224022812
65 Borrelia burgdorferi 64b 64b_cp32-6 NC_012114 224022940
66 Borrelia burgdorferi 64b 64b_cp32-7 NC_012113 224022898
67 Borrelia burgdorferi 64b 64b_cp32-9 NC_012107 224020464
68 Borrelia burgdorferi 64b 64b_lp17 NC_012179 224796718
69 Borrelia burgdorferi 64b 64b_lp28-1 NC_012168 224984135
70 Borrelia burgdorferi 64b 64b_lp28-2 NC_012196 224985475
71 Borrelia burgdorferi 64b 64b_lp28-3 NC_012163 224796422
72 Borrelia burgdorferi 64b 64b_lp28-4 NC_012165 224983832
73 Borrelia burgdorferi 64b 64b_lp28-5 NC_012174 224796587
74 Borrelia burgdorferi 64b 64b_lp36 NC_012184 224984588
75 Borrelia burgdorferi 64b 64b_lp38 NC_012182 224984485
76 Borrelia burgdorferi 64b 64b_lp54 NC_012199 224797010
77 Borrelia burgdorferi 72a 72a_cp26 NC_011974 221317035
78 Borrelia burgdorferi 72a 72a_cp32-1 NC_011972 221316992
79 Borrelia burgdorferi 72a 72a_cp32-10 NC_011967 221641554
80 Borrelia burgdorferi 72a 72a_cp32-12 NC_011968 221316839
81 Borrelia burgdorferi 72a 72a_cp32-13 NC_011965 221316774
82 Borrelia burgdorferi 72a 72a_cp32-2-7 NC_011970 221316878
83 Borrelia burgdorferi 72a 72a_cp32-3 NC_011966 221316817
84 Borrelia burgdorferi 72a 72a_cp32-5 NC_011975 221642582
85 Borrelia burgdorferi 72a 72a_lp17 NC_012191 224985251
86 Borrelia burgdorferi 72a 72a_lp28-4 NC_012172 224984213
87 Borrelia burgdorferi 72a 72a_lp36 NC_012186 224984782
88 Borrelia burgdorferi 72a 72a_lp38 NC_012201 224985588
89 Borrelia burgdorferi 72a 72a_lp54 NC_012193 224796797
90 Borrelia burgdorferi 94a 94a_cp26 NC_012263 225576221
91 Borrelia burgdorferi 94a 94a_cp32-10 NC_012255 225621996
92 Borrelia burgdorferi 94a 94a_cp32-11 NC_012254 225576069
93 Borrelia burgdorferi 94a 94a_cp32-5 NC_012250 225575853
94 Borrelia burgdorferi 94a 94a_cp32-6 NC_012259 225622088
95 Borrelia burgdorferi 94a 94a_cp32-7 NC_012258 225576122
96 Borrelia burgdorferi 94a 94a_cp9 NC_012269 225578915
97 Borrelia burgdorferi 94a 94a_lp17 NC_012237 225621783
98 Borrelia burgdorferi 94a 94a_lp28-3 NC_012231 225548747
99 Borrelia burgdorferi 94a 94a_lp28-4 NC_012235 225552789
100 Borrelia burgdorferi 94a 94a_lp36 NC_012246 225574035
101 Borrelia burgdorferi 94a 94a_lp54 NC_012244 225573828
102 Borrelia burgdorferi 94a 94a_lp56 NC_012249 225621961
103 Borrelia burgdorferi B31 NC_001318 15594346
104 Borrelia burgdorferi B31 cp26 NC_001903 11497007
105 Borrelia burgdorferi B31 cp32-1 NC_000948 11497060
106 Borrelia burgdorferi B31 cp32-3 NC_000949 11497103
107 Borrelia burgdorferi B31 cp32-4 NC_000950 11497149
108 Borrelia burgdorferi B31 cp32-6 NC_000951 11497193
109 Borrelia burgdorferi B31 cp32-7 NC_000952 11497236
110 Borrelia burgdorferi B31 cp32-8 NC_000953 11497281
111 Borrelia burgdorferi B31 cp32-9 NC_000954 11497325
112 Borrelia burgdorferi B31 cp9 NC_001904 11497048
113 Borrelia burgdorferi B31 lp17 NC_001849 365823332
114 Borrelia burgdorferi B31 lp21 NC_000955 365823329
115 Borrelia burgdorferi B31 lp25 NC_001850 11496607
116 Borrelia burgdorferi B31 lp28-1 NC_001851 365823337
117 Borrelia burgdorferi B31 lp28-2 NC_001852 11496664
118 Borrelia burgdorferi B31 lp28-3 NC_001853 11496697
119 Borrelia burgdorferi B31 lp28-4 NC_001854 11496735
120 Borrelia burgdorferi B31 lp36 NC_001855 11496779
121 Borrelia burgdorferi B31 lp38 NC_001856 11496831
122 Borrelia burgdorferi B31 lp5 NC_000957 11497445
123 Borrelia burgdorferi B31 lp54 NC_001857 365823346
124 Borrelia burgdorferi B31 lp56 NC_000956 11497372
125 Borrelia burgdorferi Bol26 Bol26_cp26 NC_012512 226246769
126 Borrelia burgdorferi Bol26 Bol26_cp32-12 NC_012518 226315826
127 Borrelia burgdorferi Bol26 Bol26_cp32-5 NC_012509 226246684
128 Borrelia burgdorferi Bol26 Bol26_cp32-9 NC_012515 226246867
129 Borrelia burgdorferi Bol26 Bol26_lp17 NC_012506 226246472
130 Borrelia burgdorferi Bol26 Bol26_lp28-1 NC_012494 226234306
131 Borrelia burgdorferi Bol26 Bol26_lp28-3 NC_012497 226315579
132 Borrelia burgdorferi Bol26 Bol26_lp28-4 NC_012499 226234374
133 Borrelia burgdorferi Bol26 Bol26_lp36 NC_012496 226315535
134 Borrelia burgdorferi Bol26 Bol26_lp54 NC_012504 226234833
135 Borrelia burgdorferi CA-11.2a CA-11.2A_cp26 NC_012157 224593637
136 Borrelia burgdorferi CA-11.2a CA-11.2A_cp32-1 NC_012158 224593666
137 Borrelia burgdorferi CA-11.2a CA-11.2A_cp32-10 NC_012152 224591472
138 Borrelia burgdorferi CA-11.2a CA-11.2A_cp32-13 NC_012156 224593595
139 Borrelia burgdorferi CA-11.2a CA-11.2A_cp32-3 NC_012154 224591544
140 Borrelia burgdorferi CA-11.2a CA-11.2A_cp32-5 NC_012149 224590692
141 Borrelia burgdorferi CA-11.2a CA-11.2A_lp17 NC_012227 225380155
142 Borrelia burgdorferi CA-11.2a CA-11.2A_lp28-3 NC_012228 225380186
143 Borrelia burgdorferi CA-11.2a CA-11.2A_lp36-28-4 NC_012202 224985625
144 Borrelia burgdorferi CA-11.2a CA-11.2A_lp38 NC_012170 224984172
145 Borrelia burgdorferi CA-11.2a CA-11.2A_lp54 NC_012194 224796867
146 Borrelia burgdorferi CA-11.2a CA-11.2A_lp56 NC_012203 224797079
147 Borrelia burgdorferi JD1 NC_017403 387825662
148 Borrelia burgdorferi JD1 JD1 cp26 NC_017395 387825554
149 Borrelia burgdorferi JD1 JD1 cp32-1+5 NC_017394 387825484
150 Borrelia burgdorferi JD1 JD1 cp32-10 NC_017428 387826681
151 Borrelia burgdorferi JD1 JD1 cp32-11 NC_017393 387825444
152 Borrelia burgdorferi JD1 JD1 cp32-12 NC_017396 387825581
153 Borrelia burgdorferi JD1 JD1 cp32-3 NC_017427 387826639
154 Borrelia burgdorferi JD1 JD1 cp32-6 NC_017425 387826553
155 Borrelia burgdorferi JD1 JD1 cp32-8 NC_017426 387826596
156 Borrelia burgdorferi JD1 JD1 cp32-9 NC_017397 387825622
157 Borrelia burgdorferi JD1 JD1 lp17 NC_017410 387826736
158 Borrelia burgdorferi JD1 JD1 lp25 NC_017409 387826517
159 Borrelia burgdorferi JD1 JD1 lp28-1 NC_017404 387826782
160 Borrelia burgdorferi JD1 JD1 lp28-3 NC_017405 387826795
161 Borrelia burgdorferi JD1 JD1 lp28-4 NC_017407 387826817
162 Borrelia burgdorferi JD1 JD1 lp28-5 NC_017406 387826721
163 Borrelia burgdorferi JD1 JD1 lp28-6 NC_017408 387826486
164 Borrelia burgdorferi JD1 JD1 lp28-7 NC_017412 387826748
165 Borrelia burgdorferi JD1 JD1 lp36 NC_017411 387826840
166 Borrelia burgdorferi JD1 JD1 lp38 NC_017413 387826532
167 Borrelia burgdorferi JD1 JD1_lp54 NC_013129 256041951
168 Borrelia burgdorferi N40 NC_017418 387826928
169 Borrelia burgdorferi N40 N40_cp26 NC_017401 387827984
170 Borrelia burgdorferi N40 N40_cp32-10 NC_017424 387827798
171 Borrelia burgdorferi N40 N40_cp32-12 NC_017423 387827926
172 Borrelia burgdorferi N40 N40_cp32-4 NC_017400 387827965
173 Borrelia burgdorferi N40 N40_cp32-5 NC_017398 387826859
174 Borrelia burgdorferi N40 N40_cp32-7 NC_017422 387827903
175 Borrelia burgdorferi N40 N40_cp32-9 NC_017402 387827867
176 Borrelia burgdorferi N40 N40_cp9 NC_017399 387826896
177 Borrelia burgdorferi N40 N40_lp17 NC_017417 387827839
178 Borrelia burgdorferi N40 N40_lp25 NC_017420 387827856
179 Borrelia burgdorferi N40 N40_lp28-2 NC_017419 387827738
180 Borrelia burgdorferi N40 N40_lp28-4 NC_017416 387828029
181 Borrelia burgdorferi N40 N40_lp28-5 NC_017415 387828011
182 Borrelia burgdorferi N40 N40_lp36 NC_017414 387826906
183 Borrelia burgdorferi N40 N40_lp38 NC_017421 387827769
184 Borrelia burgdorferi N40 N40_lp54 NC_013130 256055273
185 Borrelia burgdorferi WI91-23 WI91-23_cp26 NC_012151 224591444
186 Borrelia burgdorferi WI91-23 WI91-23_cp32-1 NC_012148 224590649
187 Borrelia burgdorferi WI91-23 WI91-23_cp32-10 NC_012159 224593710
188 Borrelia burgdorferi WI91-23 WI91-23_cp32-11 NC_012150 224590735
189 Borrelia burgdorferi WI91-23 WI91-23_cp32-4 NC_012162 224611703
190 Borrelia burgdorferi WI91-23 WI91-23_cp32-5 NC_012153 224591517
191 Borrelia burgdorferi WI91-23 WI91-23_cp32-6 NC_012160 224983743
192 Borrelia burgdorferi WI91-23 WI91-23_cp32-7 NC_012161 224983786
193 Borrelia burgdorferi WI91-23 WI91-23_cp9-3 NC_012155 224591586
194 Borrelia burgdorferi WI91-23 WI91-23_lp17 NC_012188 224796770
195 Borrelia burgdorferi WI91-23 WI91-23_lp25 NC_012178 224796681
196 Borrelia burgdorferi WI91-23 WI91-23_lp28-1 NC_012197 224985524
197 Borrelia burgdorferi WI91-23 WI91-23_lp28-3 NC_012171 224796548
198 Borrelia burgdorferi WI91-23 WI91-23_lp28-4 NC_012187 224984815
199 Borrelia burgdorferi WI91-23 WI91-23_lp28-6 NC_012195 224796939
200 Borrelia burgdorferi WI91-23 WI91-23_lp36 NC_012189 224984853
201 Borrelia burgdorferi WI91-23 WI91-23_lp38 NC_012167 224984072
202 Borrelia burgdorferi WI91-23 WI91-23_lp5 NC_012192 224796790
203 Borrelia burgdorferi WI91-23 WI91-23_lp54 NC_012175 224796611
204 Borrelia burgdorferi WI91-23 WI91-23_lp56 NC_012198 224796975
205 Borrelia burgdorferi ZS7 NC_011728 218249165
206 Borrelia burgdorferi ZS7 ZS7_cp26 NC_011724 218203978
207 Borrelia burgdorferi ZS7 ZS7_cp32-1 NC_011731 218442268
208 Borrelia burgdorferi ZS7 ZS7_cp32-12 NC_011735 218442354
209 Borrelia burgdorferi ZS7 ZS7_cp32-3+10 NC_011720 218202726
210 Borrelia burgdorferi ZS7 ZS7_cp32-4 NC_011736 218442394
211 Borrelia burgdorferi ZS7 ZS7_cp32-9 NC_011722 218203897
212 Borrelia burgdorferi ZS7 ZS7_lp17 NC_011782 218875581
213 Borrelia burgdorferi ZS7 ZS7_lp25 NC_011783 219405371
214 Borrelia burgdorferi ZS7 ZS7_lp28-1 NC_011780 218875340
215 Borrelia burgdorferi ZS7 ZS7_lp28-2 NC_011779 218868768
216 Borrelia burgdorferi ZS7 ZS7_lp28-3 NC_011781 218875456
217 Borrelia burgdorferi ZS7 ZS7_lp28-4 NC_011785 218906779
218 Borrelia burgdorferi ZS7 ZS7_lp36 NC_011778 218868668
219 Borrelia burgdorferi ZS7 ZS7_lp54 NC_011784 219499124
11 Brucella 1 Brucella abortus A13334 1 NC_016795 376271796
2 Brucella abortus A13334 2 NC_016777 376270416
3 Brucella abortus bv. 1 str. 9-941 I NC_006932 62288991 ntba06
4 Brucella abortus bv. 1 str. 9-941 II NC_006933 62316961 ntba06
5 Brucella abortus S19 1 NC_010742 189023268
6 Brucella abortus S19 2 NC_010740 189022234
7 Brucella canis ATCC 23365 I NC_010103 161617991
8 Brucella canis ATCC 23365 II NC_010104 161620094
9 Brucella canis HSK A52141 1 NC_016778 376274175
10 Brucella canis HSK A52141 2 NC_016796 376276498
11 Brucella melitensis 16M I NC_003317 17986284 ntbm01
12 Brucella melitensis 16M II NC_003318 17988344 ntbm01
13 Brucella melitensis ATCC 23457 I NC_012441 225851546
14 Brucella melitensis ATCC 23457 II NC_012442 225685871
15 Brucella melitensis biovar Abortus 2308 I NC_007618 82698932 ntbm02
16 Brucella melitensis biovar Abortus 2308 II NC_007624 83268957 ntbm02
17 Brucella melitensis M28 1 NC_017244 384407464
18 Brucella melitensis M28 2 NC_017245 384409638
19 Brucella melitensis M5-90 I NC_017246 384210366
20 Brucella melitensis M5-90 II NC_017247 384212538
21 Brucella melitensis NI I NC_017248 384444089
22 Brucella melitensis NI II NC_017283 384446171
23 Brucella microti CCM 4915 1 NC_013119 256368465
24 Brucella microti CCM 4915 2 NC_013118 256014795
25 Brucella ovis ATCC 25840 I NC_009505 148558820
26 Brucella ovis ATCC 25840 II NC_009504 148557829
27 Brucella pinnipedialis B2/94 1 NC_015857 340789630
28 Brucella pinnipedialis B2/94 2 NC_015858 340791767
29 Brucella suis 1330 I NC_004310 56968325 gbr
30 Brucella suis 1330 I NC_017251 384223698
31 Brucella suis 1330 II NC_004311 56968493 gbr
32 Brucella suis 1330 II NC_017250 384222553
33 Brucella suis ATCC 23445 I NC_010169 163842277
34 Brucella suis ATCC 23445 II NC_010167 163844199
35 Brucella suis VBI22 I NC_016797 376279704
36 Brucella suis VBI22 II NC_016775 376277991
12 Burkholderia mallei 1 Burkholderia mallei NR_041725 343201038
2 Burkholderia mallei ATCC 23344 1 NC_006348 53723370 gbm
3 Burkholderia mallei ATCC 23344 2 NC_006349 77358719 gbm
4 Burkholderia mallei NCTC 10229 I NC_008836 124383319
5 Burkholderia mallei NCTC 10229 II NC_008835 124381141
6 Burkholderia mallei NCTC 10247 I NC_009080 126447966
7 Burkholderia mallei NCTC 10247 II NC_009079 126445587
8 Burkholderia mallei SAVP1 I NC_008785 121598179
9 Burkholderia mallei SAVP1 II NC_008784 121596444
