PHIDIAS: Pathogen-Host Interaction Data Integration and Analysis System

Phinet Name: Salmonella spp.
Phinet Information
Pathogen Name: Salmonella spp.
Pathogen NIAID Category: NIAID Category B
Bio-objects
Bio-object 1: Cell apoptosis induction
Type: Location: Description:
Bio-object 2: Cytoskeletal actin modification
Type: Location: Description:
Bio-object 3: Cytoskeletal rearrangements
Type: Location: Description:
Bio-object 4: Modification of Rac, Cdc Rho GTPases
Type: Location: Function: Description:
Bio-object 5: Needle like structure formation
Type: Location: Function: Description:
Bio-object 6: PrgI, PrgJ proteins secretion
Type: Location: Function: Description:
Bio-object 7: Salmonella in vacuole. SseB, C, D proteins secretion
Type: Location: Description:
Bio-object 8: Salmonella in vacuole. Type III Secretion System 2
Type: Location: Function: Description:
Bio-object 9: Salmonella internalization in vacuole
Type: Location: Description:
Bio-object 10: Salmonella Intracellular proliferation
Type: Location: Description:
Bio-object 11: Salmonella intracellular survival and replication
Type: Location: Description:
Bio-object 12: Salmonella systemic spread
Type: Location: Description:
Bio-object 13: SipA, B, C, D translocation into the host cells
Type: Location: Function: Description:
Bio-object 14: SopA, B, D, E translocation into the host cells
Type: Location: Function: Description:
Bio-object 15: Type III Secretion System 1
Type: Location: Function: Description:
Interactions
Interaction 1: Interaction1
Input Objects: Type III Secretion System 1 Output Objects: PrgI, PrgJ proteins secretion GO Evidence Code: Inferred from Direct Assay Description:
Interaction 2: Interaction2
Input Objects: PrgI, PrgJ proteins secretion Output Objects: Needle like structure formation GO Evidence Code: Inferred from Direct Assay Description:
Interaction 3: Interaction3
Input Objects: Needle like structure formation Output Objects: SipA, B, C, D translocation into the host cells GO Evidence Code: Inferred from Direct Assay Description:
Interaction 4: Interaction4
Input Objects: SipA, B, C, D translocation into the host cells Output Objects: SopA, B, D, E translocation into the host cells GO Evidence Code: Inferred from Direct Assay Description:
Interaction 5: Interaction5
Input Objects: SopA, B, D, E translocation into the host cells Output Objects: Modification of Rac, Cdc Rho GTPases GO Evidence Code: Inferred from Direct Assay Description:
Interaction 6: Interaction6
Input Objects: Modification of Rac, Cdc Rho GTPases Output Objects: Cytoskeletal actin modification GO Evidence Code: Inferred from Direct Assay Description:
Interaction 7: Interaction7
Input Objects: Cytoskeletal actin modification Output Objects: Cytoskeletal rearrangements GO Evidence Code: Inferred from Direct Assay Description:
Interaction 8: Interaction8
Input Objects: Cytoskeletal rearrangements Output Objects: Cell apoptosis induction GO Evidence Code: Inferred from Direct Assay Description:
Interaction 9: Interaction9
Input Objects: Cell apoptosis induction Output Objects: Salmonella internalization in vacuole GO Evidence Code: Inferred from Direct Assay Description:
Interaction 10: Interaction10
Input Objects: Salmonella internalization in vacuole Output Objects: Salmonella intracellular survival and replication GO Evidence Code: Inferred from Direct Assay Description:
Interaction 11: Interaction11
Input Objects: Salmonella intracellular survival and replication Output Objects: Salmonella in vacuole. Type III Secretion System 2 GO Evidence Code: Inferred from Direct Assay Description:
Interaction 12: Interaction12
Input Objects: Salmonella in vacuole. Type III Secretion System 2 Output Objects: Salmonella in vacuole. SseB, C, D proteins secretion GO Evidence Code: Inferred from Direct Assay Description:
Interaction 13: Interaction13
Input Objects: Salmonella in vacuole. SseB, C, D proteins secretion Output Objects: Salmonella Intracellular proliferation GO Evidence Code: Inferred from Direct Assay Description:
Interaction 14: Interaction14
Input Objects: Salmonella Intracellular proliferation Output Objects: Salmonella systemic spread GO Evidence Code: Inferred from Direct Assay Description:
Pathways

Phinet Name: Salmonella spp.