13 Burkholderia pseudomallei 1 Burkholderia pseudomallei 1026b 1 NC_017831 386860126
2 Burkholderia pseudomallei 1026b 2 NC_017832 386863735
3 Burkholderia pseudomallei 1106a I NC_009076 126451443
4 Burkholderia pseudomallei 1106a II NC_009078 126455463
5 Burkholderia pseudomallei 1710b I NC_007434 76808520 gbp1710b
6 Burkholderia pseudomallei 1710b II NC_007435 76817237 gbp1710b
7 Burkholderia pseudomallei 668 I NC_009074 126438353
8 Burkholderia pseudomallei 668 II NC_009075 126442307
9 Burkholderia pseudomallei K96243 1 NC_006350 53717639 ntbp01
10 Burkholderia pseudomallei K96243 2 NC_006351 53721039 ntbp01
11 Burkholderia pseudomallei MSHR346 I NC_012695 237810278
14 Campylobacter jejuni 1 Campylobacter jejuni pCJ01 NC_008438 115534241
2 Campylobacter jejuni pCJ1170 NC_008052 104772061
3 Campylobacter jejuni pCJ419 NC_004997 32469820
4 Campylobacter jejuni RM1221 NC_003912 57236892 gcj
5 Campylobacter jejuni subsp. doylei 269.97 NC_009707 153950938
6 Campylobacter jejuni subsp. jejuni 81-176 NC_008787 121612099
7 Campylobacter jejuni subsp. jejuni 81-176 pTet NC_007141 68164394
8 Campylobacter jejuni subsp. jejuni 81-176 pTet NC_006135 51209513
9 Campylobacter jejuni subsp. jejuni 81-176 pTet NC_008790 121999251
10 Campylobacter jejuni subsp. jejuni 81-176 pVir NC_005012 32469825
11 Campylobacter jejuni subsp. jejuni 81-176 pVir NC_008770 121582657
12 Campylobacter jejuni subsp. jejuni 81116 NC_009839 157414322
13 Campylobacter jejuni subsp. jejuni IA3902 NC_017279 384447320
14 Campylobacter jejuni subsp. jejuni IA3902 pVir NC_017284 384448934
15 Campylobacter jejuni subsp. jejuni ICDCCJ07001 NC_014802 315123616
16 Campylobacter jejuni subsp. jejuni ICDCCJ07001 pTet NC_014801 315123578
17 Campylobacter jejuni subsp. jejuni M1 NC_017280 384440681
18 Campylobacter jejuni subsp. jejuni NCTC 11168 NC_002163 15791399 ntcj01
19 Campylobacter jejuni subsp. jejuni S3 NC_017281 384442354
20 Campylobacter jejuni subsp. jejuni S3 pTet NC_017282 384442304
15 Chlamydia muridarum 1 Chlamydia muridarum NR_036835 310974971
2 Chlamydia muridarum Nigg NC_002620 29337300
3 Chlamydia muridarum Nigg pMoPn NC_002182 10957566
16 Chlamydia trachomatis 1 385245895
2 Chlamydia trachomatis NR_025888 219846298
3 Chlamydia trachomatis pCTB NC_012627 228298843
4 Chlamydia trachomatis pL2 NC_010285 166153431
5 Chlamydia trachomatis pLGV440 NC_010029 294509202
6 Chlamydia trachomatis pSW2 NC_012630 228404341
7 Chlamydia trachomatis pSW3 NC_012631 228404350
8 Chlamydia trachomatis pSW4 NC_012625 228292900
9 Chlamydia trachomatis pSW5 NC_012626 228298555
10 Chlamydia trachomatis pUCH-1 NC_010286 166091528
11 Chlamydia trachomatis 434/Bu NC_010287 166153973
12 Chlamydia trachomatis A/HAR-13 NC_007429 76788711
13 Chlamydia trachomatis A/HAR-13 pCTA NC_007430 76789623
14 Chlamydia trachomatis A2497 NC_016798 376282008
15 Chlamydia trachomatis A2497 NC_017437 385269641
16 Chlamydia trachomatis A2497 Plasmid0001 NC_017438 385270623
17 Chlamydia trachomatis B/Jali20/OT NC_012686 237802433
18 Chlamydia trachomatis B/Jali20/OT pJALI NC_012629 228301246
19 Chlamydia trachomatis B/TZ1A828/OT NC_012687 237804348
20 Chlamydia trachomatis D-EC NC_017434 385243207
21 Chlamydia trachomatis D-EC pCTDEC1 NC_017435 385244078
22 Chlamydia trachomatis D-LC NC_017436 385244087
23 Chlamydia trachomatis D-LC pCTDLC1 NC_017433 385244958
24 Chlamydia trachomatis D/UW-3/CX NC_000117 15604717
25 Chlamydia trachomatis E/11023 NC_017431 385241358
26 Chlamydia trachomatis E/150 NC_017439 385244967
27 Chlamydia trachomatis E/SW3 NC_017952 389858571
28 Chlamydia trachomatis F/SW4 NC_017951 389857697
29 Chlamydia trachomatis F/SW5 NC_017953 389859448
30 Chlamydia trachomatis G/11222 NC_017430 385240430
31 Chlamydia trachomatis G/9301 NC_017432 385242285
32 Chlamydia trachomatis G/9768 NC_017429 385239509
33 Chlamydia trachomatis L2b/UCH-1/proctitis NC_010280 352951305
34 Chlamydia trachomatis L2c NC_015744 339625373
35 Chlamydia trachomatis Sweden2 NC_017441 386262357
17 Chlamydophila abortus 1 Chlamydophila abortus NR_036834 310974970
2 Chlamydophila abortus S26/3 NC_004552 62184647
18 Chlamydophila pneumoniae 1 Chlamydophila pneumoniae AR39 NC_002179 58021288
2 Chlamydophila pneumoniae CWL029 NC_000922 15617929
3 Chlamydophila pneumoniae J138 NC_002491 15835535
4 Chlamydophila pneumoniae LPCoLN NC_017285 384448988
5 Chlamydophila pneumoniae LPCoLN unnamed NC_017286 384450086
6 Chlamydophila pneumoniae TW-183 NC_005043 33241335
19 Chlamydophila psittaci 1 Chlamydia psittaci NR_036864 310975000
2 Chlamydophila psittaci pCpA1 NC_002117 10957088
3 Chlamydophila psittaci 01DC11 NC_017289 384451106
4 Chlamydophila psittaci 02DC15 NC_017292 384454035
5 Chlamydophila psittaci 08DC60 NC_017290 384452082
6 Chlamydophila psittaci 6BC NC_015470 332286959
7 Chlamydophila psittaci 6BC NC_017287 384450095
8 Chlamydophila psittaci 6BC p6BC NC_015217 332286950
9 Chlamydophila psittaci 6BC pCps6BC NC_017288 384451098
10 Chlamydophila psittaci C19/98 NC_017291 384453056
11 Chlamydophila psittaci RD1 NC_014796 392376213
20 Clostridium botulinum 1 Clostridium botulinum NR_036786 310974922
2 Clostridium botulinum pC2C203U28 NC_012219 225166733
3 Clostridium botulinum A str. ATCC 19397 NC_009697 153930785
4 Clostridium botulinum A str. ATCC 3502 NC_009495 148378011
5 Clostridium botulinum A str. ATCC 3502 pBOT3502 NC_009496 148381586
6 Clostridium botulinum A str. Hall NC_009698 153934468
7 Clostridium botulinum A2 str. Kyoto NC_012563 226947222
8 Clostridium botulinum A3 str. Loch Maree NC_010520 170758191
9 Clostridium botulinum A3 str. Loch Maree pCLK NC_010418 169834729
10 Clostridium botulinum B str. Eklund 17B NC_010674 187932320
11 Clostridium botulinum B str. Eklund 17B pCLL NC_010680 187935795
12 Clostridium botulinum B1 str. Okra NC_010516 170754211
13 Clostridium botulinum B1 str. Okra pCLD NC_010379 169834533
14 Clostridium botulinum Ba4 str. 657 NC_012658 237793320
15 Clostridium botulinum Ba4 str. 657 pCLJ NC_012654 229587271
16 Clostridium botulinum Ba4 str. 657 pCLJ2 NC_012657 229599876
17 Clostridium botulinum BKT015925 NC_015425 331268188
18 Clostridium botulinum BKT015925 p1BKT015925 NC_015417 331270865
19 Clostridium botulinum BKT015925 p2BKT015925 NC_015426 331270761
20 Clostridium botulinum BKT015925 p3BKT015925 NC_015418 331271088
21 Clostridium botulinum BKT015925 p4BKT015925 NC_015427 331270707
22 Clostridium botulinum BKT015925 p5BKT015925 NC_015419 331268174
23 Clostridium botulinum D str. 1873 pCLG1 NC_012946 253771310
24 Clostridium botulinum D str. 1873 pCLG2 NC_012945 253771260
25 Clostridium botulinum E3 str. Alaska E43 NC_010723 188587536
26 Clostridium botulinum F str. 230613 NC_017297 384460459
27 Clostridium botulinum F str. 230613 pCBF NC_017298 384463962
28 Clostridium botulinum F str. Langeland NC_009699 153937894
29 Clostridium botulinum F str. Langeland pCLI NC_009700 153941546
30 Clostridium botulinum H04402 065 NC_017299 387816237
21 Clostridium difficile 1 Clostridium difficile pCD6 NC_005326 41057060
2 Clostridium difficile 2007855 NC_017178 383843666
3 Clostridium difficile 630 NC_009089 126697566
4 Clostridium difficile 630 pCD630 NC_008226 110666922
5 Clostridium difficile BI1 NC_017177 383843668
6 Clostridium difficile BI1 NC_017179 383843669
7 Clostridium difficile BI1 pCDBI1 NC_017176 383843667
8 Clostridium difficile CD196 NC_013315 260681769
9 Clostridium difficile CF5 NC_017173 383843664
10 Clostridium difficile M120 NC_017174 383843665
11 Clostridium difficile R20291 NC_013316 260685375
22 Clostridium perfringens 1 Clostridium perfringens pBCNF5603 NC_006872 60677300
2 Clostridium perfringens pCP8533etx NC_011412 209947580
3 Clostridium perfringens pCPF5603 NC_007773 86559604
4 Clostridium perfringens pCPPB-1 NC_015712 338814987
5 Clostridium perfringens pCW3 NC_010937 190015736
6 Clostridium perfringens ATCC 13124 NC_008261 110798562
7 Clostridium perfringens CPE str. F4969 pCPF4969 NC_007772 86559543
8 Clostridium perfringens SM101 NC_008262 110801439
9 Clostridium perfringens SM101 1 NC_008263 110803998
10 Clostridium perfringens SM101 2 NC_008264 110804009
11 Clostridium perfringens str. 13 NC_003366 18308982 ntcp03
12 Clostridium perfringens str. 13 pCP13 NC_003042 15081479 ntcp03
13 Plasmid pIP404 pIP404 NC_001388 9507357
23 Clostridium tetani 1 Clostridium tetani E88 NC_004557 28209834
2 Clostridium tetani E88 pE88 NC_004565 28373131
24 Corynebacterium diphtheriae 1 Corynebacterium diphtheriae pNG2 NC_005001 32470491
2 Corynebacterium diphtheriae pNGA2 NC_003239 17158057
3 Corynebacterium diphtheriae 241 NC_016782 375289729
4 Corynebacterium diphtheriae 31A NC_016799 376283503
5 Corynebacterium diphtheriae BH8 NC_016800 376286528
6 Corynebacterium diphtheriae C7 (beta) NC_016801 376289208
7 Corynebacterium diphtheriae CDCE 8392 NC_016785 376241700
8 Corynebacterium diphtheriae HC01 NC_016786 376244562
9 Corynebacterium diphtheriae HC02 NC_016802 376292118
10 Corynebacterium diphtheriae HC03 NC_016787 376250168
11 Corynebacterium diphtheriae HC04 NC_016788 376247367
12 Corynebacterium diphtheriae INCA 402 NC_016783 375291975
13 Corynebacterium diphtheriae NCTC 13129 NC_002935 38232642
14 Corynebacterium diphtheriae PW8 NC_016789 376253128
15 Corynebacterium diphtheriae VA01 NC_016790 376256018
25 Coxiella burnetii 1 Coxiella burnetii QpDV NC_002131 10956020
2 Coxiella burnetii QpH1 NC_002118 10955982
3 Coxiella burnetii 'MSU Goat Q177' QpRS NC_010258 165905640
4 Coxiella burnetii CbuG_Q212 NC_011527 212211668
5 Coxiella burnetii CbuK_Q154 NC_011528 212217688
6 Coxiella burnetii CbuK_Q154 pQpRS_K_Q154 NC_011526 212208405
7 Coxiella burnetii Dugway 5J108-111 NC_009727 154705721
8 Coxiella burnetii Dugway 5J108-111 pQpDG NC_009726 154688247
9 Coxiella burnetii RSA 331 NC_010117 161829703
10 Coxiella burnetii RSA 331 QpH1 NC_010115 161789063
11 Coxiella burnetii RSA 493 NC_002971 77358712 gcb
12 Coxiella burnetii RSA 493 pQpH1 NC_004704 29648114 gcb
26 Enterococcus faecalis 1 Enterococcus faecalis NC_006372 54307156
2 Enterococcus faecalis pAM373 NC_002630 11968208
3 Enterococcus faecalis pAMalpha1 NC_005013 32470448
4 Enterococcus faecalis pAMbeta1 NC_013514 269124235
5 Enterococcus faecalis pBEE99 NC_013533 270208272
6 Enterococcus faecalis pCF10 NC_006827 113706804
7 Enterococcus faecalis pEF-01 NC_014508 332555882
8 Enterococcus faecalis pEF1071 NC_005010 32470438
9 Enterococcus faecalis pMG2200 NC_011642 217388333
10 Enterococcus faecalis pRE25 NC_008445 115534802
11 Enterococcus faecalis pTW9 NC_014726 313247774
12 Enterococcus faecalis pWZ1668 NC_014475 305678685
13 Enterococcus faecalis 62 NC_017312 384516725
14 Enterococcus faecalis 62 EF62pA NC_017314 384519687
15 Enterococcus faecalis 62 EF62pB NC_017313 384519623
16 Enterococcus faecalis 62 EF62pC NC_017315 384519696
17 Enterococcus faecalis D32 NC_018221 397698583
18 Enterococcus faecalis D32 EFD32pA NC_018222 397698492
19 Enterococcus faecalis D32 EFD32pB NC_018223 397698507
20 Enterococcus faecalis OG1RF NC_017316 384511964
21 Enterococcus faecalis V583 NC_004668 29374661
22 Enterococcus faecalis V583 pTEF1 NC_004669 29377803
23 Enterococcus faecalis V583 pTEF2 NC_004671 29377895
24 Enterococcus faecalis V583 pTEF3 NC_004670 29377876
27 Escherichia coli 1 Escherichia coli CloDF13 NC_002119 10955253
2 Escherichia coli ColE9-J NC_011977 222098966
3 Escherichia coli IncN plasmid N3 NC_015599 336053193
4 Escherichia coli IncQ-type pQ7 NC_014356 302035313
5 Escherichia coli MccC7-H22 NC_010257 165975395
6 Escherichia coli NR1 NC_009133 133756440
7 Escherichia coli p1658/97 NC_004998 32469973
8 Escherichia coli p271A NC_015872 342162630
9 Escherichia coli p3521 NC_014843 317054589
10 Escherichia coli p5217 NC_011799 219372367
11 Escherichia coli p6148 NC_011795 219372021
12 Escherichia coli p9123 NC_005324 41056918
13 Escherichia coli p9705 NC_008444 115534260
14 Escherichia coli pAPEC-1 NC_011980 222104788
15 Escherichia coli pAPEC-O103-ColBM NC_011964 221218504
16 Escherichia coli pAPEC-O2-ColV NC_007675 84060731
17 Escherichia coli pAPEC-O2-R NC_006671 58000284
18 Escherichia coli pAR060302 NC_012692 237809907
19 Escherichia coli pB171 NC_002142 10955350
20 Escherichia coli pBHRK18 NC_005568 42761411
21 Escherichia coli pBHRK19 NC_005569 42761416
22 Escherichia coli pC15-1a NC_005327 41056927
23 Escherichia coli pCA4 NC_003435 19387559
24 Escherichia coli pCol-let NC_002487 10955434
25 Escherichia coli pColE1-H22 NC_013589 270312296
26 Escherichia coli pColE8 NC_012882 242347931
27 Escherichia coli pColG NC_010904 190570387
28 Escherichia coli pColK-K235 NC_006881 61965911
29 Escherichia coli pCoo NC_007635 83404799
30 Escherichia coli pCT NC_014477 305667788
31 Escherichia coli pEC14-9 NC_013782 288551643
32 Escherichia coli pEC14_114 NC_013175 256855249
33 Escherichia coli pEC278 NC_011418 209947788
34 Escherichia coli pEC904 NC_011417 209921943
35 Escherichia coli pECO29 NC_001537 10955250
36 Escherichia coli pECTm80 NC_015472 332157607
37 Escherichia coli pEC_B24 NC_014382 302595284
38 Escherichia coli pEC_Bactec NC_014383 302651671
39 Escherichia coli pEC_L46 NC_014385 302595338
40 Escherichia coli pEC_L8 NC_014384 302595465
41 Escherichia coli peH4H NC_012690 237640188
42 Escherichia coli pEK204 NC_013120 256367532
43 Escherichia coli pEK499 NC_013122 256367708
44 Escherichia coli pEK516 NC_013121 256367628
45 Escherichia coli pETN48 NC_014615 310286349
46 Escherichia coli pFL129 NC_005923 49176951
47 Escherichia coli pHK17a NC_016039 348589192
48 Escherichia coli pIGAL1 NC_005248 38638184
49 Escherichia coli pIGJC156 NC_009781 156978327
50 Escherichia coli pIGMS5 NC_010883 190410160
51 Escherichia coli pIGRW12 NC_010898 190570380
52 Escherichia coli pIGWZ12 NC_010885 190410166
53 Escherichia coli pIS2 NC_004429 25592039
54 Escherichia coli pKC394 NC_014231 298206535
55 Escherichia coli pKL1 NC_002145 10955436
56 Escherichia coli pLEW517 NC_009132 133756175
57 Escherichia coli pLEW517 NC_009131 133755324
58 Escherichia coli pLG13 NC_005019 32470115
59 Escherichia coli pLMO226 NC_010064 161598463
60 Escherichia coli pMAR7 NC_010862 190014865
61 Escherichia coli pMAS2027 NC_013503 268318460
62 Escherichia coli pMG828-1 NC_008486 116256154
63 Escherichia coli pMG828-2 NC_008487 116256156
64 Escherichia coli pMG828-3 NC_008488 116256159
65 Escherichia coli pMG828-4 NC_008489 116256179
66 Escherichia coli pMG828-5 NC_008490 116256190
67 Escherichia coli pMM200 NC_010101 161612311
68 Escherichia coli pMM234 NC_010100 161612310
69 Escherichia coli pMUR050 NC_007682 116536719
70 Escherichia coli pO113 NC_007365 73853177
71 Escherichia coli pO26-S1 NC_011266 204309811
72 Escherichia coli pO26-S3 NC_011227 204309813
73 Escherichia coli pO26-S4 NC_011228 204309817
74 Escherichia coli pO26-Vir NC_012487 226200948
75 Escherichia coli pO26I NC_011812 219586047
76 Escherichia coli pO86A1 NC_008460 116006783
77 Escherichia coli pOLA52 NC_010378 169302998
78 Escherichia coli pPM18 NC_013652 281485108
79 Escherichia coli pRAx NC_012886 242348096
80 Escherichia coli pRK2 NC_005970 50233940
81 Escherichia coli pSFO157 NC_009602 149930749
82 Escherichia coli pSP70 NC_010731 189009161
83 Escherichia coli pTN38148 NC_011514 211909952
84 Escherichia coli pVI678 NC_008597 118480566
85 Escherichia coli pVM01 NC_010409 169546410
86 Escherichia coli R721 NC_002525 10955438
87 Escherichia coli 042 NC_017626 387605479
88 Escherichia coli 042 pAA NC_017627 387604868
89 Escherichia coli 1520 pIP1206 NC_010558 187736741
90 Escherichia coli 536 NC_008253 110640213
91 Escherichia coli 53638 p53638_226 NC_010719 188573899
92 Escherichia coli 53638 p53638_75 NC_010720 188574176
93 Escherichia coli 55989 NC_011748 218693476
94 Escherichia coli 55989 55989p NC_011752 218511148
95 Escherichia coli ABU 83972 NC_017631 386637352
96 Escherichia coli ABU 83972 pABU NC_017629 386637348
97 Escherichia coli APEC O1 NC_008563 117622295
98 Escherichia coli APEC O1 pAPEC-O1-ColBM NC_009837 157418083
99 Escherichia coli APEC O1 pAPEC-O1-R NC_009838 157412014
100 Escherichia coli ATCC 8739 NC_010468 170018061
101 Escherichia coli B str. REL606 NC_012967 254160123
102 Escherichia coli BL21(DE3) NC_012947 253771435
103 Escherichia coli BL21(DE3) NC_012892 387823261
104 Escherichia coli BL21(DE3) NC_012971 387825439
105 Escherichia coli BW2952 NC_012759 238899406
106 Escherichia coli CFT073 NC_004431 26245917 ntec04
107 Escherichia coli DH1 NC_017638 387619774
108 Escherichia coli DH1 NC_017625 386593590
109 Escherichia coli E24377A NC_009801 157154711
110 Escherichia coli E24377A pETEC_35 NC_009787 157149399
111 Escherichia coli E24377A pETEC_5 NC_009791 157149574
112 Escherichia coli E24377A pETEC_6 NC_009789 157149498
113 Escherichia coli E24377A pETEC_73 NC_009788 157149429
114 Escherichia coli E24377A pETEC_74 NC_009790 157149504
115 Escherichia coli E24377A pETEC_80 NC_009786 157149330
116 Escherichia coli ED1a NC_011745 218687878
117 Escherichia coli ED1a pECOED NC_011754 218711035
118 Escherichia coli ETEC 1392/75 p1081 NC_014232 298206425
119 Escherichia coli ETEC 1392/75 p557 NC_014233 298155810
120 Escherichia coli ETEC 1392/75 p746 NC_014234 299836120
121 Escherichia coli ETEC 1392/75 p75 NC_014235 298111016
122 Escherichia coli ETEC H10407 NC_017633 387610477
123 Escherichia coli ETEC H10407 p52 NC_017721 387615175
124 Escherichia coli ETEC H10407 p58 NC_017723 387615182
125 Escherichia coli ETEC H10407 p666 NC_017722 387610311
126 Escherichia coli ETEC H10407 p948 NC_017724 387610385
127 Escherichia coli ETEC H10407 pEntH10407 NC_013507 268507159
128 Escherichia coli HS NC_009800 157159467
129 Escherichia coli IAI1 NC_011741 218552585
130 Escherichia coli IAI39 NC_011750 218698419
131 Escherichia coli IHE3034 NC_017628 386597751
132 Escherichia coli KO11FL NC_016902 378710836
133 Escherichia coli KO11FL NC_017660 386698504
134 Escherichia coli KO11FL pEKO1101 NC_016904 378715377
135 Escherichia coli KO11FL pEKO1102 NC_016903 378715370
136 Escherichia coli KO11FL pRK2 NC_017661 386703202
137 Escherichia coli LF82 NC_011993 222154829
138 Escherichia coli LF82 plLF82 NC_011917 221630420
139 Escherichia coli NA114 NC_017644 386617516
140 Escherichia coli O103:H2 str. 12009 NC_013353 260842239
141 Escherichia coli O103:H2 str. 12009 pO103 NC_013354 260718930
142 Escherichia coli O111:H- str. 11128 NC_013364 260866153
143 Escherichia coli O111:H- str. 11128 pO111_1 NC_013365 260752012
144 Escherichia coli O111:H- str. 11128 pO111_2 NC_013370 260871126
145 Escherichia coli O111:H- str. 11128 pO111_3 NC_013366 260751835
146 Escherichia coli O111:H- str. 11128 pO111_4 NC_013367 260751908
147 Escherichia coli O111:H- str. 11128 pO111_5 NC_013368 260751919
148 Escherichia coli O127:H6 str. E2348/69 NC_011601 215485161
149 Escherichia coli O127:H6 str. E2348/69 pE2348-2 NC_011602 215274578
150 Escherichia coli O127:H6 str. E2348/69 pMAR2 NC_011603 215276192
151 Escherichia coli O157:H7 EDL933 NC_002655 16445223 ntec02
152 Escherichia coli O157:H7 EDL933 pO157 NC_007414 75994447 ntec02
153 Escherichia coli O157:H7 str. EC4115 NC_011353 209395693
154 Escherichia coli O157:H7 str. EC4115 pEC4115 NC_011351 209395638
155 Escherichia coli O157:H7 str. EC4115 pO157 NC_011350 209395529
156 Escherichia coli O157:H7 str. Sakai NC_002695 15829254 ntec03
157 Escherichia coli O157:H7 str. Sakai pO157 NC_002128 10955266 ntec03
158 Escherichia coli O157:H7 str. Sakai pOSAK1 NC_002127 10955262 ntec03
159 Escherichia coli O157:H7 str. TW14359 NC_013008 254791136
160 Escherichia coli O157:H7 str. TW14359 pO157 NC_013010 254667448
161 Escherichia coli O26:H- pO26-CRL NC_013728 284000133
162 Escherichia coli O26:H11 str. 11368 NC_013361 260853213
163 Escherichia coli O26:H11 str. 11368 pO26_1 NC_013369 260763802
164 Escherichia coli O26:H11 str. 11368 pO26_2 NC_013362 260751930
165 Escherichia coli O26:H11 str. 11368 pO26_3 NC_013363 260751828
166 Escherichia coli O26:H11 str. 11368 pO26_4 NC_014543 307950758
167 Escherichia coli O55:H7 str. CB9615 NC_013941 291280824
168 Escherichia coli O55:H7 str. CB9615 pO55 NC_013942 291285839
169 Escherichia coli O55:H7 str. RM12579 NC_017656 387504934
170 Escherichia coli O55:H7 str. RM12579 p12579_1 NC_017653 387504721
171 Escherichia coli O55:H7 str. RM12579 p12579_2 NC_017657 387504844
172 Escherichia coli O55:H7 str. RM12579 p12579_3 NC_017654 387504828
173 Escherichia coli O55:H7 str. RM12579 p12579_4 NC_017658 387504713
174 Escherichia coli O55:H7 str. RM12579 p12579_5 NC_017655 387504924
175 Escherichia coli O7:K1 str. CE10 NC_017646 386622414
176 Escherichia coli O7:K1 str. CE10 pCE10A NC_017647 386627436
177 Escherichia coli O7:K1 str. CE10 pCE10B NC_017648 386627431
178 Escherichia coli O7:K1 str. CE10 pCE10C NC_017649 386622390
179 Escherichia coli O7:K1 str. CE10 pCE10D NC_017650 386622393
180 Escherichia coli O83:H1 str. NRG 857C NC_017634 387615344
181 Escherichia coli O83:H1 str. NRG 857C pO83_CORR NC_017659 387615190
182 Escherichia coli P12b NC_017663 386703215
183 Escherichia coli S88 NC_011742 218556939
184 Escherichia coli S88 pECOS88 NC_011747 218534477
185 Escherichia coli SE11 NC_011415 209917191
186 Escherichia coli SE11 pSE11-1 NC_011419 209921952
187 Escherichia coli SE11 pSE11-2 NC_011413 209916829
188 Escherichia coli SE11 pSE11-3 NC_011416 209921875
189 Escherichia coli SE11 pSE11-4 NC_011407 209916806
190 Escherichia coli SE11 pSE11-5 NC_011408 209916817
191 Escherichia coli SE11 pSE11-6 NC_011411 209916825
192 Escherichia coli SE15 NC_013654 387828053
193 Escherichia coli SE15 pECSF1 NC_013655 281427817
194 Escherichia coli SMS-3-5 NC_010498 170679574
195 Escherichia coli SMS-3-5 pSMS35_130 NC_010488 170650760
196 Escherichia coli SMS-3-5 pSMS35_3 NC_010487 170650756
197 Escherichia coli SMS-3-5 pSMS35_4 NC_010486 170650751
198 Escherichia coli SMS-3-5 pSMS35_8 NC_010485 170650740
199 Escherichia coli str. 'clone D i14' NC_017652 386632422
200 Escherichia coli str. 'clone D i2' NC_017651 386627502
201 Escherichia coli str. K-12 substr. W3110 NC_007779 388476123
202 Escherichia coli str. K12 substr. DH10B NC_010473 170079663
203 Escherichia coli str. K12 substr. MG1655 NC_000913 49175990
204 Escherichia coli UM146 NC_017632 386602643
205 Escherichia coli UM146 pUM146 NC_017630 386602509
206 Escherichia coli UMN026 NC_011751 218703261
207 Escherichia coli UMN026 p1ESCUM NC_011749 218692794
208 Escherichia coli UMN026 p2ESCUM NC_011739 218454959
209 Escherichia coli UMNK88 NC_017641 386612163
210 Escherichia coli UMNK88 pUMNK88 NC_017645 386617342
211 Escherichia coli UMNK88 pUMNK88_91 NC_017642 386611903
212 Escherichia coli UMNK88 pUMNK88_Ent NC_017640 386612081
213 Escherichia coli UMNK88 pUMNK88_Hly NC_017643 386617281
214 Escherichia coli UMNK88 pUMNK88_K88 NC_017639 386611993
215 Escherichia coli UTI89 NC_007946 91209055 ntec10
216 Escherichia coli UTI89 pUTI89 NC_007941 91206245 ntec10
217 Escherichia coli Vir68 pVir68 NC_012944 253800975
218 Escherichia coli W NC_017635 386607309
219 Escherichia coli W NC_017664 386707734
220 Escherichia coli W pRK1 NC_017665 386707622
221 Escherichia coli W pRK1 NC_017637 386611788
222 Escherichia coli W pRK2 NC_017636 386607294
223 Escherichia coli W pRK2 NC_017662 386707609
224 Escherichia coli Xuzhou21 NC_017906 387880559
225 Escherichia coli Xuzhou21 pO157 NC_017907 387885599
226 Escherichia coli Xuzhou21 pO157_Sal NC_017903 387873357
28 Francisella tularensis 1 Francisella tularensis pOM1 NC_002109 10954617
2 Francisella tularensis subsp. holarctica NC_007880 89255449 ntft11
3 Francisella tularensis subsp. holarctica FTNF002-00 NC_009749 156501369
4 Francisella tularensis subsp. holarctica OSU18 NC_008369 115313981
5 Francisella tularensis subsp. mediasiatica FSC147 NC_010677 187930913
6 Francisella tularensis subsp. novicida pFNL10 NC_004952 32455353
7 Francisella tularensis subsp. novicida U112 NC_008601 118496615
8 Francisella tularensis subsp. tularensis ATCC 6223 NR_029362 265679054
9 Francisella tularensis subsp. tularensis FSC198 NC_008245 110669657
10 Francisella tularensis subsp. tularensis NE061598 NC_017453 385793751
11 Francisella tularensis subsp. tularensis SCHU S4 NC_006570 255961454 ntft06
12 Francisella tularensis subsp. tularensis TI0902 NC_016937 379725073
13 Francisella tularensis subsp. tularensis TIGB03 NC_016933 379716390
14 Francisella tularensis subsp. tularensis WY96-3418 NC_009257 134301169
29 Haemophilus influenzae 1 Haemophilus influenzae NR_044682 343206093
2 Haemophilus influenzae ICEhin1056 NC_011409 209947517
3 Haemophilus influenzae PB1000 NC_014813 315497046
4 Haemophilus influenzae 10810 NC_016809 378696079
5 Haemophilus influenzae 86-028NP NC_007146 162960935
6 Haemophilus influenzae biotype aegyptius pF1947 NC_007206 71558958
7 Haemophilus influenzae biotype aegyptius pF3028 NC_004058 21628923
8 Haemophilus influenzae biotype aegyptius pF3031 NC_004846 31983465
9 Haemophilus influenzae F3031 NC_014920 319896422
10 Haemophilus influenzae F3047 NC_014922 319774951
11 Haemophilus influenzae PittEE NC_009566 148825133
12 Haemophilus influenzae PittGG NC_009567 148826757
13 Haemophilus influenzae R2846 NC_017452 386265029
14 Haemophilus influenzae R2866 NC_017451 386263233
15 Haemophilus influenzae Rd KW20 NC_000907 16271976
30 Helicobacter 1 Helicobacter acinonychis str. Sheeba NC_008229 109946640
2 Helicobacter acinonychis str. Sheeba pHac1 NC_008230 109948253
3 Helicobacter bizzozeronii CIII-1 NC_015674 336452232
4 Helicobacter bizzozeronii CIII-1 phbz1 NC_015670 336319056
5 Helicobacter cetorum MIT 00-7128 NC_017737 386748726
6 Helicobacter cetorum MIT 00-7128 pHCW NC_017738 386748711
7 Helicobacter cetorum MIT 99-5656 NC_017735 386747036
8 Helicobacter cetorum MIT 99-5656 pHCD NC_017736 386747020
9 Helicobacter cinaedi PAGU611 NC_017761 386760820
10 Helicobacter cinaedi PAGU611 pHci1 NC_017762 386829695
11 Helicobacter equorum NR_043707 343203790
12 Helicobacter felis ATCC 49179 NC_014810 332309247
13 Helicobacter hepaticus ATCC 51449 NC_004917 32265499 nthp02
14 Helicobacter mustelae 12198 NC_013949 291276243
15 Helicobacter phage phiHP33 NC_016568 371671341
16 Helicobacter pylori NR_044761 343206171
17 Helicobacter pylori HPB8p NC_014257 298717635
18 Helicobacter pylori pAL202 NC_005917 49145920
19 Helicobacter pylori pAL226 NC_013547 270208693
20 Helicobacter pylori pAL236-11 NC_014161 296267991
21 Helicobacter pylori pAL236-2 NC_014162 296267994
22 Helicobacter pylori pAL236-5 NC_014163 296267996
23 Helicobacter pylori pHel4 NC_004950 32455337
24 Helicobacter pylori pHel5 NC_004949 32455321
25 Helicobacter pylori pHP489 NC_001843 10954603
26 Helicobacter pylori pHP51 NC_004767 30387182
27 Helicobacter pylori pHP666 NC_010932 190570331
28 Helicobacter pylori pHP69 NC_010884 190409963
29 Helicobacter pylori pHPM180 NC_001756 10954600
30 Helicobacter pylori pHPM186 NC_001476 10954608
31 Helicobacter pylori pHPM8 NC_004845 31983001
32 Helicobacter pylori pHPO100 NC_002110 10954605
33 Helicobacter pylori 2017 NC_017374 385223048
34 Helicobacter pylori 2018 NC_017381 385230889
35 Helicobacter pylori 26695 NC_000915 15644634 ghp
36 Helicobacter pylori 35A NC_017360 384895178
37 Helicobacter pylori 51 NC_017382 387781698
38 Helicobacter pylori 52 NC_017354 384887043
39 Helicobacter pylori 83 NC_017375 385224642
40 Helicobacter pylori 908 NC_017357 384890373
41 Helicobacter pylori B38 NC_012973 254778738
42 Helicobacter pylori B8 NC_014256 298735500
43 Helicobacter pylori Cuz20 NC_017358 384892008
44 Helicobacter pylori ELS37 NC_017063 383749063
45 Helicobacter pylori ELS37 pHPELS37 NC_017064 383750634
46 Helicobacter pylori F16 NC_017368 385216759
47 Helicobacter pylori F30 NC_017365 384898367
48 Helicobacter pylori F30 pHPF30 NC_017369 385218260
49 Helicobacter pylori F32 NC_017366 385215269
50 Helicobacter pylori F32 pHPF32 NC_017370 386262355
51 Helicobacter pylori F57 NC_017367 385248496
52 Helicobacter pylori G27 NC_011333 208433976
53 Helicobacter pylori G27 pHPG27 NC_011334 208435470
54 Helicobacter pylori Gambia94/24 NC_017371 385218266
55 Helicobacter pylori Gambia94/24 unnamed NC_017364 385219871
56 Helicobacter pylori HPAG1 NC_008086 108562424
57 Helicobacter pylori HPAG1 pHPAG1 NC_008087 108564598
58 Helicobacter pylori HUP-B14 NC_017733 386745526
59 Helicobacter pylori HUP-B14 pHPB14 NC_017734 386745517
60 Helicobacter pylori India7 NC_017372 385219873
61 Helicobacter pylori J99 NC_000921 15611071 nthp01
62 Helicobacter pylori Lithuania75 NC_017362 384896752
63 Helicobacter pylori Lithuania75 unnamed NC_017363 384896665
64 Helicobacter pylori P12 NC_011498 210134201
65 Helicobacter pylori P12 HPP12 NC_011499 210135770
66 Helicobacter pylori PeCan18 NC_017742 386755084
67 Helicobacter pylori PeCan4 NC_014555 308182188
68 Helicobacter pylori PeCan4 pHPPC4 NC_014556 308183744
69 Helicobacter pylori Puno120 NC_017378 385227773
70 Helicobacter pylori Puno120 pHPPN120 NC_017377 385229299
71 Helicobacter pylori Puno135 NC_017379 385229315
72 Helicobacter pylori Sat464 NC_017359 384893616
73 Helicobacter pylori Sat464 pHPSAT464 NC_017356 384893581
74 Helicobacter pylori Shi112 NC_017741 386753519
75 Helicobacter pylori Shi169 NC_017740 386751993
76 Helicobacter pylori Shi417 NC_017739 386750444
77 Helicobacter pylori Shi470 NC_010698 209406223
78 Helicobacter pylori SJM180 NC_014560 308183796
79 Helicobacter pylori SNT49 NC_017376 385226252
80 Helicobacter pylori SNT49 pHPSNT NC_017380 385227768
81 Helicobacter pylori SouthAfrica7 NC_017361 385221504
82 Helicobacter pylori SouthAfrica7 unnamed NC_017373 385221474
83 Helicobacter pylori v225d NC_017355 384888657
84 Helicobacter pylori v225d pHPv225d NC_017383 384888493
85 Helicobacter pylori XZ274 NC_017926 387907368
86 Helicobacter pylori XZ274 pXZ274 NC_017919 387908781
31 Lawsonia intracellularis 1 Lawsonia intracellularis NR_044626 343199131
2 Lawsonia intracellularis PHE/MN1-00 NC_008011 94986445
3 Lawsonia intracellularis PHE/MN1-00 1 NC_008012 94972343
4 Lawsonia intracellularis PHE/MN1-00 2 NC_008013 94972373
5 Lawsonia intracellularis PHE/MN1-00 3 NC_008014 94972398
32 Legionella pneumophila 1 Legionella pneumophila 2300/99 Alcoy NC_014125 296105497
2 Legionella pneumophila str. Corby NC_009494 295815281
3 Legionella pneumophila str. Lens NC_006369 54292964 ntlp02
4 Legionella pneumophila str. Lens pLPL NC_006366 54292907 ntlp02
5 Legionella pneumophila str. Paris NC_006368 54295983 ntlp03
6 Legionella pneumophila str. Paris pLPP NC_006365 54295843 ntlp03
7 Legionella pneumophila subsp. pneumophila NC_018139 397662556
8 Legionella pneumophila subsp. pneumophila NC_018140 397665626
9 Legionella pneumophila subsp. pneumophila pLELO NC_018141 397668686
10 Legionella pneumophila subsp. pneumophila ATCC 43290 NC_016811 378775961
11 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 NC_002942 52840256 ntlp04
33 Listeria monocytogenes 1 Listeria monocytogenes NR_044823 343206231
2 Listeria monocytogenes pLM1-2bUG1 NC_014495 307069350
3 Listeria monocytogenes pLM33 NC_014255 298740847
4 Listeria monocytogenes 07PF0776 NC_017728 386730761
5 Listeria monocytogenes 08-5578 NC_013766 284800255
6 Listeria monocytogenes 08-5578 pLM5578 NC_013767 284803266
7 Listeria monocytogenes 08-5923 NC_013768 284993440
8 Listeria monocytogenes 10403S NC_017544 386042347
9 Listeria monocytogenes Clip80459 NC_012488 226222639
10 Listeria monocytogenes EGD-e NC_003210 16802048 ntlm01
11 Listeria monocytogenes Finland 1998 NC_017547 386052273
12 Listeria monocytogenes FSL R2-561 NC_017546 386048930
13 Listeria monocytogenes HCC23 NC_011660 217963303
14 Listeria monocytogenes J0161 NC_017545 386045634
15 Listeria monocytogenes L99 NC_017529 386006713
16 Listeria monocytogenes M7 NC_017537 386025288
17 Listeria monocytogenes str. 4b F2365 NC_002973 85700163 blm
34 Mycobacterium tuberculosis 1 Mycobacterium tuberculosis NR_044826 343206234
2 Mycobacterium tuberculosis CCDC5079 NC_017523 385993125
3 Mycobacterium tuberculosis CCDC5180 NC_017522 385989534
4 Mycobacterium tuberculosis CDC1551 NC_002755 50953765 gmt
5 Mycobacterium tuberculosis CTRI-2 NC_017524 385996772
6 Mycobacterium tuberculosis F11 NC_009565 148821191
7 Mycobacterium tuberculosis H37Ra NC_009525 148659757
8 Mycobacterium tuberculosis H37Rv NC_000962 57116681 ntmt02
9 Mycobacterium tuberculosis H37Rv NC_018143 397671778
10 Mycobacterium tuberculosis KZN 1435 NC_012943 253796915
11 Mycobacterium tuberculosis KZN 4207 NC_016768 375294201
12 Mycobacterium tuberculosis KZN 605 NC_018078 392430409
13 Mycobacterium tuberculosis RGTB327 NC_017026 383305933
14 Mycobacterium tuberculosis RGTB423 NC_017528 386003090
15 Mycobacterium tuberculosis UT205 NC_016934 392384721
35 Mycoplasma gallisepticum 1 Mycoplasma gallisepticum CA06_2006.052-5-2P NC_018412 401770401
2 Mycoplasma gallisepticum NC06_2006.080-5-2P NC_018411 401769656
3 Mycoplasma gallisepticum NC08_2008.031-4-3P NC_018413 401771165
4 Mycoplasma gallisepticum NC95_13295-2-2P NC_018407 401766621
5 Mycoplasma gallisepticum NC96_1596-4-2P NC_018408 401767376
6 Mycoplasma gallisepticum NY01_2001.047-5-1P NC_018409 401768148
7 Mycoplasma gallisepticum str. F NC_017503 385325853
8 Mycoplasma gallisepticum str. R(high) NC_017502 385325086
9 Mycoplasma gallisepticum str. R(low) NC_004829 294660180
10 Mycoplasma gallisepticum VA94_7994-1-7P NC_018406 401765853
11 Mycoplasma gallisepticum WI01_2001.043-13-2P NC_018410 401768909
36 Mycoplasma pneumoniae 1 Mycoplasma pneumoniae 309 NC_016807 377822306
2 Mycoplasma pneumoniae FH NC_017504 385326614
3 Mycoplasma pneumoniae M129 NC_000912 13507739
37 Mycoplasma synoviae 1 Mycoplasma synoviae NR_044811 343206219
2 Mycoplasma synoviae 53 NC_007294 71894025
38 Neisseria gonorrhoeae 1 Neisseria gonorrhoeae NR_026079 219846487
2 Neisseria gonorrhoeae pCmGFP NC_011521 211909964
3 Neisseria gonorrhoeae pEP5289 NC_014105 295788810
4 Neisseria gonorrhoeae pJD4 NC_002098 10955179
5 Neisseria gonorrhoeae pSJ5.2 NC_010881 190410142
6 Neisseria gonorrhoeae FA 1090 NC_002946 59800473
7 Neisseria gonorrhoeae NCCP11945 NC_011035 194097589
8 Neisseria gonorrhoeae NCCP11945 pNGK NC_011034 194097576
9 Neisseria gonorrhoeae TCDC-NG08107 NC_017511 385334895
10 Neisseria gonorrhoeae TCDC-NG08107 pNGTCDC08107 NC_017510 385334849
39 Neisseria meningitidis 1 Neisseria meningitidis pJS-B NC_004758 30250494
2 Neisseria meningitidis 053442 NC_010120 161869018
3 Neisseria meningitidis 8013 NC_017501 385323172
4 Neisseria meningitidis alpha14 NC_013016 254804028
5 Neisseria meningitidis alpha710 NC_017505 385327372
6 Neisseria meningitidis FAM18 NC_008767 121633901
7 Neisseria meningitidis G2136 NC_017513 385339062
8 Neisseria meningitidis H44/76 NC_017516 385852231
9 Neisseria meningitidis M01-240149 NC_017514 385340991
10 Neisseria meningitidis M01-240355 NC_017517 385854193
11 Neisseria meningitidis M04-240196 NC_017515 385850283
12 Neisseria meningitidis MC58 NC_003112 77358697
13 Neisseria meningitidis NZ-05/33 NC_017518 385856165
14 Neisseria meningitidis WUE 2594 NC_017512 385337120
15 Neisseria meningitidis Z2491 NC_003116 15793034
40 Plasmodium berghei 1 Plasmodium berghei NC_015303 327185716
42 Proteus mirabilis 1 Proteus mirabilis HI4320 NC_010554 197283915
2 Proteus mirabilis HI4320 pHI4320 NC_010555 172055989
43 Pseudomonas aeruginosa 1 Pseudomonas aeruginosa NR_026078 219846486
2 Pseudomonas aeruginosa pBS228 NC_008357 114881096
3 Pseudomonas aeruginosa pMATVIM-7 NC_009739 156144893
4 Pseudomonas aeruginosa pMM1 NC_010722 189009159
5 Pseudomonas aeruginosa Rms149 NC_007100 66968557
6 Pseudomonas aeruginosa DK2 NC_018080 392981410
7 Pseudomonas aeruginosa LESB58 NC_011770 218888746
8 Pseudomonas aeruginosa M18 NC_017548 386056071
9 Pseudomonas aeruginosa NCGM2.S1 1 NC_017549 386062973
10 Pseudomonas aeruginosa PA7 NC_009656 152983466
11 Pseudomonas aeruginosa PAO1 NC_002516 110645304
12 Pseudomonas aeruginosa UCBPP-PA14 NC_008463 116048575
44 Rickettsia prowazekii 1 Rickettsia prowazekii NR_044656 343199138
2 Rickettsia prowazekii Rp22 NC_017560 386081834
3 Rickettsia prowazekii str. BuV67-CWPP NC_017056 383499256
4 Rickettsia prowazekii str. Chernikova NC_017049 383487432
5 Rickettsia prowazekii str. Dachau NC_017051 383489123
6 Rickettsia prowazekii str. GvV257 NC_017048 383486602
7 Rickettsia prowazekii str. Katsinyian NC_017050 383488278
8 Rickettsia prowazekii str. Madrid E NC_000963 15603881 ntrp01
9 Rickettsia prowazekii str. RpGvF24 NC_017057 383500100
45 Rickettsia rickettsii 1 Rickettsia rickettsii str. 'Sheila Smith' NC_009882 157827862
2 Rickettsia rickettsii str. Arizona NC_016909 378722019
3 Rickettsia rickettsii str. Brazil NC_016913 379015834
4 Rickettsia rickettsii str. Colombia NC_016908 378720668
5 Rickettsia rickettsii str. Hauke NC_016911 378723377
6 Rickettsia rickettsii str. Hino NC_016914 379017167
7 Rickettsia rickettsii str. Hino pRPJ NC_016910 378723363
8 Rickettsia rickettsii str. Hlp#2 NC_016915 379018503
9 Rickettsia rickettsii str. Iowa NC_010263 319717301
46 Salmonella 1 Salmonella bongori NCTC 12419 NC_015761 339998036
2 Salmonella choleraesuis pSFD10 NC_003079 15320547
3 Salmonella enterica pAM04528 NC_012693 237810097
4 Salmonella enterica pOU1113 NC_007208 71559001
5 Salmonella enterica pSGI15 NC_012916 253723602
6 Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- NC_010067 161501984
7 Salmonella enterica subsp. enterica serovar Agona str. SL483 NC_011149 197247352
8 Salmonella enterica subsp. enterica serovar Agona str. SL483 unnamed NC_011148 197247299
9 Salmonella enterica subsp. enterica serovar Bardo pSBardo-Kan NC_015575 334139592
10 Salmonella enterica subsp. enterica serovar Berta pBERT NC_001848 10956782
11 Salmonella enterica subsp. enterica serovar Bovismorbificans p2007057 NC_011897 221101559
12 Salmonella enterica subsp. enterica serovar Brandenburg pUO-SbR3 NC_010499 170783417
13 Salmonella enterica subsp. enterica serovar Brandenburg pUO-SbR5 NC_010500 170783423
14 Salmonella enterica subsp. enterica serovar Choleraesuis cryptic plasmid NC_005862 46518338
15 Salmonella enterica subsp. enterica serovar Choleraesuis pKDSC50 NC_002638 12084932
16 Salmonella enterica subsp. enterica serovar Choleraesuis pMAK1 NC_009981 160431713
17 Salmonella enterica subsp. enterica serovar Choleraesuis pOU7519 NC_010119 161867876
18 Salmonella enterica subsp. enterica serovar Choleraesuis str. SC NC_006905 62178570
19 Salmonella enterica subsp. enterica serovar Choleraesuis str. SC pSC138 NC_006856 60115514
20 Salmonella enterica subsp. enterica serovar Choleraesuis str. SC pSCV50 NC_006855 60115462
21 Salmonella enterica subsp. enterica serovar Dublin IncW pIE321 NC_010716 189009811
22 Salmonella enterica subsp. enterica serovar Dublin pMAK2 NC_009980 160431608
23 Salmonella enterica subsp. enterica serovar Dublin pMAK3 NC_009982 160431661
24 Salmonella enterica subsp. enterica serovar Dublin pOU1114 NC_010421 169646974
25 Salmonella enterica subsp. enterica serovar Dublin pOU1115 NC_010422 169647022
26 Salmonella enterica subsp. enterica serovar Dublin pSD853_7.9 NC_015392 328802655
27 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021 NC_011205 198241740
28 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021 pCT02021853_74 NC_011204 198241636
29 Salmonella enterica subsp. enterica serovar Enteritidis pSE34 NC_010860 190015807
30 Salmonella enterica subsp. enterica serovar Enteritidis pVCM04 NC_014354 302122898
31 Salmonella enterica subsp. enterica serovar Enteritidis str. P12 NC_011294 207855516
32 Salmonella enterica subsp. enterica serovar Gallinarum str. 287/ NC_011274 205351346
33 Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078 NC_016831 378953804
34 Salmonella enterica subsp. enterica serovar Heidelberg str. B182 NC_017623 386589256
35 Salmonella enterica subsp. enterica serovar Heidelberg str. B182 pB182_37 NC_017624 386593545
36 Salmonella enterica subsp. enterica serovar Heidelberg str. SL47 NC_011083 194447306
37 Salmonella enterica subsp. enterica serovar Heidelberg str. SL47 pSL476_3 NC_011082 194447301
38 Salmonella enterica subsp. enterica serovar Heidelberg str. SL47 pSL476_91 NC_011081 194447175
39 Salmonella enterica subsp. enterica serovar Kentucky str. CVM291 pCVM29188_101 NC_011077 194446987
40 Salmonella enterica subsp. enterica serovar Kentucky str. CVM291 pCVM29188_146 NC_011076 194446816
41 Salmonella enterica subsp. enterica serovar Kentucky str. CVM291 pCVM29188_46 NC_011078 194447124
42 Salmonella enterica subsp. enterica serovar Newport pA172 NC_010259 165975445
43 Salmonella enterica subsp. enterica serovar Newport pSN11/00Kan NC_014003 294496678
44 Salmonella enterica subsp. enterica serovar Newport str. SL254 NC_011080 194442203
45 Salmonella enterica subsp. enterica serovar Newport str. SL254 pSL254_3 NC_011079 194442198
46 Salmonella enterica subsp. enterica serovar Newport str. SL254 pSN254 NC_009140 134047083
47 Salmonella enterica subsp. enterica serovar Paratyphi A pGY1 NC_010894 190571868
48 Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU NC_011147 197361212
49 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATC NC_006511 56412276
50 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB NC_010102 161612313
51 Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594 NC_012125 224581838
52 Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594 pSPCV NC_012124 224504235
53 Salmonella enterica subsp. enterica serovar Schwarzengrund str. NC_011094 194733902
54 Salmonella enterica subsp. enterica serovar Schwarzengrund str. pCVM19633_110 NC_011092 194733773
55 Salmonella enterica subsp. enterica serovar Schwarzengrund str. pCVM19633_4 NC_011093 194733896
56 Salmonella enterica subsp. enterica serovar Typhi str. 404ty pBSSB1 NC_011422 210062465
57 Salmonella enterica subsp. enterica serovar Typhi str. CT18 NC_003198 16758993
58 Salmonella enterica subsp. enterica serovar Typhi str. CT18 pHCM1 NC_003384 18466424
59 Salmonella enterica subsp. enterica serovar Typhi str. CT18 pHCM2 NC_003385 18466665
60 Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 NC_016832 378958130
61 Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 unnamed NC_016825 378962821
62 Salmonella enterica subsp. enterica serovar Typhi str. Ty2 NC_004631 29140543
63 Salmonella enterica subsp. enterica serovar Typhimurium pSe-Kan NC_015570 334139584
64 Salmonella enterica subsp. enterica serovar Typhimurium pSLT-BT NC_013437 261888681
65 Salmonella enterica subsp. enterica serovar Typhimurium pST728/06-2 NC_010993 192351290
66 Salmonella enterica subsp. enterica serovar Typhimurium pTPqnrS-1a NC_009807 157326586
67 Salmonella enterica subsp. enterica serovar Typhimurium pYT1 NC_014476 305696832
68 Salmonella enterica subsp. enterica serovar Typhimurium R621a NC_015965 345134005
69 Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S NC_016856 378448274
70 Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S unnamed NC_016855 378448040
71 Salmonella enterica subsp. enterica serovar Typhimurium str. 798 NC_017046 383494824
72 Salmonella enterica subsp. enterica serovar Typhimurium str. 798 p798_93 NC_017054 383499151
73 Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 NC_016810 378697983
74 Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 pCol1B9_SL1344 NC_017718 386730549
75 Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 pRSF1010_SL1344 NC_017719 386730646
76 Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 pSLT_SL1344 NC_017720 386730659
77 Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 NC_016857 379699217
78 Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 TY474p1 NC_016858 379699100
79 Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 TY474p2 NC_017675 386730446
80 Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 TY474p3 NC_016859 386730537
81 Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 NC_016860 378982542
82 Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 pSTMDT12_L NC_016861 378987264
83 Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 pSTMDT12_S NC_016862 377542923
84 Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 NC_016863 378987404
85 Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 pSTUK-100 NC_016864 378991860
86 Salmonella enterica subsp. enterica serovar Virchow str. SL491 pSL491_3 NC_011215 198448638
87 Salmonella enterica subsp. enterica serovar Virchow str. SL491 pSL491_5 NC_011214 198448632
88 Salmonella enterica subsp. enterica serovar Westhampton pWES-1 NC_011604 216700335
89 Salmonella enteritidis pB NC_005002 32470132
90 Salmonella enteritidis pC NC_003457 19718328
91 Salmonella enteritidis pK NC_003456 19718324
92 Salmonella enteritidis pP NC_003455 19718320
93 Salmonella phage 7-11 NC_015938 345461107
94 Salmonella phage epsilon34 NC_011976 221328618
95 Salmonella phage Fels-1 NC_010391 169257155
96 Salmonella phage g341c NC_013059 255252682
97 Salmonella phage phiSG-JL2 NC_010807 189427193
98 Salmonella phage PVP-SE1 NC_016071 363539522
99 Salmonella phage SE1 NC_011802 219681191
100 Salmonella phage SE2 NC_016763 375267221
101 Salmonella phage SETP3 NC_009232 134288562
102 Salmonella phage SFP10 NC_016073 351518443
103 Salmonella phage SPN1S NC_016761 374531191
104 Salmonella phage SPN9CC NC_017985 389060488
105 Salmonella phage SS3e NC_006940 373231359
106 Salmonella phage ST160 NC_014900 318065901
107 Salmonella phage ST64B NC_004313 23505445
108 Salmonella phage vB_SemP_Emek NC_018275 399498791
109 Salmonella phage vB_SosS_Oslo NC_018279 399528758
110 Salmonella phage Vi II-E1 NC_010495 170676276
111 Salmonella phage Vi01 NC_015296 326804500
112 Salmonella phage Vi06 NC_015271 326633040
113 Salmonella typhi R27 NC_002305 10957190
114 Salmonella typhimurium pAnkS NC_010896 190570391
115 Salmonella typhimurium pSC101 NC_002056 10955533
116 Salmonella typhimurium pU302L NC_006816 58383237
117 Salmonella typhimurium pU302S NC_006815 58383212
118 Salmonella typhimurium R64 NC_005014 32470134
119 Salmonella typhimurium LT2 NC_003197 16763390
120 Salmonella typhimurium LT2 pSLT NC_003277 17233403
47 Shigella 1 Shigella boydii CDC 3083-94 NC_010658 187730020
2 Shigella boydii CDC 3083-94 pBS512_2 NC_010656 187729963
3 Shigella boydii CDC 3083-94 pBS512_211 NC_010660 187734273
4 Shigella boydii CDC 3083-94 pBS512_33 NC_010657 187729967
5 Shigella boydii CDC 3083-94 pBS512_5 NC_010659 187734267
6 Shigella boydii CDC 3083-94 pBS512_7 NC_010672 187918703
7 Shigella boydii Sb227 NC_007613 82542618 ntsb02
8 Shigella boydii Sb227 pSB4_227 NC_007608 82524664 ntsb02
9 Shigella dysenteriae Sd197 NC_007606 82775382 ntsd02
10 Shigella dysenteriae Sd197 pSD197_spA NC_009344 145294016 ntsd02
11 Shigella dysenteriae Sd197 pSD1_197 NC_007607 82524407 ntsd02
12 Shigella flexneri pWR501 NC_002698 13448939
13 Shigella flexneri 2002017 NC_017328 384541581
14 Shigella flexneri 2002017 pSFxv_1 NC_017319 384545966
15 Shigella flexneri 2002017 pSFxv_2 NC_017320 384541569
16 Shigella flexneri 2002017 pSFxv_3 NC_017329 384541560
17 Shigella flexneri 2002017 pSFxv_4 NC_017321 384545954
18 Shigella flexneri 2002017 pSFxv_5 NC_017330 384545959
19 Shigella flexneri 2a p2457TS2 NC_002773 14141971
20 Shigella flexneri 2a str. 2457T NC_004741 30061571 ntsf02
21 Shigella flexneri 2a str. 301 NC_004337 344915202 ntsf01
22 Shigella flexneri 2a str. 301 pCP301 NC_004851 31983523 ntsf01
23 Shigella flexneri 5 str. 8401 NC_008258 110804074
24 Shigella phage EP23 NC_016566 371496268
25 Shigella phage phiSboM-AG3 NC_013693 282599175
26 Shigella phage Shfl1 NC_015456 330858444
27 Shigella phage Shfl2 NC_015457 330858525
28 Shigella phage SP18 NC_014595 308814351
29 Shigella sonnei ColJs NC_002809 14589348
30 Shigella sonnei pEG356 NC_013727 283826834
31 Shigella sonnei pKKTET7 NC_008439 115534270
32 Shigella sonnei 53G NC_016822 377520096
33 Shigella sonnei 53G A NC_016833 377549524
34 Shigella sonnei 53G B NC_016823 377520097
35 Shigella sonnei 53G C NC_016824 377520098
36 Shigella sonnei 53G E NC_016834 377549525
37 Shigella sonnei Ss046 NC_007384 74310614 ntss04
38 Shigella sonnei Ss046 pSS046_spA NC_009345 145294025 ntss04
39 Shigella sonnei Ss046 pSS046_spB NC_009346 145294031 ntss04
40 Shigella sonnei Ss046 pSS046_spC NC_009347 145294040 ntss04
41 Shigella sonnei Ss046 pSS_046 NC_007385 74314838 ntss04
48 Staphylococcus aureus 1 Staphylococcus aureus EDINA NC_010077 161598491
2 Staphylococcus aureus J3358 NC_001763 10956144
3 Staphylococcus aureus p21 NC_002517 10956174
4 Staphylococcus aureus pBORa53 NC_013550 270208715
5 Staphylococcus aureus pC194 NC_002013 10956139
6 Staphylococcus aureus pC221 NC_006977 211774469
7 Staphylococcus aureus pC221 NC_002129 10956162
8 Staphylococcus aureus pC223 NC_005243 38639778
9 Staphylococcus aureus pCM05 NC_013323 260666220
10 Staphylococcus aureus pDLK3 NC_013969 292657203
11 Staphylococcus aureus pE194 NC_005908 49489772
12 Staphylococcus aureus pETB NC_003265 17227177
13 Staphylococcus aureus pGO1 NC_012547 226464389
14 Staphylococcus aureus pI258 NC_013319 260666110
15 Staphylococcus aureus pJ3356::pOX7 NC_002157 10956149
16 Staphylococcus aureus pJ3356::POX7 NC_002156 10956147
17 Staphylococcus aureus pKH12 NC_010687 188039002
18 Staphylococcus aureus pKH13 NC_010426 170780403
19 Staphylococcus aureus pKH14 NC_010428 170780409
20 Staphylococcus aureus pKH15 NC_010427 170780406
21 Staphylococcus aureus pKH16 NC_010262 165975441
22 Staphylococcus aureus pKH17 NC_010284 166153459
23 Staphylococcus aureus pKH18 NC_010231 164564304
24 Staphylococcus aureus pKH19 NC_010685 188039008
25 Staphylococcus aureus pKH20 NC_010686 188039005
26 Staphylococcus aureus pKH21 NC_010684 188039011
27 Staphylococcus aureus pKH3 NC_005020 32470383
28 Staphylococcus aureus pKH6 NC_001767 10956151
29 Staphylococcus aureus pKH7 NC_002096 10956155
30 Staphylococcus aureus pLW043 NC_005054 33416233
31 Staphylococcus aureus pMW2 NC_005011 32470355
32 Staphylococcus aureus pNVH01 NC_004562 28261693
33 Staphylococcus aureus pPR9 NC_013653 281427745
34 Staphylococcus aureus pRJ6 NC_011522 212383450
35 Staphylococcus aureus pS194 NC_005564 42761423
36 Staphylococcus aureus pSA1308 NC_007928 90969145
37 Staphylococcus aureus pSA1379 NC_007931 90969148
38 Staphylococcus aureus pSK1 NC_014369 302344722
39 Staphylococcus aureus pSK156 NC_013348 260667570
40 Staphylococcus aureus pSK3 NC_001994 10956168
41 Staphylococcus aureus pSK41 NC_005024 32470385
42 Staphylococcus aureus pSK6 NC_001995 10956171
43 Staphylococcus aureus pSK62 NC_013347 260667569
44 Staphylococcus aureus pSK76 NC_013352 260667574
45 Staphylococcus aureus pSN2 NC_005565 42761428
46 Staphylococcus aureus pTZ2162 NC_010419 170780412
47 Staphylococcus aureus pTZ4 NC_010111 162145842
48 Staphylococcus aureus pUB101 NC_005127 37595761
49 Staphylococcus aureus pV030-8 NC_010279 166153441
50 Staphylococcus aureus pVGA NC_011605 215401543
51 Staphylococcus aureus pWBG1773 NC_010616 187729625
52 Staphylococcus aureus pWBG738 NC_007209 71558996
53 Staphylococcus aureus pWBG745 NC_013325 260667421
54 Staphylococcus aureus pWBG746 NC_013326 260667452
55 Staphylococcus aureus pWBG749 NC_013327 260667549
56 Staphylococcus aureus pWBG753 NC_013328 260667550
57 Staphylococcus aureus pWBG754 NC_013350 260667572
58 Staphylococcus aureus pWBG758 NC_013329 260667551
59 Staphylococcus aureus pWBG759 NC_013330 260667552
60 Staphylococcus aureus SAP012A NC_013318 260666101
61 Staphylococcus aureus SAP014A NC_013320 260666135
62 Staphylococcus aureus SAP017A NC_013321 260666163
63 Staphylococcus aureus SAP019A NC_013322 260666193
64 Staphylococcus aureus SAP027A NC_013324 260667403
65 Staphylococcus aureus SAP047A NC_013331 260667553
66 Staphylococcus aureus SAP052A NC_013332 260667554
67 Staphylococcus aureus SAP055A NC_013333 260667555
68 Staphylococcus aureus SAP057A NC_013334 260667556
69 Staphylococcus aureus SAP060A NC_013335 260667557
70 Staphylococcus aureus SAP060B NC_013336 260667558
71 Staphylococcus aureus SAP063A NC_013351 260667573
72 Staphylococcus aureus SAP064A NC_013337 260667559
73 Staphylococcus aureus SAP068A NC_013338 260667560
74 Staphylococcus aureus SAP069A NC_013339 260667561
75 Staphylococcus aureus SAP076A NC_013340 260667562
76 Staphylococcus aureus SAP077B NC_013341 260667563
77 Staphylococcus aureus SAP079A NC_013342 260667564
78 Staphylococcus aureus SAP080A NC_013343 260667565
79 Staphylococcus aureus SAP082A NC_013344 260667566
80 Staphylococcus aureus SAP085B NC_013345 260667567
81 Staphylococcus aureus SAP087A NC_013346 260667568
82 Staphylococcus aureus SAP099B NC_013349 260667571
83 Staphylococcus aureus 04-02981 NC_017340 387149188
84 Staphylococcus aureus RF122 NC_007622 82749777
85 Staphylococcus aureus subsp. aureus NR_037007 310975143
86 Staphylococcus aureus subsp. aureus 11819-97 NC_017351 385780298
87 Staphylococcus aureus subsp. aureus 11819-97 p11819-97 NC_017350 385782932
88 Staphylococcus aureus subsp. aureus 71193 NC_017673 386727822
89 Staphylococcus aureus subsp. aureus COL NC_002951 57650036
90 Staphylococcus aureus subsp. aureus COL pT181 NC_006629 77102894
91 Staphylococcus aureus subsp. aureus ECT-R 2 NC_017343 384863396
92 Staphylococcus aureus subsp. aureus ECT-R 2 pLUH01 NC_017346 384863394
93 Staphylococcus aureus subsp. aureus ECT-R 2 pLUH02 NC_017344 384863363
94 Staphylococcus aureus subsp. aureus ED133 NC_017337 384546269
95 Staphylococcus aureus subsp. aureus ED98 NC_013450 269201690
96 Staphylococcus aureus subsp. aureus ED98 pAVX NC_013453 262260515
97 Staphylococcus aureus subsp. aureus ED98 pAVY NC_013451 262225764
98 Staphylococcus aureus subsp. aureus ED98 pT181 NC_013452 262225767
99 Staphylococcus aureus subsp. aureus HO 5096 0412 NC_017763 386829725
100 Staphylococcus aureus subsp. aureus JH1 NC_009632 150392480
101 Staphylococcus aureus subsp. aureus JH1 pSJH101 NC_009619 150375692
102 Staphylococcus aureus subsp. aureus JH9 NC_009487 148266447
103 Staphylococcus aureus subsp. aureus JH9 pSJH901 NC_009477 148244139
104 Staphylococcus aureus subsp. aureus JKD6159 NC_017338 384548923
105 Staphylococcus aureus subsp. aureus JKD6159 pSaa6159 NC_017339 384551479
106 Staphylococcus aureus subsp. aureus LGA251 NC_017349 387779217
107 Staphylococcus aureus subsp. aureus LGA251 pLGA251 NC_017348 387781658
108 Staphylococcus aureus subsp. aureus M013 NC_016928 379019812
109 Staphylococcus aureus subsp. aureus MRSA252 NC_002952 49482253
110 Staphylococcus aureus subsp. aureus MSHR1132 NC_016941 379794527
111 Staphylococcus aureus subsp. aureus MSHR1132 pST75 NC_016942 379793806
112 Staphylococcus aureus subsp. aureus MSSA476 NC_002953 49484912
113 Staphylococcus aureus subsp. aureus MSSA476 pSAS NC_005951 49398098
114 Staphylococcus aureus subsp. aureus Mu3 NC_009782 156978331
115 Staphylococcus aureus subsp. aureus Mu50 NC_002758 57634611
116 Staphylococcus aureus subsp. aureus Mu50 VRSAp NC_002774 14141823
117 Staphylococcus aureus subsp. aureus MW2 NC_003923 21281729
118 Staphylococcus aureus subsp. aureus N315 NC_002745 29165615
119 Staphylococcus aureus subsp. aureus N315 pN315 NC_003140 16119200
120 Staphylococcus aureus subsp. aureus NCTC 8325 NC_007795 88193823
121 Staphylococcus aureus subsp. aureus S0385 NC_017333 387601291
122 Staphylococcus aureus subsp. aureus ST398 pKKS627 NC_014156 296274672
123 Staphylococcus aureus subsp. aureus ST398 pKKS825 NC_013034 308071690
124 Staphylococcus aureus subsp. aureus ST398 pS0385-1 NC_017334 387603991
125 Staphylococcus aureus subsp. aureus ST398 pS0385-2 NC_017335 384551502
126 Staphylococcus aureus subsp. aureus ST398 pS0385-3 NC_017336 387603996
127 Staphylococcus aureus subsp. aureus str. JKD6008 NC_017341 384860682
128 Staphylococcus aureus subsp. aureus str. Newman NC_009641 151220212
129 Staphylococcus aureus subsp. aureus T0131 NC_017347 384868588
130 Staphylococcus aureus subsp. aureus TCH60 NC_017342 384865886
131 Staphylococcus aureus subsp. aureus TCH60 unnamed NC_017345 384868560
132 Staphylococcus aureus subsp. aureus TW20 NC_017331 387141638
133 Staphylococcus aureus subsp. aureus TW20 pTW20_1 NC_017352 387144420
134 Staphylococcus aureus subsp. aureus TW20 pTW20_2 NC_017332 387144417
135 Staphylococcus aureus subsp. aureus USA300_FPR3757 NC_007793 87159884
136 Staphylococcus aureus subsp. aureus USA300_FPR3757 pUSA01 NC_007790 87159837
137 Staphylococcus aureus subsp. aureus USA300_FPR3757 pUSA02 NC_007791 87159843
138 Staphylococcus aureus subsp. aureus USA300_FPR3757 pUSA03 NC_007792 87159847
139 Staphylococcus aureus subsp. aureus USA300_TCH1516 NC_010079 161508266
140 Staphylococcus aureus subsp. aureus USA300_TCH1516 pUSA01-HOU NC_012417 225631039
141 Staphylococcus aureus subsp. aureus USA300_TCH1516 pUSA300HOUMR NC_010063 161510924
142 Staphylococcus aureus subsp. aureus USA300_TCH959 pUSA300HOUMS NC_010066 161508245
143 Staphylococcus aureus subsp. aureus VC40 NC_016912 379013365
49 Streptococcus agalactiae 1 Streptococcus agalactiae pGB2001 NC_015973 345325588
2 Streptococcus agalactiae pGB2002 NC_015971 345325568
3 Streptococcus agalactiae pGB354 NC_001797 10956203
4 Streptococcus agalactiae pGB3631 NC_002136 10956209
5 Streptococcus agalactiae pMV158 NC_010096 161722693
6 Streptococcus agalactiae 2603V/R NC_004116 22536185
7 Streptococcus agalactiae A909 NC_007432 76786714
8 Streptococcus agalactiae ATCC 13813 NR_040821 343200134
9 Streptococcus agalactiae NEM316 NC_004368 25010075
50 Streptococcus equi 1 Streptococcus equi subsp. equi 4047 NC_012471 225869487
2 Streptococcus equi subsp. zooepidemicus NC_012470 225867617
3 Streptococcus equi subsp. zooepidemicus ATCC 35246 NC_017582 386345754
4 Streptococcus equi subsp. zooepidemicus MGCS10565 NC_011134 195977156
51 Streptococcus pneumoniae 1 Streptococcus pneumoniae NR_028665 265678363
2 Streptococcus pneumoniae pSMB1 NC_005021 32470430
3 Streptococcus pneumoniae pSpnP1 NC_008350 114882495
4 Streptococcus pneumoniae 670-6B NC_014498 307126151
5 Streptococcus pneumoniae 70585 NC_012468 225857809
6 Streptococcus pneumoniae AP200 NC_014494 307066636
7 Streptococcus pneumoniae ATCC 700669 NC_011900 221230948
8 Streptococcus pneumoniae CGSP14 NC_010582 182682970
9 Streptococcus pneumoniae D39 NC_008533 116515308
10 Streptococcus pneumoniae D39 pDP1 NC_005022 32470434
11 Streptococcus pneumoniae G54 NC_011072 194396645
12 Streptococcus pneumoniae Hungary19A-6 NC_010380 169832377
13 Streptococcus pneumoniae INV104 NC_017591 387625543
14 Streptococcus pneumoniae INV200 NC_017593 387758384
15 Streptococcus pneumoniae JJA NC_012466 225853611
16 Streptococcus pneumoniae OXC141 NC_017592 387756560
17 Streptococcus pneumoniae P1031 NC_012467 225855735
18 Streptococcus pneumoniae R6 NC_003098 15902044
19 Streptococcus pneumoniae ST556 NC_017769 387787130
20 Streptococcus pneumoniae Taiwan19F-14 NC_012469 225860012
21 Streptococcus pneumoniae TCH8431/19A NC_014251 298501502
22 Streptococcus pneumoniae TIGR4 NC_003028 194172857
52 Streptococcus pyogenes 1 Streptococcus pyogenes pDN281 NC_010230 164564308
2 Streptococcus pyogenes pDN571 NC_006130 51039021
3 Streptococcus pyogenes pRW35 NC_010423 170780457
4 Streptococcus pyogenes pSM19035 NC_006979 63021982
5 Streptococcus pyogenes Alab49 NC_017596 386361880
6 Streptococcus pyogenes M1 GAS NC_002737 15674250
7 Streptococcus pyogenes MGAS10270 NC_008022 94989509
8 Streptococcus pyogenes MGAS10394 NC_006086 50913346
9 Streptococcus pyogenes MGAS10750 NC_008024 94993396
10 Streptococcus pyogenes MGAS15252 NC_017040 383479207
11 Streptococcus pyogenes MGAS1882 NC_017053 383493132
12 Streptococcus pyogenes MGAS2096 NC_008023 94991497
13 Streptococcus pyogenes MGAS315 NC_004070 21909536
14 Streptococcus pyogenes MGAS5005 NC_007297 71909814
15 Streptococcus pyogenes MGAS6180 NC_007296 71902667
16 Streptococcus pyogenes MGAS8232 NC_003485 19745201
17 Streptococcus pyogenes MGAS9429 NC_008021 94987631
18 Streptococcus pyogenes NZ131 NC_011375 209558587
19 Streptococcus pyogenes phage 315.3 NC_004586 28876263
20 Streptococcus pyogenes SSI-1 NC_004606 28894912
21 Streptococcus pyogenes str. Manfredo NC_009332 139472888
53 Treponema pallidum 1 Treponema pallidum subsp. pallidum DAL-1 NC_016844 378974633
2 Treponema pallidum subsp. pallidum SS14 NC_010741 189025236
3 Treponema pallidum subsp. pallidum str. Chicago NC_017268 384421554
4 Treponema pallidum subsp. pallidum str. Nichols NC_000919 15638995
5 Treponema pallidum subsp. pertenue str. CDC2 NC_016848 378981476
6 Treponema pallidum subsp. pertenue str. Gauthier NC_016843 378973567
7 Treponema pallidum subsp. pertenue str. SamoaD NC_016842 378972501
54 Vibrio 1 Vibrio agarivorans NR_028946 265678641
2 Vibrio alginolyticus NR_044825 343206233
3 Vibrio alginolyticus pVAE259 NC_013178 257070394
4 Vibrio anguillarum 775 I NC_015633 336122587
5 Vibrio anguillarum 775 II NC_015637 336125405
6 Vibrio anguillarum 775 pJM1 NC_005250 38638317
7 Vibrio cholerae NR_044853 343206261
8 Vibrio cholerae pSIO1 NC_006860 60202126
9 Vibrio cholerae pTLC NC_004982 32455390
10 Vibrio cholerae pVCG1.1 NC_010897 190570447
11 Vibrio cholerae pVCG1.2 NC_010899 190570453
12 Vibrio cholerae pVCG4.1 NC_010910 190570458
13 Vibrio cholerae IEC224 I NC_016944 379739908
14 Vibrio cholerae IEC224 II NC_016945 379743460
15 Vibrio cholerae LMA3984-4 I NC_017270 384423362
16 Vibrio cholerae LMA3984-4 II NC_017269 384422536
17 Vibrio cholerae M66-2 I NC_012578 227080237
18 Vibrio cholerae M66-2 II NC_012580 227811634
19 Vibrio cholerae MJ-1236 1 NC_012668 229606122
20 Vibrio cholerae MJ-1236 2 NC_012667 229605062
21 Vibrio cholerae O1 biovar eltor str. N16961 I NC_002505 15640032 gvc
22 Vibrio cholerae O1 biovar eltor str. N16961 II NC_002506 15600771 gvc
23 Vibrio cholerae O1 str. 2010EL-1786 1 NC_016445 360034408
24 Vibrio cholerae O1 str. 2010EL-1786 2 NC_016446 360037214
25 Vibrio cholerae O395 1 NC_009456 147671401
26 Vibrio cholerae O395 2 NC_009457 147673035
27 Vibrio cholerae O395 I NC_012582 227116370
28 Vibrio cholerae O395 II NC_012583 227119188
29 Vibrio fischeri ES114 I NC_006840 172087630 ntvf01
30 Vibrio fischeri ES114 II NC_006841 172087787 ntvf01
31 Vibrio fischeri ES114 pES100 NC_006842 59714356 ntvf01
32 Vibrio fischeri MJ11 I NC_011184 197333880
33 Vibrio fischeri MJ11 II NC_011186 197336667
34 Vibrio fischeri MJ11 pMJ100 NC_011185 197336471
35 Vibrio fluvialis NR_036790 310974926
36 Vibrio fluvialis pBD146 NC_011797 219372116
37 Vibrio furnissii NR_037067 310975203
38 Vibrio furnissii NCTC 11218 1 NC_016602 375129161
39 Vibrio furnissii NCTC 11218 2 NC_016628 375132168
40 Vibrio gallaecicus NR_044520 343199085
41 Vibrio harveyi ATCC BAA-1116 I NC_009783 156972381
42 Vibrio harveyi ATCC BAA-1116 II NC_009784 156975952
43 Vibrio harveyi ATCC BAA-1116 pVIBHAR NC_009777 156936674
44 Vibrio ichthyoenteri NR_042122 343201396
45 Vibrio lentus NR_028926 265678621
46 Vibrio mytili NR_044911 343206319
47 Vibrio nigripulchritudo pSFn1 NC_010733 189022202
48 Vibrio nigripulchritudo VIBNI_pA NC_015156 326325966
49 Vibrio ordalii ATCC 33509 NR_044851 343206259
50 Vibrio parahaemolyticus pO3K6 NC_002473 10955964
51 Vibrio parahaemolyticus pSA19 NC_002088 10955963
52 Vibrio parahaemolyticus pZY5 NC_012859 242134074
53 Vibrio parahaemolyticus RIMD 2210633 I NC_004603 28896774 ntvp01
54 Vibrio parahaemolyticus RIMD 2210633 II NC_004605 28899855 ntvp01
55 Vibrio penaeicida NR_042121 343201395
56 Vibrio phage CTX I NC_015209 332672294
57 Vibrio phage fs1 NC_004306 23455823
58 Vibrio phage fs2 NC_001956 9630761
59 Vibrio phage ICP1 NC_015157 325170966
60 Vibrio phage ICP2 NC_015158 325171199
61 Vibrio phage ICP3 NC_015159 325171272
62 Vibrio phage K139 NC_003313 17975105
63 Vibrio phage kappa NC_010275 165970234
64 Vibrio phage KSF-1phi NC_006294 52221121
65 Vibrio phage KVP40 NC_005083 91214232
66 Vibrio phage N4 NC_013651 281416165
67 Vibrio phage SIO-2 NC_016567 371496326
68 Vibrio phage VCY-phi NC_016162 358356470
69 Vibrio phage VEJphi NC_012757 238821372
70 Vibrio phage Vf12 NC_005949 49248530
71 Vibrio phage Vf33 NC_005948 49248521
72 Vibrio phage VfO3K6 NC_002362 9635467
73 Vibrio phage VfO4K68 NC_002363 9635478
74 Vibrio phage VGJphi NC_004736 30039743
75 Vibrio phage VHML NC_004456 27311175
76 Vibrio phage VP2 NC_005879 48696638
77 Vibrio phage VP5 NC_005891 48696682
78 Vibrio phage VP882 NC_009016 126010846
79 Vibrio phage VP93 NC_012662 229604924
80 Vibrio phage VpV262 NC_003907 27151468
81 Vibrio phage VSK NC_003327 26114633
82 Vibrio rotiferianus NR_042081 343201355
83 Vibrio shilonii pAK1 NC_010734 189022213
84 Vibrio sp. 09022 p09022A NC_010114 161789270
85 Vibrio sp. 0908 p0908 NC_010113 161789109
86 Vibrio sp. 23023 p23023 NC_010112 161789205
87 Vibrio sp. 41 pPS41 NC_004961 32455895
88 Vibrio sp. EJY3 1 NC_016613 375264031
89 Vibrio sp. EJY3 2 NC_016614 375262319
90 Vibrio sp. Ex25 1 NC_013456 262392383
91 Vibrio sp. Ex25 2 NC_013457 262395299
92 Vibrio sp. LMG 19839 NR_042082 343201356
93 Vibrio sp. TC68 pTC68 NC_008690 119633060
94 Vibrio splendidus LGP32 1 NC_011753 294514841
95 Vibrio splendidus LGP32 2 NC_011744 294510242
96 Vibrio tapetis pVT1 NC_010614 187729868
97 Vibrio vulnificus NR_036888 310975024
98 Vibrio vulnificus pC4602-1 NC_009702 153971581
99 Vibrio vulnificus pC4602-2 NC_009703 153971667
100 Vibrio vulnificus pMP1 NC_012758 238899401
101 Vibrio vulnificus pR99 NC_009701 153971488
102 Vibrio vulnificus CMCP6 I NC_004459 326423644 ntvv01
103 Vibrio vulnificus CMCP6 II NC_004460 326424156 ntvv01
104 Vibrio vulnificus MO6-24/O I NC_014965 320154846
105 Vibrio vulnificus MO6-24/O II NC_014966 320157827
106 Vibrio vulnificus YJ016 I NC_005139 37678184 ntvv02
107 Vibrio vulnificus YJ016 II NC_005140 37675660 ntvv02
108 Vibrio vulnificus YJ016 pYJ016 NC_005128 37595821 ntvv02
55 Yersinia enterocolitica 1 Yersinia enterocolitica p29807 NC_005570 42761421
2 Yersinia enterocolitica pYe4449-1 NC_012208 224985746
3 Yersinia enterocolitica pYe4449-2 NC_012209 224992331
4 Yersinia enterocolitica pYE854 NC_010377 169544164
5 Yersinia enterocolitica pYVa127/90 NC_004564 28372983
6 Yersinia enterocolitica pYVe227 NC_002120 10955536
7 Yersinia enterocolitica pYVe8081 NC_005017 32470270
8 Yersinia enterocolitica subsp. enterocolitica 8081 NC_008800 123440403
9 Yersinia enterocolitica subsp. enterocolitica 8081 pYVe8081 NC_008791 122815790
10 Yersinia enterocolitica subsp. palearctica 105.5R(r) NC_015224 332159624
11 Yersinia enterocolitica subsp. palearctica 105.5R(r) 105.5R(r)p NC_015475 332163560
12 Yersinia enterocolitica subsp. palearctica Y11 NC_017564 386307442
13 Yersinia enterocolitica subsp. palearctica Y11 pYV03 NC_017565 386307331
56 Yersinia pestis 1 Yersinia pestis pG8786 NC_006323 52788052
2 Yersinia pestis pYC NC_002144 10955834
3 Yersinia pestis A1122 NC_017168 384137007
4 Yersinia pestis A1122 unnamed NC_017169 384141139
5 Yersinia pestis A1122 unnamed NC_017170 384136996
6 Yersinia pestis Angola NC_010159 162418099
7 Yersinia pestis Angola new_pCD NC_010157 162417732
8 Yersinia pestis Angola pMT-pPCP NC_010158 162417821
9 Yersinia pestis Antiqua NC_008150 108805998
10 Yersinia pestis Antiqua pCD NC_008122 108793642
11 Yersinia pestis Antiqua pMT NC_008120 108793532
12 Yersinia pestis Antiqua pPCP NC_008121 108793632
13 Yersinia pestis biovar Medievalis str. Harbin 35 NC_017265 384412706
14 Yersinia pestis biovar Medievalis str. Harbin 35 pCD NC_017263 384412639
15 Yersinia pestis biovar Medievalis str. Harbin 35 pMT NC_017266 384416964
16 Yersinia pestis biovar Medievalis str. Harbin 35 pPCP NC_017264 384412693
17 Yersinia pestis biovar Microtus str. 91001 NC_005810 45439865 ntyp04
18 Yersinia pestis biovar Microtus str. 91001 pCD1 NC_005813 45478502 ntyp04
19 Yersinia pestis biovar Microtus str. 91001 pCRY NC_005814 45476499 ntyp04
20 Yersinia pestis biovar Microtus str. 91001 pMT1 NC_005815 45478588 ntyp04
21 Yersinia pestis biovar Microtus str. 91001 pPCP1 NC_005816 45478711 ntyp04
22 Yersinia pestis biovar Orientalis str. IP275 pIP1202 NC_009141 134044743
23 Yersinia pestis CA88-4125 pCD1 NC_009595 149192647
24 Yersinia pestis CA88-4125 pMT1 NC_009596 149192721
25 Yersinia pestis CO92 NC_003143 16120353 ntyp01
26 Yersinia pestis CO92 pCD1 NC_003131 16082691 ntyp01
27 Yersinia pestis CO92 pMT1 NC_003134 16082781 ntyp01
28 Yersinia pestis CO92 pPCP1 NC_003132 16082679 ntyp01
29 Yersinia pestis D106004 NC_017154 384120592
30 Yersinia pestis D106004 pCD1 NC_017153 384120524
31 Yersinia pestis D106004 pMT1 NC_017155 384124222
32 Yersinia pestis D106004 pPCY1 NC_017156 384124299
33 Yersinia pestis D182038 NC_017160 384124469
34 Yersinia pestis D182038 pCD1 NC_017157 384124319
35 Yersinia pestis D182038 pMT1 NC_017158 384124388
36 Yersinia pestis D182038 pPCP1 NC_017159 384124309
37 Yersinia pestis Java 9 pCD NC_015056 322836495
38 Yersinia pestis Java 9 pJARS35 NC_015054 322836612
39 Yersinia pestis Java 9 pJARS36 NC_015068 322836657
40 Yersinia pestis Java 9 pPCP NC_015055 322836709
41 Yersinia pestis KIM NC_004088 22123922 ntyp02
42 Yersinia pestis KIM pCD1 NC_004839 31795449 ntyp02
43 Yersinia pestis KIM pCD1 NC_004836 31795262 ntyp02
44 Yersinia pestis KIM pMT-1 NC_004838 31795333 ntyp02
45 Yersinia pestis KIM pMT1 NC_004835 31795183 ntyp02
46 Yersinia pestis KIM pPCP1 NC_004837 31795327 ntyp02
47 Yersinia pestis Nepal516 NC_008149 108810166 ntyp06
48 Yersinia pestis Nepal516 pMT NC_008118 108793732 ntyp06
49 Yersinia pestis Nepal516 pPCP NC_008119 108793837 ntyp06
50 Yersinia pestis Pestoides F NC_009381 145597324
51 Yersinia pestis Pestoides F CD NC_009377 145597103
52 Yersinia pestis Pestoides F MT NC_009378 145597192
53 Yersinia pestis Z176003 NC_014029 294502110
54 Yersinia pestis Z176003 pCD1 NC_014017 294496807
55 Yersinia pestis Z176003 pMT1 NC_014022 294501992
56 Yersinia pestis Z176003 pPCP1 NC_014027 294509193
57 Yersinia phage phiA1122 NC_004777 30387453
57 Yersinia pseudotuberculosis 1 Yersinia pseudotuberculosis pGDT4 NC_011759 218534615
2 Yersinia pseudotuberculosis IP 31758 NC_009708 153946813
3 Yersinia pseudotuberculosis IP 31758 plasmid_153kb NC_009705 153930630
4 Yersinia pseudotuberculosis IP 31758 plasmid_59kb NC_009704 153930562
5 Yersinia pseudotuberculosis IP 32953 NC_006155 51594359
6 Yersinia pseudotuberculosis IP 32953 pYptb32953 NC_006154 51593942
7 Yersinia pseudotuberculosis IP 32953 pYV NC_006153 113911685
8 Yersinia pseudotuberculosis PB1/+ NC_010634 186893344
9 Yersinia pseudotuberculosis PB1/+ pYPTS01 NC_010635 186897495
10 Yersinia pseudotuberculosis YPIII NC_010465 170022262
58 Yersinia ruckeri 1 Yersinia ruckeri pYR1 NC_009139 134044452

Table 2. Viral genomes included in PHIDIAS PGBrowser and BLAST libraries.

Pathogen species Strains Segment Genome Accession Nuccore ID CMR
1 African swine fever virus 1 African swine fever virus NC_001659 9628113
2 Crimean-Congo hemorrhagic fever virus 1 Crimean-Congo hemorrhagic fever virus L NC_005301 76364065
2 Crimean-Congo hemorrhagic fever virus M NC_005300 75905471
3 Crimean-Congo hemorrhagic fever virus S NC_005302 39840949
3 Cryptosporidium parvum 1 Cryptosporidium parvum Iowa II NC_006980 66363675
2 Cryptosporidium parvum Iowa II NC_006981 66509336
3 Cryptosporidium parvum Iowa II NC_006982 66509347
4 Cryptosporidium parvum Iowa II NC_006983 66509370
5 Cryptosporidium parvum Iowa II NC_006984 66509392
6 Cryptosporidium parvum Iowa II NC_006985 66671299
7 Cryptosporidium parvum Iowa II NC_006986 66363676
8 Cryptosporidium parvum Iowa II NC_006987 66509416
4 Eastern equine encephalitis virus 1 Eastern equine encephalitis virus NC_003899 21218484
6 Foot-and-mouth disease virus 1 Foot-and-mouth disease virus - type A NC_011450 48429536
2 Foot-and-mouth disease virus - type Asia 1 NC_004915 32188257
3 Foot-and-mouth disease virus - type C NC_002554 10445391
4 Foot-and-mouth disease virus - type O NC_004004 21426907
5 Foot-and-mouth disease virus - type SAT 1 NC_011451 48429537
6 Foot-and-mouth disease virus - type SAT 2 NC_003992 48477070
7 Foot-and-mouth disease virus - type SAT 3 NC_011452 48429538
7 Guanarito virus 1 Guanarito virus segment L NC_005082 34365541
2 Guanarito virus segment S NC_005077 34365538
8 Hantavirus 1 Andes virus Segment L NC_003468 23464594
2 Andes virus Segment M NC_003467 23464593
3 Andes virus Segment S NC_003466 19744949
4 Dobrava-Belgrade virus segment L NC_005235 38505527
5 Dobrava-Belgrade virus segment M NC_005234 38505525
6 Dobrava-Belgrade virus segment S NC_005233 38505523
7 Hantaan virus L NC_005222 38371716
8 Hantaan virus segment M NC_005219 38371712
9 Hantaan virus segment S NC_005218 38371710
10 Hantavirus Z10 segment L NC_006435 55733703
11 Hantavirus Z10 segment M NC_006437 55733705
12 Hantavirus Z10 segment S NC_006433 55733701
13 Puumala virus L NC_005225 38371722
14 Puumala virus segment M NC_005223 38371718
15 Puumala virus segment S NC_005224 38371720
16 Seoul virus L NC_005238 38505533
17 Seoul virus M NC_005237 38505531
18 Seoul virus segment S NC_005236 38505529
19 Sin Nombre virus segment L NC_005217 38371727
20 Sin Nombre virus segment M NC_005215 38371723
21 Sin Nombre virus segment S NC_005216 38371725
22 Thottapalayam virus L NC_010707 188543069
23 Thottapalayam virus M NC_010708 188543102
24 Thottapalayam virus S NC_010704 188543036
25 Tula virus segment L NC_005226 38488686
26 Tula virus segment M NC_005228 38488690
27 Tula virus segment S NC_005227 356457881
9 Hepatitis A virus 1 Duck hepatitis A virus 1 NC_008250 110611894
2 Duck hepatitis A virus 3 NC_009750 156519332
3 Hepatitis A virus NC_001489 9626732
10 Hepatitis B virus 1 Duck hepatitis B virus NC_001344 9625568
2 Hepatitis B virus NC_003977 21326584
3 Heron hepatitis B virus NC_001486 9626719
4 Parrot hepatitis B virus NC_016561 372220275
5 Ross's goose hepatitis B virus NC_005888 48696604
6 Sheldgoose hepatitis B virus NC_005890 48696569
7 Snow goose hepatitis B virus NC_005950 49246207
11 Herpesvirus 1 Abalone herpesvirus Taiwan/2004 NC_016438 359745340
2 Alcelaphine herpesvirus 1 NC_002531 10140926
3 Anatid herpesvirus 1 NC_013036 255683134
4 Anguillid herpesvirus 1 NC_013668 388262476
5 Aotine herpesvirus 1 NC_016447 360040900
6 Ateline herpesvirus 3 NC_001987 9631195
7 Bovine herpesvirus 1 NC_001847 9629818
8 Bovine herpesvirus 4 NC_002665 13095578
9 Bovine herpesvirus 5 NC_005261 123318702
10 Callitrichine herpesvirus 3 NC_004367 24943089
11 Caviid herpesvirus 2 NC_011587 213159161
12 Cercopithecine herpesvirus 2 NC_006560 56694721
13 Cercopithecine herpesvirus 5 NC_012783 359946431
14 Cercopithecine herpesvirus 9 NC_002686 126882977
15 Cyprinid herpesvirus 3 NC_009127 131840030
16 Equid herpesvirus 1 NC_001491 50313241
17 Equid herpesvirus 2 NC_001650 9628002
18 Equid herpesvirus 4 NC_001844 9629732
19 Equid herpesvirus 8 NC_017826 386522723
20 Equid herpesvirus 9 NC_011644 216905852
21 Felid herpesvirus 1 NC_013590 281190771
22 Gallid herpesvirus 1 NC_006623 57790931
23 Gallid herpesvirus 2 NC_002229 125745044
24 Gallid herpesvirus 3 NC_002577 10834856
25 Human herpesvirus 1 NC_001806 9629378
26 Human herpesvirus 2 NC_001798 9629267
27 Human herpesvirus 4 NC_007605 82503188
28 Human herpesvirus 4 type 2 NC_009334 139424470
29 Human herpesvirus 5 NC_006273 155573622
30 Human herpesvirus 6 NC_001664 224020395
31 Human herpesvirus 6 NC_000898 9633069
32 Human herpesvirus 7 NC_001716 51874225
33 Human herpesvirus 8 NC_009333 139472801
34 Ictalurid herpesvirus 1 NC_001493 9626821
35 Macacine herpesvirus 1 NC_004812 30984428
36 Macacine herpesvirus 3 NC_006150 51556461
37 Macacine herpesvirus 4 NC_006146 51518014
38 Meleagrid herpesvirus 1 NC_002641 12084824
39 Murid herpesvirus 1 NC_004065 21716071
40 Murid herpesvirus 2 NC_002512 20198505
41 Murid herpesvirus 4 NC_001826 146261990
42 Ostreid herpesvirus 1 NC_005881 48696722
43 Ovine herpesvirus 2 NC_007646 83642839
44 Panine herpesvirus 2 NC_003521 20026600
45 Papiine herpesvirus 2 NC_007653 83722567
46 Psittacid herpesvirus 1 NC_005264 38638196
47 Ranid herpesvirus 1 NC_008211 109638461
48 Ranid herpesvirus 2 NC_008210 109638594
49 Rodent herpesvirus Peru NC_015049 321496547
50 Saimiriine herpesvirus 1 NC_014567 312162798
51 Saimiriine herpesvirus 2 NC_001350 9625955
52 Saimiriine herpesvirus 3 NC_016448 360086494
53 Suid herpesvirus 1 NC_006151 51557483
54 Tupaiid herpesvirus 1 NC_002794 14250967
12 Human immunodeficiency virus 1 Human immunodeficiency virus 1 NC_001802 9629357
2 Human immunodeficiency virus 2 NC_001722 9628880
13 Human papillomavirus 1 Alphapapillomavirus 13 NC_001676 9628437
2 Alphapapillomavirus 3 NC_001694 9628574
3 Alphapapillomavirus 4 NC_001352 9626032
4 Alphapapillomavirus 7 NC_001357 9626069
5 Human papillomavirus 101 NC_008189 109390389
6 Human papillomavirus 109 NC_012485 225927560
7 Human papillomavirus 112 NC_012486 225927568
8 Human papillomavirus 116 NC_013035 254810663
9 Human papillomavirus 121 NC_014185 297342356
10 Human papillomavirus type 10 NC_001576 9627257
11 Human papillomavirus type 103 NC_008188 109390382
12 Human papillomavirus type 108 NC_012213 224983322
13 Human papillomavirus type 126 NC_016157 358356460
14 Human papillomavirus type 128 NC_014952 319976684
15 Human papillomavirus type 129 NC_014953 319976676
16 Human papillomavirus type 131 NC_014954 319976668
17 Human papillomavirus type 132 NC_014955 319962668
18 Human papillomavirus type 134 NC_014956 319962660
19 Human papillomavirus type 135 NC_017993 389656400
20 Human papillomavirus type 136 NC_017994 389656408
21 Human papillomavirus type 137 NC_017995 389656416
22 Human papillomavirus type 140 NC_017996 389656424
23 Human papillomavirus type 144 NC_017997 389656432
24 Human papillomavirus type 16 NC_001526 310698439
25 Human papillomavirus type 26 NC_001583 9627305
26 Human papillomavirus type 32 NC_001586 9627327
27 Human papillomavirus type 34 NC_001587 9627334
28 Human papillomavirus type 4 NC_001457 9626597
29 Human papillomavirus type 41 NC_001354 9626041
30 Human papillomavirus type 48 NC_001690 9628542
31 Human papillomavirus type 49 NC_001591 9627363
32 Human papillomavirus type 5 NC_001531 9627145
33 Human papillomavirus type 50 NC_001691 9628550
34 Human papillomavirus type 53 NC_001593 9627377
35 Human papillomavirus type 60 NC_001693 9628566
36 Human papillomavirus type 63 NC_001458 9626605
37 Human papillomavirus type 6b NC_001355 9626053
38 Human papillomavirus type 7 NC_001595 9627389
39 Human papillomavirus type 88 NC_010329 167600365
40 Human papillomavirus type 9 NC_001596 9627396
41 Human papillomavirus type 90 NC_004104 22138122
42 Human papillomavirus type 92 NC_004500 27531786
43 Human papillomavirus type 96 NC_005134 50253426
44 Mupapillomavirus 1 NC_001356 9626063
15 Japanese encephalitis virus 1 Japanese encephalitis virus NC_001437 9626460
16 Junin virus 1 Junin virus segment L NC_005080 34365526
2 Junin virus segment S NC_005081 34365529
17 Lake Victoria marburgvirus 1 Lake Victoria marburgvirus NC_001608 158539108
18 Lassa virus 1 Lassa virus segment L NC_004297 23343512
2 Lassa virus segment S NC_004296 23343509
3 Mopeia Lassa reassortant 29 L NC_006572 56699498
4 Mopeia Lassa reassortant 29 S NC_006573 56699501
19 Louping ill virus 1 Louping ill virus NC_001809 9629456
20 Machupo virus 1 Machupo virus segment L NC_005079 34365535
2 Machupo virus segment S NC_005078 34365532
22 Measles virus 1 Measles virus NC_001498 9626945
23 Mumps virus 1 Mumps virus NC_002200 9695415
24 Newcastle disease virus 1 Newcastle disease virus NC_002617 11545722
25 Poliovirus 1 Human enterovirus 109 NC_014336 301349453
2 Human enterovirus C NC_001428 9626433
3 Poliovirus NC_002058 12408699
26 Powassan virus 1 Powassan virus NC_003687 20260779
27 Rabies virus 1 Rabies virus NC_001542 9627197
28 Reston ebolavirus 1 Reston ebolavirus NC_004161 22789222
29 Rift Valley fever virus 1 Rift Valley fever virus segment L NC_002043 9632361
2 Rift Valley fever virus segment L NC_014397 302596920
3 Rift Valley fever virus segment M NC_002044 27881463
4 Rift Valley fever virus segment M NC_014396 302596922
5 Rift Valley fever virus segment S NC_002045 9632365
6 Rift Valley fever virus segment S NC_014395 302596924
30 Rotavirus 1 Adult diarrheal rotavirus strain J19 NC_007558 78768152
2 Adult diarrheal rotavirus strain J19 NC_007557 78767973
3 Adult diarrheal rotavirus strain J19 NC_007556 78767825
4 Adult diarrheal rotavirus strain J19 NC_007555 78767691
5 Adult diarrheal rotavirus strain J19 NC_007554 78767504
6 Adult diarrheal rotavirus strain J19 NC_007553 78767273
7 Adult diarrheal rotavirus strain J19 NC_007552 78767039
8 Adult diarrheal rotavirus strain J19 NC_007551 78766821
9 Adult diarrheal rotavirus strain J19 NC_007550 78766647
10 Adult diarrheal rotavirus strain J19 NC_007549 78766369
11 Adult diarrheal rotavirus strain J19 NC_007548 78765373
12 Rotavirus A 1 NC_011507 352950882
13 Rotavirus A 10 NC_011504 353072697
14 Rotavirus A 11 NC_011505 353072704
15 Rotavirus A 2 NC_011506 352950881
16 Rotavirus A 3 NC_011508 352950883
17 Rotavirus A 4 NC_011510 351694292
18 Rotavirus A 5 NC_011500 352950877
19 Rotavirus A 6 NC_011509 352950884
20 Rotavirus A 7 NC_011502 352950879
21 Rotavirus A 8 NC_011501 352950878
22 Rotavirus A 9 NC_011503 352950880
23 Rotavirus C 1 NC_007547 81097459
24 Rotavirus C 10 NC_007569 81097465
25 Rotavirus C 11 NC_007573 78761397
26 Rotavirus C 2 NC_007546 80984706
27 Rotavirus C 3 NC_007572 81097461
28 Rotavirus C 4 NC_007574 81097463
29 Rotavirus C 5 NC_007570 81042249
30 Rotavirus C 6 NC_007543 81022919
31 Rotavirus C 7 NC_007544 81021557
32 Rotavirus C 8 NC_007571 81054207
33 Rotavirus C 9 NC_007545 81002246
34 Rotavirus D chicken/05V0049/DEU/2005 1 NC_014511 307347003
35 Rotavirus D chicken/05V0049/DEU/2005 10 NC_014520 307346984
36 Rotavirus D chicken/05V0049/DEU/2005 11 NC_014521 307346982
37 Rotavirus D chicken/05V0049/DEU/2005 2 NC_014512 307347001
38 Rotavirus D chicken/05V0049/DEU/2005 3 NC_014513 307346999
39 Rotavirus D chicken/05V0049/DEU/2005 4 NC_014514 307346997
40 Rotavirus D chicken/05V0049/DEU/2005 5 NC_014515 307346995
41 Rotavirus D chicken/05V0049/DEU/2005 6 NC_014516 307346993
42 Rotavirus D chicken/05V0049/DEU/2005 7 NC_014517 307346991
43 Rotavirus D chicken/05V0049/DEU/2005 8 NC_014518 307346989
44 Rotavirus D chicken/05V0049/DEU/2005 9 NC_014519 307346987
31 Rubella virus 1 Rubella virus NC_001545 336284682
32 Vaccinia virus 1 Vaccinia virus NC_006998 66275797
33 Varicella-zoster virus 1 Human herpesvirus 3 NC_001348 9625875
34 Variola virus 1 Variola virus NC_001611 9627521
35 Venezuelan equine encephalitis virus 1 Venezuelan equine encephalitis virus NC_001449 9626526
36 Western equine encephalitis virus 1 Western equine encephalomyelitis virus NC_003908 21238454
37 Yellow fever virus 1 Yellow fever virus NC_002031 9627244